RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 FBLIM1Q8WUP2 373 aa14.06□□□□□ -0.16
SSSCA1-206ENST00000531405 PTX4Q96A99 478 aa14.06□□□□□ -0.16
SSSCA1-206ENST00000531405 GFI1Q99684 422 aa14.06□□□□□ -0.16
SSSCA1-206ENST00000531405 FOXI3A8MTJ6 420 aaPredicted RBP14.05□□□□□ -0.16
SSSCA1-206ENST00000531405 M0R1X1 148 aa14.05□□□□□ -0.16
SSSCA1-206ENST00000531405 IGLV2-23P01705 113 aa14.05□□□□□ -0.16
SSSCA1-206ENST00000531405 TRBV12-3P01733 135 aa14.05□□□□□ -0.16
SSSCA1-206ENST00000531405 APOA2P02652 100 aa14.05□□□□□ -0.16
SSSCA1-206ENST00000531405 CD37P11049 281 aa14.05□□□□□ -0.16
SSSCA1-206ENST00000531405 SYNJ2BPP57105 145 aa14.05□□□□□ -0.16
SSSCA1-206ENST00000531405 HAGHQ16775 308 aa14.05□□□□□ -0.16
SSSCA1-206ENST00000531405 OR9G4Q8NGQ1 327 aa14.05□□□□□ -0.16
SSSCA1-206ENST00000531405 SPATA25Q9BR10 227 aa14.05□□□□□ -0.16
SSSCA1-206ENST00000531405 MND1Q9BWT6 205 aa14.05□□□□□ -0.16
SSSCA1-206ENST00000531405 C12orf4Q9NQ89 552 aa14.05□□□□□ -0.16
SSSCA1-206ENST00000531405 SLC35D1Q9NTN3 355 aa14.05□□□□□ -0.16
SSSCA1-206ENST00000531405 RDH8Q9NYR8 311 aa14.05□□□□□ -0.16
SSSCA1-206ENST00000531405 PLECQ15149 4684 aaKnown RBP14.05□□□□□ -0.16
SSSCA1-206ENST00000531405 A0A0G2JLM5 398 aa14.04□□□□□ -0.16
SSSCA1-206ENST00000531405 H3BUA1 57 aa14.04□□□□□ -0.16
SSSCA1-206ENST00000531405 UCHL1P09936 223 aa14.04□□□□□ -0.16
SSSCA1-206ENST00000531405 APELAP0DMC3 54 aa14.04□□□□□ -0.16
SSSCA1-206ENST00000531405 TMEM50BP56557 158 aa14.04□□□□□ -0.16
SSSCA1-206ENST00000531405 FAM89BQ8N5H3 189 aa14.04□□□□□ -0.16
SSSCA1-206ENST00000531405 ARHGAP5-AS1Q96IT6 56 aa14.04□□□□□ -0.16
SSSCA1-206ENST00000531405 URM1Q9BTM9 101 aaKnown RBP14.04□□□□□ -0.16
SSSCA1-206ENST00000531405 C8orf4Q9NR00 106 aa14.04□□□□□ -0.16
SSSCA1-206ENST00000531405 MGAT4AQ9UM21 535 aa14.04□□□□□ -0.16
SSSCA1-206ENST00000531405 LSM2Q9Y333 95 aaKnown RBP14.04□□□□□ -0.16
SSSCA1-206ENST00000531405 CDK1P06493 297 aa14.03□□□□□ -0.16
SSSCA1-206ENST00000531405 CD3GP09693 182 aa14.03□□□□□ -0.16
SSSCA1-206ENST00000531405 VEGFCP49767 419 aa14.03□□□□□ -0.16
SSSCA1-206ENST00000531405 TMEM203Q969S6 136 aa14.03□□□□□ -0.16
SSSCA1-206ENST00000531405 CMSS1Q9BQ75 279 aaKnown RBP14.03□□□□□ -0.16
SSSCA1-206ENST00000531405 THAP7Q9BT49 309 aaPredicted RBP14.03□□□□□ -0.16
SSSCA1-206ENST00000531405 PECRQ9BY49 303 aa14.03□□□□□ -0.16
SSSCA1-206ENST00000531405 PLGRKTQ9HBL7 147 aa14.03□□□□□ -0.16
SSSCA1-206ENST00000531405 HSF4Q9ULV5 492 aa14.03□□□□□ -0.16
SSSCA1-206ENST00000531405 IZUMO1RA6ND01 250 aa14.02□□□□□ -0.17
SSSCA1-206ENST00000531405 H0Y980 276 aa14.02□□□□□ -0.17
SSSCA1-206ENST00000531405 RBMXL2O75526 392 aaKnown RBP14.02□□□□□ -0.17
SSSCA1-206ENST00000531405 CRYGBP07316 175 aa14.02□□□□□ -0.17
SSSCA1-206ENST00000531405 CLDN12P56749 244 aa14.02□□□□□ -0.17
SSSCA1-206ENST00000531405 RCN1Q15293 331 aa14.02□□□□□ -0.17
SSSCA1-206ENST00000531405 SPHARQ15513 63 aa14.02□□□□□ -0.17
SSSCA1-206ENST00000531405 MED22Q15528 200 aa14.02□□□□□ -0.17
SSSCA1-206ENST00000531405 PLAC9Q5JTB6 97 aa14.02□□□□□ -0.17
SSSCA1-206ENST00000531405 LIPKQ5VXJ0 399 aa14.02□□□□□ -0.17
SSSCA1-206ENST00000531405 HARBI1Q96MB7 349 aa14.02□□□□□ -0.17
SSSCA1-206ENST00000531405 TINAGL1Q9GZM7 467 aaPredicted RBP14.02□□□□□ -0.17
SSSCA1-206ENST00000531405 OR2D2Q9H210 308 aa14.02□□□□□ -0.17
SSSCA1-206ENST00000531405 RETNQ9HD89 108 aa14.02□□□□□ -0.17
SSSCA1-206ENST00000531405 COA4Q9NYJ1 87 aa14.02□□□□□ -0.17
SSSCA1-206ENST00000531405 PEF1Q9UBV8 284 aaKnown RBP14.02□□□□□ -0.17
SSSCA1-206ENST00000531405 AK6Q9Y3D8 172 aaKnown RBP14.02□□□□□ -0.17
SSSCA1-206ENST00000531405 ALMS1Q8TCU4 4167 aa14.01□□□□□ -0.17
SSSCA1-206ENST00000531405 TRDCB7Z8K6 153 aa14.01□□□□□ -0.17
SSSCA1-206ENST00000531405 PTGES3LE9PB15 166 aa14.01□□□□□ -0.17
SSSCA1-206ENST00000531405 SLC17A2O00624 439 aa14.01□□□□□ -0.17
SSSCA1-206ENST00000531405 CSN3P07498 182 aa14.01□□□□□ -0.17
SSSCA1-206ENST00000531405 DYRK1AQ13627 763 aa14.01□□□□□ -0.17
SSSCA1-206ENST00000531405 MOGAT2Q3SYC2 334 aa14.01□□□□□ -0.17
SSSCA1-206ENST00000531405 ZNF343Q6P1L6 599 aa14.01□□□□□ -0.17
SSSCA1-206ENST00000531405 BVESQ8NE79 360 aa14.01□□□□□ -0.17
SSSCA1-206ENST00000531405 C5orf30Q96GV9 206 aa14.01□□□□□ -0.17
SSSCA1-206ENST00000531405 TUBA4BQ9H853 241 aa14.01□□□□□ -0.17
SSSCA1-206ENST00000531405 SDHAF2Q9NX18 166 aa14.01□□□□□ -0.17
SSSCA1-206ENST00000531405 EBAG9O00559 213 aa14□□□□□ -0.17
SSSCA1-206ENST00000531405 BET1O15155 118 aa14□□□□□ -0.17
SSSCA1-206ENST00000531405 LGALS7P47929 136 aa14□□□□□ -0.17
SSSCA1-206ENST00000531405 PLA2G7Q13093 441 aa14□□□□□ -0.17
SSSCA1-206ENST00000531405 RAB11BQ15907 218 aa14□□□□□ -0.17
SSSCA1-206ENST00000531405 MRGPRG-AS1Q2M3A8 158 aa14□□□□□ -0.17
SSSCA1-206ENST00000531405 IGSF11Q5DX21 431 aa14□□□□□ -0.17
SSSCA1-206ENST00000531405 RNLSQ5VYX0 342 aa14□□□□□ -0.17
SSSCA1-206ENST00000531405 TMEM91Q6ZNR0 172 aa14□□□□□ -0.17
SSSCA1-206ENST00000531405 GTSCR1Q86UQ5 136 aa14□□□□□ -0.17
SSSCA1-206ENST00000531405 ZNF436-AS1Q8NC38 126 aaPredicted RBP14□□□□□ -0.17
SSSCA1-206ENST00000531405 SRRM4A7MD48 611 aaKnown RBP13.99□□□□□ -0.17
SSSCA1-206ENST00000531405 SHOXO15266 292 aa13.99□□□□□ -0.17
SSSCA1-206ENST00000531405 AADACP22760 399 aa13.99□□□□□ -0.17
SSSCA1-206ENST00000531405 RPS25P62851 125 aaKnown RBP13.99□□□□□ -0.17
SSSCA1-206ENST00000531405 RPEL1Q2QD12 228 aa13.99□□□□□ -0.17
SSSCA1-206ENST00000531405 OGFRL1Q5TC84 451 aaPredicted RBP13.99□□□□□ -0.17
SSSCA1-206ENST00000531405 LCN12Q6JVE5 192 aa13.99□□□□□ -0.17
SSSCA1-206ENST00000531405 UFD1Q92890 307 aa13.99□□□□□ -0.17
SSSCA1-206ENST00000531405 PHB2Q99623 299 aa13.99□□□□□ -0.17
SSSCA1-206ENST00000531405 FABP7O15540 132 aa13.98□□□□□ -0.17
SSSCA1-206ENST00000531405 BRI3O95415 125 aa13.98□□□□□ -0.17
SSSCA1-206ENST00000531405 IFNA6P05013 189 aa13.98□□□□□ -0.17
SSSCA1-206ENST00000531405 GSTT2P0CG29 244 aa13.98□□□□□ -0.17
SSSCA1-206ENST00000531405 GSTT2BP0CG30 244 aa13.98□□□□□ -0.17
SSSCA1-206ENST00000531405 Q8N402 240 aa13.98□□□□□ -0.17
SSSCA1-206ENST00000531405 OR4A4PQ8NGN8 299 aa13.98□□□□□ -0.17
SSSCA1-206ENST00000531405 MAFIPQ8WZ33 124 aa13.98□□□□□ -0.17
SSSCA1-206ENST00000531405 TMEM68Q96MH6 324 aa13.98□□□□□ -0.17
SSSCA1-206ENST00000531405 FAM110AQ9BQ89 295 aa13.98□□□□□ -0.17
SSSCA1-206ENST00000531405 PLEKHA3Q9HB20 300 aa13.98□□□□□ -0.17
SSSCA1-206ENST00000531405 MSGN1A6NI15 193 aa13.97□□□□□ -0.17
SSSCA1-206ENST00000531405 PRH1P02810 166 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms