RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 CHST6Q9GZX3 395 aa5.05□□□□□ -1.6
CSDE1-213ENST00000530784 GAL3ST2Q9H3Q3 398 aa5.05□□□□□ -1.6
CSDE1-213ENST00000530784 ADGRL4Q9HBW9 690 aa5.05□□□□□ -1.6
CSDE1-213ENST00000530784 CLN6Q9NWW5 311 aa5.05□□□□□ -1.6
CSDE1-213ENST00000530784 MTCH1Q9NZJ7 389 aa5.05□□□□□ -1.6
CSDE1-213ENST00000530784 IGKV1-27A0A075B6S5 117 aa5.04□□□□□ -1.6
CSDE1-213ENST00000530784 M0R129 80 aa5.04□□□□□ -1.6
CSDE1-213ENST00000530784 CYB5AP00167 134 aa5.04□□□□□ -1.6
CSDE1-213ENST00000530784 SERPINA3P01011 423 aa5.04□□□□□ -1.6
CSDE1-213ENST00000530784 CD24P25063 80 aa5.04□□□□□ -1.6
CSDE1-213ENST00000530784 FLOT2Q14254 428 aa5.04□□□□□ -1.6
CSDE1-213ENST00000530784 PTGES3Q15185 160 aaKnown RBP5.04□□□□□ -1.6
CSDE1-213ENST00000530784 UBE2V2Q15819 145 aa5.04□□□□□ -1.6
CSDE1-213ENST00000530784 ABCA11PQ4W5N1 156 aa5.04□□□□□ -1.6
CSDE1-213ENST00000530784 DEFB121Q5J5C9 76 aa5.04□□□□□ -1.6
CSDE1-213ENST00000530784 SPIN3Q5JUX0 258 aa5.04□□□□□ -1.6
CSDE1-213ENST00000530784 ZNF506Q5JVG8 444 aa5.04□□□□□ -1.6
CSDE1-213ENST00000530784 PRAMEF5Q5TYX0 476 aa5.04□□□□□ -1.6
CSDE1-213ENST00000530784 NXNL2Q5VZ03 156 aa5.04□□□□□ -1.6
CSDE1-213ENST00000530784 OR52W1Q6IF63 320 aa5.04□□□□□ -1.6
CSDE1-213ENST00000530784 Q6ZSR3 168 aa5.04□□□□□ -1.6
CSDE1-213ENST00000530784 KCTD9Q7L273 389 aa5.04□□□□□ -1.6
CSDE1-213ENST00000530784 SPATA24Q86W54 205 aa5.04□□□□□ -1.6
CSDE1-213ENST00000530784 GID4Q8IVV7 300 aa5.04□□□□□ -1.6
CSDE1-213ENST00000530784 ENTHD1Q8IYW4 607 aa5.04□□□□□ -1.6
CSDE1-213ENST00000530784 YIPF7Q8N8F6 280 aa5.04□□□□□ -1.6
CSDE1-213ENST00000530784 CCDC54Q8NEL0 328 aa5.04□□□□□ -1.6
CSDE1-213ENST00000530784 STMN2Q93045 179 aa5.04□□□□□ -1.6
CSDE1-213ENST00000530784 GPR61Q9BZJ8 451 aa5.04□□□□□ -1.6
CSDE1-213ENST00000530784 CLEC5AQ9NY25 188 aa5.04□□□□□ -1.6
CSDE1-213ENST00000530784 DPM3Q9P2X0 92 aa5.04□□□□□ -1.6
CSDE1-213ENST00000530784 GLS2Q9UI32 602 aa5.04□□□□□ -1.6
CSDE1-213ENST00000530784 MRM2Q9UI43 246 aaKnown RBP5.04□□□□□ -1.6
CSDE1-213ENST00000530784 SPATA2Q9UM82 520 aa5.04□□□□□ -1.6
CSDE1-213ENST00000530784 VSIG4Q9Y279 399 aa5.04□□□□□ -1.6
CSDE1-213ENST00000530784 TRGV10A0A0A0MS01 117 aa5.03□□□□□ -1.6
CSDE1-213ENST00000530784 TRBV2A0A0J9YWF9 115 aa5.03□□□□□ -1.6
CSDE1-213ENST00000530784 WI2-2373I1.2A0A1W2PRP0 233 aa5.03□□□□□ -1.6
CSDE1-213ENST00000530784 FUOMA2VDF0 154 aa5.03□□□□□ -1.6
CSDE1-213ENST00000530784 SRRM4A7MD48 611 aaKnown RBP5.03□□□□□ -1.6
CSDE1-213ENST00000530784 LEUTXA8MZ59 168 aa5.03□□□□□ -1.6
CSDE1-213ENST00000530784 H3BSH0 61 aa5.03□□□□□ -1.6
CSDE1-213ENST00000530784 M0QZK8 103 aa5.03□□□□□ -1.6
CSDE1-213ENST00000530784 SIRPB1O00241 398 aa5.03□□□□□ -1.6
CSDE1-213ENST00000530784 TOR1AO14656 332 aa5.03□□□□□ -1.6
CSDE1-213ENST00000530784 FKBP6O75344 327 aa5.03□□□□□ -1.6
CSDE1-213ENST00000530784 ENTPD6O75354 484 aa5.03□□□□□ -1.6
CSDE1-213ENST00000530784 MMP23AO75900 390 aa5.03□□□□□ -1.6
CSDE1-213ENST00000530784 OR2F2O95006 317 aa5.03□□□□□ -1.6
CSDE1-213ENST00000530784 FAM107AO95990 144 aa5.03□□□□□ -1.6
CSDE1-213ENST00000530784 UBCP0CG48 685 aaKnown RBP5.03□□□□□ -1.6
CSDE1-213ENST00000530784 PRKACAP17612 351 aa5.03□□□□□ -1.6
CSDE1-213ENST00000530784 CDK2P24941 298 aa5.03□□□□□ -1.6
CSDE1-213ENST00000530784 ERP29P30040 261 aaKnown RBP5.03□□□□□ -1.6
CSDE1-213ENST00000530784 CEACAM3P40198 252 aa5.03□□□□□ -1.6
CSDE1-213ENST00000530784 POU3F4P49335 361 aa5.03□□□□□ -1.6
CSDE1-213ENST00000530784 RBP2P50120 134 aa5.03□□□□□ -1.6
CSDE1-213ENST00000530784 ATP1B3P54709 279 aa5.03□□□□□ -1.6
CSDE1-213ENST00000530784 CDC42P60953 191 aa5.03□□□□□ -1.6
CSDE1-213ENST00000530784 RPS27AP62979 156 aaKnown RBP5.03□□□□□ -1.6
CSDE1-213ENST00000530784 BDH1Q02338 343 aa5.03□□□□□ -1.6
CSDE1-213ENST00000530784 MEF2DQ14814 521 aa5.03□□□□□ -1.6
CSDE1-213ENST00000530784 AADACL4Q5VUY2 407 aa5.03□□□□□ -1.6
CSDE1-213ENST00000530784 FAHD1Q6P587 224 aa5.03□□□□□ -1.6
CSDE1-213ENST00000530784 HEPN1Q6WQI6 88 aa5.03□□□□□ -1.6
CSDE1-213ENST00000530784 SSX6Q7RTT6 188 aa5.03□□□□□ -1.6
CSDE1-213ENST00000530784 FAM58AQ8N1B3 248 aa5.03□□□□□ -1.6
CSDE1-213ENST00000530784 OSR2Q8N2R0 312 aa5.03□□□□□ -1.6
CSDE1-213ENST00000530784 BEST4Q8NFU0 473 aa5.03□□□□□ -1.6
CSDE1-213ENST00000530784 OR51D1Q8NGF3 324 aa5.03□□□□□ -1.6
CSDE1-213ENST00000530784 PP6455Q8WZ26 134 aa5.03□□□□□ -1.6
CSDE1-213ENST00000530784 CREB3L1Q96BA8 519 aa5.03□□□□□ -1.6
CSDE1-213ENST00000530784 NRBF2Q96F24 287 aa5.03□□□□□ -1.6
CSDE1-213ENST00000530784 ZNF414Q96IQ9 312 aa5.03□□□□□ -1.6
CSDE1-213ENST00000530784 RBM14Q96PK6 669 aaKnown RBP5.03□□□□□ -1.6
CSDE1-213ENST00000530784 RCHY1Q96PM5 261 aa5.03□□□□□ -1.6
CSDE1-213ENST00000530784 TBX5Q99593 518 aa5.03□□□□□ -1.6
CSDE1-213ENST00000530784 ZNF649Q9BS31 505 aa5.03□□□□□ -1.6
CSDE1-213ENST00000530784 THTPAQ9BU02 230 aa5.03□□□□□ -1.6
CSDE1-213ENST00000530784 EXOSC4Q9NPD3 245 aaKnown RBP5.03□□□□□ -1.6
CSDE1-213ENST00000530784 INPP5EQ9NRR6 644 aa5.03□□□□□ -1.6
CSDE1-213ENST00000530784 RBFOX1Q9NWB1 397 aaKnown RBP5.03□□□□□ -1.6
CSDE1-213ENST00000530784 LOC107986453A0A1B0GWG9 222 aa5.02□□□□□ -1.61
CSDE1-213ENST00000530784 A0A1W2PQL4 384 aaPredicted RBP5.02□□□□□ -1.61
CSDE1-213ENST00000530784 PSMB11A5LHX3 300 aa5.02□□□□□ -1.61
CSDE1-213ENST00000530784 METTL15A6NJ78 407 aa5.02□□□□□ -1.61
CSDE1-213ENST00000530784 SH2D1BO14796 132 aa5.02□□□□□ -1.61
CSDE1-213ENST00000530784 SULT1C4O75897 302 aa5.02□□□□□ -1.61
CSDE1-213ENST00000530784 OR2H2O95918 312 aa5.02□□□□□ -1.61
CSDE1-213ENST00000530784 IGLV1-47P01700 117 aa5.02□□□□□ -1.61
CSDE1-213ENST00000530784 HCKP08631 526 aa5.02□□□□□ -1.61
CSDE1-213ENST00000530784 OCM2P0CE71 109 aa5.02□□□□□ -1.61
CSDE1-213ENST00000530784 OCMP0CE72 109 aaPredicted RBP5.02□□□□□ -1.61
CSDE1-213ENST00000530784 CALCBP10092 127 aa5.02□□□□□ -1.61
CSDE1-213ENST00000530784 PTGFRP43088 359 aa5.02□□□□□ -1.61
CSDE1-213ENST00000530784 NPBWR2P48146 333 aa5.02□□□□□ -1.61
CSDE1-213ENST00000530784 DAPP51397 102 aa5.02□□□□□ -1.61
CSDE1-213ENST00000530784 EGFEM1PQ0D2K5 195 aa5.02□□□□□ -1.61
CSDE1-213ENST00000530784 HLA-DRB5Q30154 266 aa5.02□□□□□ -1.61
CSDE1-213ENST00000530784 DNAL1Q4LDG9 190 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms