RNA–Protein interactions for RNA: ENST00000527464.5

NR1H3-229, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best)

Gene NR1H3, Length 1,183 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-229ENST00000527464 HOGA1Q86XE5 327 aa13.25□□□□□ -0.29
NR1H3-229ENST00000527464 ANKRD13BQ86YJ7 626 aa13.25□□□□□ -0.29
NR1H3-229ENST00000527464 BEST4Q8NFU0 473 aa13.25□□□□□ -0.29
NR1H3-229ENST00000527464 CMTM3Q96MX0 182 aa13.25□□□□□ -0.29
NR1H3-229ENST00000527464 MRPS26Q9BYN8 205 aaKnown RBP13.25□□□□□ -0.29
NR1H3-229ENST00000527464 FBXL15Q9H469 300 aa13.25□□□□□ -0.29
NR1H3-229ENST00000527464 HLA-DQB1P01920 261 aa13.24□□□□□ -0.29
NR1H3-229ENST00000527464 IGKV1-16P04430 117 aa13.24□□□□□ -0.29
NR1H3-229ENST00000527464 CRIP2P52943 208 aaPredicted RBP13.24□□□□□ -0.29
NR1H3-229ENST00000527464 VBP1P61758 197 aa13.24□□□□□ -0.29
NR1H3-229ENST00000527464 PLGLAQ15195 96 aa13.24□□□□□ -0.29
NR1H3-229ENST00000527464 PSG5Q15238 335 aa13.24□□□□□ -0.29
NR1H3-229ENST00000527464 RTL8BQ17RB0 113 aa13.24□□□□□ -0.29
NR1H3-229ENST00000527464 SAMD5Q5TGI4 173 aa13.24□□□□□ -0.29
NR1H3-229ENST00000527464 SAMD12Q8N8I0 201 aa13.24□□□□□ -0.29
NR1H3-229ENST00000527464 ACOT12Q8WYK0 555 aa13.24□□□□□ -0.29
NR1H3-229ENST00000527464 ATP6V0E1O15342 81 aa13.23□□□□□ -0.29
NR1H3-229ENST00000527464 TUSC2O75896 110 aa13.23□□□□□ -0.29
NR1H3-229ENST00000527464 GABARAPO95166 117 aa13.23□□□□□ -0.29
NR1H3-229ENST00000527464 PPIFP30405 207 aaKnown RBP13.23□□□□□ -0.29
NR1H3-229ENST00000527464 CDX1P47902 265 aaPredicted RBP13.23□□□□□ -0.29
NR1H3-229ENST00000527464 LINC00205P59089 165 aa13.23□□□□□ -0.29
NR1H3-229ENST00000527464 ARPC4P59998 168 aa13.23□□□□□ -0.29
NR1H3-229ENST00000527464 CX3CL1P78423 397 aa13.23□□□□□ -0.29
NR1H3-229ENST00000527464 ZNF695Q8IW36 515 aa13.23□□□□□ -0.29
NR1H3-229ENST00000527464 ZNF645Q8N7E2 425 aa13.23□□□□□ -0.29
NR1H3-229ENST00000527464 C5orf30Q96GV9 206 aa13.23□□□□□ -0.29
NR1H3-229ENST00000527464 PARP11Q9NR21 331 aa13.23□□□□□ -0.29
NR1H3-229ENST00000527464 METTL1Q9UBP6 276 aaKnown RBP13.23□□□□□ -0.29
NR1H3-229ENST00000527464 TNCP24821 2201 aa13.23□□□□□ -0.29
NR1H3-229ENST00000527464 TRAV41A0A0B4J266 112 aa13.22□□□□□ -0.29
NR1H3-229ENST00000527464 NUDT19A8MXV4 375 aa13.22□□□□□ -0.29
NR1H3-229ENST00000527464 CD33P20138 364 aa13.22□□□□□ -0.29
NR1H3-229ENST00000527464 NFYAP23511 347 aaPredicted RBP13.22□□□□□ -0.29
NR1H3-229ENST00000527464 PSMB8P28062 276 aa13.22□□□□□ -0.29
NR1H3-229ENST00000527464 DUTP33316 252 aaKnown RBP13.22□□□□□ -0.29
NR1H3-229ENST00000527464 RORCP51449 518 aa13.22□□□□□ -0.29
NR1H3-229ENST00000527464 TMEM267Q0VDI3 215 aaPredicted RBP13.22□□□□□ -0.29
NR1H3-229ENST00000527464 TMEM177Q53S58 311 aa13.22□□□□□ -0.29
NR1H3-229ENST00000527464 TMEM69Q5SWH9 247 aa13.22□□□□□ -0.29
NR1H3-229ENST00000527464 KPRPQ5T749 579 aaPredicted RBP13.22□□□□□ -0.29
NR1H3-229ENST00000527464 ZNF562Q6V9R5 426 aa13.22□□□□□ -0.29
NR1H3-229ENST00000527464 TCTEX1D1Q8N7M0 179 aa13.22□□□□□ -0.29
NR1H3-229ENST00000527464 NECAP2Q9NVZ3 263 aa13.22□□□□□ -0.29
NR1H3-229ENST00000527464 G3V4G9 280 aa13.21□□□□□ -0.29
NR1H3-229ENST00000527464 APOA1P02647 267 aa13.21□□□□□ -0.29
NR1H3-229ENST00000527464 RPLP1P05386 114 aaKnown RBP13.21□□□□□ -0.29
NR1H3-229ENST00000527464 MYCNOSP40205 109 aa13.21□□□□□ -0.29
NR1H3-229ENST00000527464 ALDH3B2P48448 385 aa13.21□□□□□ -0.29
NR1H3-229ENST00000527464 MSMO1Q15800 293 aa13.21□□□□□ -0.29
NR1H3-229ENST00000527464 CTF1Q16619 201 aa13.21□□□□□ -0.29
NR1H3-229ENST00000527464 GVQW1Q8N7I0 195 aa13.21□□□□□ -0.29
NR1H3-229ENST00000527464 MINDY2Q8NBR6 621 aa13.21□□□□□ -0.29
NR1H3-229ENST00000527464 KLHL30-AS1Q8NEE0 82 aa13.21□□□□□ -0.29
NR1H3-229ENST00000527464 DDB2Q92466 427 aa13.21□□□□□ -0.29
NR1H3-229ENST00000527464 RBMX2Q9Y388 322 aaKnown RBP13.21□□□□□ -0.29
NR1H3-229ENST00000527464 WSB1Q9Y6I7 421 aa13.21□□□□□ -0.29
NR1H3-229ENST00000527464 SMIM31A0A1B0GVY4 71 aa13.2□□□□□ -0.3
NR1H3-229ENST00000527464 G3V318 75 aa13.2□□□□□ -0.3
NR1H3-229ENST00000527464 FCN1O00602 326 aa13.2□□□□□ -0.3
NR1H3-229ENST00000527464 SLC25A17O43808 307 aa13.2□□□□□ -0.3
NR1H3-229ENST00000527464 DUS4LO95620 317 aaKnown RBP13.2□□□□□ -0.3
NR1H3-229ENST00000527464 IGLV1-40P01703 118 aa13.2□□□□□ -0.3
NR1H3-229ENST00000527464 TAS2R20P59543 309 aa13.2□□□□□ -0.3
NR1H3-229ENST00000527464 NDPQ00604 133 aa13.2□□□□□ -0.3
NR1H3-229ENST00000527464 BEAN1Q3B7T3 259 aa13.2□□□□□ -0.3
NR1H3-229ENST00000527464 C19orf54Q5BKX5 351 aa13.2□□□□□ -0.3
NR1H3-229ENST00000527464 TMEM65Q6PI78 240 aa13.2□□□□□ -0.3
NR1H3-229ENST00000527464 GPR141Q7Z602 305 aa13.2□□□□□ -0.3
NR1H3-229ENST00000527464 PPP1R27Q86WC6 154 aa13.2□□□□□ -0.3
NR1H3-229ENST00000527464 C1QL4Q86Z23 238 aa13.2□□□□□ -0.3
NR1H3-229ENST00000527464 BVESQ8NE79 360 aa13.2□□□□□ -0.3
NR1H3-229ENST00000527464 OR5AP2Q8NGF4 316 aa13.2□□□□□ -0.3
NR1H3-229ENST00000527464 MYOZ3Q8TDC0 251 aa13.2□□□□□ -0.3
NR1H3-229ENST00000527464 AP3S1Q92572 193 aa13.2□□□□□ -0.3
NR1H3-229ENST00000527464 RCC1LQ96I51 464 aaKnown RBP13.2□□□□□ -0.3
NR1H3-229ENST00000527464 HARBI1Q96MB7 349 aa13.2□□□□□ -0.3
NR1H3-229ENST00000527464 HSD17B10Q99714 261 aaKnown RBP13.2□□□□□ -0.3
NR1H3-229ENST00000527464 IFT46Q9NQC8 304 aa13.2□□□□□ -0.3
NR1H3-229ENST00000527464 COMMD3Q9UBI1 195 aa13.2□□□□□ -0.3
NR1H3-229ENST00000527464 PRELID3BQ9Y3B1 194 aa13.2□□□□□ -0.3
NR1H3-229ENST00000527464 NUBP2Q9Y5Y2 271 aa13.2□□□□□ -0.3
NR1H3-229ENST00000527464 IGKV1D-13A0A0B4J2D9 117 aa13.19□□□□□ -0.3
NR1H3-229ENST00000527464 LINC00473A8K010 186 aa13.19□□□□□ -0.3
NR1H3-229ENST00000527464 SHOXO15266 292 aa13.19□□□□□ -0.3
NR1H3-229ENST00000527464 IGLV2-23P01705 113 aa13.19□□□□□ -0.3
NR1H3-229ENST00000527464 IGKV1-13P0DP09 117 aa13.19□□□□□ -0.3
NR1H3-229ENST00000527464 AKIRIN2Q53H80 203 aa13.19□□□□□ -0.3
NR1H3-229ENST00000527464 GPR107Q5VW38 600 aa13.19□□□□□ -0.3
NR1H3-229ENST00000527464 MZT2AQ6P582 158 aa13.19□□□□□ -0.3
NR1H3-229ENST00000527464 ETV3LQ6ZN32 361 aa13.19□□□□□ -0.3
NR1H3-229ENST00000527464 C8orf86Q6ZUL3 223 aa13.19□□□□□ -0.3
NR1H3-229ENST00000527464 LINC00482Q8N8I6 264 aa13.19□□□□□ -0.3
NR1H3-229ENST00000527464 OSR1Q8TAX0 266 aaPredicted RBP13.19□□□□□ -0.3
NR1H3-229ENST00000527464 NAA50Q9GZZ1 169 aaKnown RBP13.19□□□□□ -0.3
NR1H3-229ENST00000527464 ANAPC10Q9UM13 185 aa13.19□□□□□ -0.3
NR1H3-229ENST00000527464 FOXA2Q9Y261 457 aaPredicted RBP13.19□□□□□ -0.3
NR1H3-229ENST00000527464 J3QRK9 145 aa13.18□□□□□ -0.3
NR1H3-229ENST00000527464 WIPF1O43516 503 aa13.18□□□□□ -0.3
NR1H3-229ENST00000527464 CA2P00918 260 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms