RNA–Protein interactions for RNA: ENST00000524213.5

CSGALNACT1-216, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-216ENST00000524213 ACTBL2Q562R1 376 aa13.17□□□□□ -0.3
CSGALNACT1-216ENST00000524213 PYHIN1Q6K0P9 492 aa13.17□□□□□ -0.3
CSGALNACT1-216ENST00000524213 Q6ZS46 218 aa13.17□□□□□ -0.3
CSGALNACT1-216ENST00000524213 SLC35E3Q7Z769 313 aa13.17□□□□□ -0.3
CSGALNACT1-216ENST00000524213 DRAXINQ8NBI3 349 aaPredicted RBP13.17□□□□□ -0.3
CSGALNACT1-216ENST00000524213 ZBTB34Q8NCN2 500 aa13.17□□□□□ -0.3
CSGALNACT1-216ENST00000524213 NPBQ8NG41 125 aa13.17□□□□□ -0.3
CSGALNACT1-216ENST00000524213 FCAMRQ8WWV6 532 aa13.17□□□□□ -0.3
CSGALNACT1-216ENST00000524213 BORCS5Q969J3 196 aa13.17□□□□□ -0.3
CSGALNACT1-216ENST00000524213 WNT10AQ9GZT5 417 aa13.17□□□□□ -0.3
CSGALNACT1-216ENST00000524213 MMP27Q9H306 513 aa13.17□□□□□ -0.3
CSGALNACT1-216ENST00000524213 RBMX2Q9Y388 322 aaKnown RBP13.17□□□□□ -0.3
CSGALNACT1-216ENST00000524213 A3GALT2U3KPV4 340 aa13.17□□□□□ -0.3
CSGALNACT1-216ENST00000524213 SH2D7A6NKC9 451 aaPredicted RBP13.16□□□□□ -0.3
CSGALNACT1-216ENST00000524213 KCNAB3O43448 404 aa13.16□□□□□ -0.3
CSGALNACT1-216ENST00000524213 NDUFA3O95167 84 aa13.16□□□□□ -0.3
CSGALNACT1-216ENST00000524213 PMP2P02689 132 aa13.16□□□□□ -0.3
CSGALNACT1-216ENST00000524213 AADACP22760 399 aa13.16□□□□□ -0.3
CSGALNACT1-216ENST00000524213 DUTP33316 252 aaKnown RBP13.16□□□□□ -0.3
CSGALNACT1-216ENST00000524213 F2RL1P55085 397 aa13.16□□□□□ -0.3
CSGALNACT1-216ENST00000524213 HERV-K104P61576 105 aa13.16□□□□□ -0.3
CSGALNACT1-216ENST00000524213 RPS16P62249 146 aaKnown RBP13.16□□□□□ -0.3
CSGALNACT1-216ENST00000524213 DYRK1AQ13627 763 aa13.16□□□□□ -0.3
CSGALNACT1-216ENST00000524213 RTL8BQ17RB0 113 aa13.16□□□□□ -0.3
CSGALNACT1-216ENST00000524213 DHRS11Q6UWP2 260 aa13.16□□□□□ -0.3
CSGALNACT1-216ENST00000524213 FOXRED2Q8IWF2 684 aa13.16□□□□□ -0.3
CSGALNACT1-216ENST00000524213 FAM71E2Q8N5Q1 922 aa13.16□□□□□ -0.3
CSGALNACT1-216ENST00000524213 FLYWCH2Q96CP2 140 aaKnown RBP13.16□□□□□ -0.3
CSGALNACT1-216ENST00000524213 DGCR14Q96DF8 476 aaKnown RBP13.16□□□□□ -0.3
CSGALNACT1-216ENST00000524213 ABHD1Q96SE0 405 aa13.16□□□□□ -0.3
CSGALNACT1-216ENST00000524213 TSNAXQ99598 290 aaKnown RBP13.16□□□□□ -0.3
CSGALNACT1-216ENST00000524213 DCUN1D5Q9BTE7 237 aa13.16□□□□□ -0.3
CSGALNACT1-216ENST00000524213 IGKV1D-13A0A0B4J2D9 117 aa13.15□□□□□ -0.3
CSGALNACT1-216ENST00000524213 GABARAPH6UMI1 98 aa13.15□□□□□ -0.3
CSGALNACT1-216ENST00000524213 CTDSPLO15194 276 aa13.15□□□□□ -0.3
CSGALNACT1-216ENST00000524213 SPDEFO95238 335 aa13.15□□□□□ -0.3
CSGALNACT1-216ENST00000524213 IGKV1-13P0DP09 117 aa13.15□□□□□ -0.3
CSGALNACT1-216ENST00000524213 HLA-DMAP28067 261 aa13.15□□□□□ -0.3
CSGALNACT1-216ENST00000524213 S100A5P33763 92 aa13.15□□□□□ -0.3
CSGALNACT1-216ENST00000524213 SSBP1Q04837 148 aaKnown RBP13.15□□□□□ -0.3
CSGALNACT1-216ENST00000524213 IL18Q14116 193 aa13.15□□□□□ -0.3
CSGALNACT1-216ENST00000524213 ZNF66Q6ZN08 573 aa13.15□□□□□ -0.3
CSGALNACT1-216ENST00000524213 CENPVQ7Z7K6 275 aaPredicted RBP13.15□□□□□ -0.3
CSGALNACT1-216ENST00000524213 LYSMD2Q8IV50 215 aa13.15□□□□□ -0.3
CSGALNACT1-216ENST00000524213 OR6F1Q8NGZ6 308 aa13.15□□□□□ -0.3
CSGALNACT1-216ENST00000524213 SECTM1Q8WVN6 248 aa13.15□□□□□ -0.3
CSGALNACT1-216ENST00000524213 C5orf30Q96GV9 206 aa13.15□□□□□ -0.3
CSGALNACT1-216ENST00000524213 HSD17B10Q99714 261 aaKnown RBP13.15□□□□□ -0.3
CSGALNACT1-216ENST00000524213 MTFP1Q9UDX5 166 aa13.15□□□□□ -0.3
CSGALNACT1-216ENST00000524213 PRELID3BQ9Y3B1 194 aa13.15□□□□□ -0.3
CSGALNACT1-216ENST00000524213 RRHO14718 337 aa13.14□□□□□ -0.31
CSGALNACT1-216ENST00000524213 HRH1P35367 487 aa13.14□□□□□ -0.31
CSGALNACT1-216ENST00000524213 LGALS7P47929 136 aa13.14□□□□□ -0.31
CSGALNACT1-216ENST00000524213 RFX2P48378 723 aa13.14□□□□□ -0.31
CSGALNACT1-216ENST00000524213 FXYD4P59646 89 aa13.14□□□□□ -0.31
CSGALNACT1-216ENST00000524213 TSPAN5P62079 268 aa13.14□□□□□ -0.31
CSGALNACT1-216ENST00000524213 C5orf64Q2M2E5 130 aa13.14□□□□□ -0.31
CSGALNACT1-216ENST00000524213 TMEM95Q3KNT9 176 aa13.14□□□□□ -0.31
CSGALNACT1-216ENST00000524213 HIST2H2BDQ6DRA6 164 aa13.14□□□□□ -0.31
CSGALNACT1-216ENST00000524213 LIN54Q6MZP7 749 aa13.14□□□□□ -0.31
CSGALNACT1-216ENST00000524213 TREML4Q6UXN2 200 aa13.14□□□□□ -0.31
CSGALNACT1-216ENST00000524213 BVESQ8NE79 360 aa13.14□□□□□ -0.31
CSGALNACT1-216ENST00000524213 OR52I2Q8NH67 350 aa13.14□□□□□ -0.31
CSGALNACT1-216ENST00000524213 CHPT1Q8WUD6 406 aa13.14□□□□□ -0.31
CSGALNACT1-216ENST00000524213 ZNF2Q9BSG1 426 aaPredicted RBP13.14□□□□□ -0.31
CSGALNACT1-216ENST00000524213 GON7Q9BXV9 100 aa13.14□□□□□ -0.31
CSGALNACT1-216ENST00000524213 SLC5A7Q9GZV3 580 aa13.14□□□□□ -0.31
CSGALNACT1-216ENST00000524213 ZNF107Q9UII5 783 aaPredicted RBP13.14□□□□□ -0.31
CSGALNACT1-216ENST00000524213 WNK1Q9H4A3 2382 aa13.13□□□□□ -0.31
CSGALNACT1-216ENST00000524213 AP4M1O00189 453 aa13.13□□□□□ -0.31
CSGALNACT1-216ENST00000524213 HLA-DRB1P01911 266 aa13.13□□□□□ -0.31
CSGALNACT1-216ENST00000524213 TBPP20226 339 aa13.13□□□□□ -0.31
CSGALNACT1-216ENST00000524213 CNTFRP26992 372 aa13.13□□□□□ -0.31
CSGALNACT1-216ENST00000524213 TNFSF8P32971 234 aa13.13□□□□□ -0.31
CSGALNACT1-216ENST00000524213 LINC00205P59089 165 aa13.13□□□□□ -0.31
CSGALNACT1-216ENST00000524213 PLGLAQ15195 96 aa13.13□□□□□ -0.31
CSGALNACT1-216ENST00000524213 TMEM177Q53S58 311 aa13.13□□□□□ -0.31
CSGALNACT1-216ENST00000524213 RNASE12Q5GAN4 147 aaKnown RBP13.13□□□□□ -0.31
CSGALNACT1-216ENST00000524213 VAX1Q5SQQ9 334 aa13.13□□□□□ -0.31
CSGALNACT1-216ENST00000524213 KCTD9Q7L273 389 aa13.13□□□□□ -0.31
CSGALNACT1-216ENST00000524213 TMEM17Q86X19 198 aa13.13□□□□□ -0.31
CSGALNACT1-216ENST00000524213 C11orf44Q8N8P7 122 aa13.13□□□□□ -0.31
CSGALNACT1-216ENST00000524213 DDB2Q92466 427 aa13.13□□□□□ -0.31
CSGALNACT1-216ENST00000524213 MOB3AQ96BX8 217 aa13.13□□□□□ -0.31
CSGALNACT1-216ENST00000524213 RITA1Q96K30 269 aa13.13□□□□□ -0.31
CSGALNACT1-216ENST00000524213 CCL28Q9NRJ3 127 aa13.13□□□□□ -0.31
CSGALNACT1-216ENST00000524213 KLK11Q9UBX7 282 aa13.13□□□□□ -0.31
CSGALNACT1-216ENST00000524213 FABP12A6NFH5 140 aa13.12□□□□□ -0.31
CSGALNACT1-216ENST00000524213 M0QZ24 198 aa13.12□□□□□ -0.31
CSGALNACT1-216ENST00000524213 FBXO24O75426 580 aa13.12□□□□□ -0.31
CSGALNACT1-216ENST00000524213 IGLV2-14P01704 120 aa13.12□□□□□ -0.31
CSGALNACT1-216ENST00000524213 IGKV1-16P04430 117 aa13.12□□□□□ -0.31
CSGALNACT1-216ENST00000524213 IFNA6P05013 189 aa13.12□□□□□ -0.31
CSGALNACT1-216ENST00000524213 KIR2DS2P43631 304 aa13.12□□□□□ -0.31
CSGALNACT1-216ENST00000524213 TAS2R19P59542 299 aa13.12□□□□□ -0.31
CSGALNACT1-216ENST00000524213 SLC35B1P78383 322 aa13.12□□□□□ -0.31
CSGALNACT1-216ENST00000524213 CATR1Q13166 79 aa13.12□□□□□ -0.31
CSGALNACT1-216ENST00000524213 RNASE10Q5GAN6 216 aaKnown RBP13.12□□□□□ -0.31
CSGALNACT1-216ENST00000524213 ZNF660Q6AZW8 331 aaPredicted RBP13.12□□□□□ -0.31
CSGALNACT1-216ENST00000524213 LPCAT3Q6P1A2 487 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms