RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 DRAXINQ8NBI3 349 aaPredicted RBP16.4■□□□□ 0.22
TRAPPC9-215ENST00000524162 BEST4Q8NFU0 473 aa16.4■□□□□ 0.22
TRAPPC9-215ENST00000524162 FLYWCH2Q96CP2 140 aaKnown RBP16.4■□□□□ 0.22
TRAPPC9-215ENST00000524162 LINC00527Q9UJ94 153 aa16.4■□□□□ 0.22
TRAPPC9-215ENST00000524162 RBM7Q9Y580 266 aaKnown RBP16.4■□□□□ 0.22
TRAPPC9-215ENST00000524162 APOA1P02647 267 aa16.39■□□□□ 0.21
TRAPPC9-215ENST00000524162 PSMB8P28062 276 aa16.39■□□□□ 0.21
TRAPPC9-215ENST00000524162 PPIFP30405 207 aaKnown RBP16.39■□□□□ 0.21
TRAPPC9-215ENST00000524162 CDX1P47902 265 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC9-215ENST00000524162 ALDH3B2P48448 385 aa16.39■□□□□ 0.21
TRAPPC9-215ENST00000524162 LUMP51884 338 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC9-215ENST00000524162 CTF1Q16619 201 aa16.39■□□□□ 0.21
TRAPPC9-215ENST00000524162 CXorf66Q5JRM2 361 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC9-215ENST00000524162 SAMD5Q5TGI4 173 aa16.39■□□□□ 0.21
TRAPPC9-215ENST00000524162 ZNF562Q6V9R5 426 aa16.39■□□□□ 0.21
TRAPPC9-215ENST00000524162 ZNF645Q8N7E2 425 aa16.39■□□□□ 0.21
TRAPPC9-215ENST00000524162 SAMD12Q8N8I0 201 aa16.39■□□□□ 0.21
TRAPPC9-215ENST00000524162 DDB2Q92466 427 aa16.39■□□□□ 0.21
TRAPPC9-215ENST00000524162 SLC35D1Q9NTN3 355 aa16.39■□□□□ 0.21
TRAPPC9-215ENST00000524162 DUTP33316 252 aaKnown RBP16.38■□□□□ 0.21
TRAPPC9-215ENST00000524162 RORCP51449 518 aa16.38■□□□□ 0.21
TRAPPC9-215ENST00000524162 VBP1P61758 197 aa16.38■□□□□ 0.21
TRAPPC9-215ENST00000524162 CBX3Q13185 183 aa16.38■□□□□ 0.21
TRAPPC9-215ENST00000524162 PSG5Q15238 335 aa16.38■□□□□ 0.21
TRAPPC9-215ENST00000524162 RTL8BQ17RB0 113 aa16.38■□□□□ 0.21
TRAPPC9-215ENST00000524162 TMEM177Q53S58 311 aa16.38■□□□□ 0.21
TRAPPC9-215ENST00000524162 MINDY2Q8NBR6 621 aa16.38■□□□□ 0.21
TRAPPC9-215ENST00000524162 MYOZ3Q8TDC0 251 aa16.38■□□□□ 0.21
TRAPPC9-215ENST00000524162 IGLV1-40P01703 118 aa16.37■□□□□ 0.21
TRAPPC9-215ENST00000524162 RPS16P62249 146 aaKnown RBP16.37■□□□□ 0.21
TRAPPC9-215ENST00000524162 CX3CL1P78423 397 aa16.37■□□□□ 0.21
TRAPPC9-215ENST00000524162 C19orf54Q5BKX5 351 aa16.37■□□□□ 0.21
TRAPPC9-215ENST00000524162 TMEM69Q5SWH9 247 aa16.37■□□□□ 0.21
TRAPPC9-215ENST00000524162 ZNF695Q8IW36 515 aa16.37■□□□□ 0.21
TRAPPC9-215ENST00000524162 RBMXL1Q96E39 390 aaKnown RBP16.37■□□□□ 0.21
TRAPPC9-215ENST00000524162 C5orf30Q96GV9 206 aa16.37■□□□□ 0.21
TRAPPC9-215ENST00000524162 FBXL15Q9H469 300 aa16.37■□□□□ 0.21
TRAPPC9-215ENST00000524162 ANAPC10Q9UM13 185 aa16.37■□□□□ 0.21
TRAPPC9-215ENST00000524162 A0A1W2PRX2 142 aa16.36■□□□□ 0.21
TRAPPC9-215ENST00000524162 ATP6V0E1O15342 81 aa16.36■□□□□ 0.21
TRAPPC9-215ENST00000524162 DUS4LO95620 317 aaKnown RBP16.36■□□□□ 0.21
TRAPPC9-215ENST00000524162 ARPC4P59998 168 aa16.36■□□□□ 0.21
TRAPPC9-215ENST00000524162 TMEM267Q0VDI3 215 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC9-215ENST00000524162 KHDC1LQ5JSQ8 128 aa16.36■□□□□ 0.21
TRAPPC9-215ENST00000524162 OVCH2Q7RTZ1 564 aa16.36■□□□□ 0.21
TRAPPC9-215ENST00000524162 AP3S1Q92572 193 aa16.36■□□□□ 0.21
TRAPPC9-215ENST00000524162 NECAP2Q9NVZ3 263 aa16.36■□□□□ 0.21
TRAPPC9-215ENST00000524162 METTL1Q9UBP6 276 aaKnown RBP16.36■□□□□ 0.21
TRAPPC9-215ENST00000524162 NUBP2Q9Y5Y2 271 aa16.36■□□□□ 0.21
TRAPPC9-215ENST00000524162 TRAV41A0A0B4J266 112 aa16.35■□□□□ 0.21
TRAPPC9-215ENST00000524162 TPPPO94811 219 aa16.35■□□□□ 0.21
TRAPPC9-215ENST00000524162 PF4P02776 101 aa16.35■□□□□ 0.21
TRAPPC9-215ENST00000524162 NAT1P18440 290 aa16.35■□□□□ 0.21
TRAPPC9-215ENST00000524162 NFYAP23511 347 aaPredicted RBP16.35■□□□□ 0.21
TRAPPC9-215ENST00000524162 MYCNOSP40205 109 aa16.35■□□□□ 0.21
TRAPPC9-215ENST00000524162 LINC00205P59089 165 aa16.35■□□□□ 0.21
TRAPPC9-215ENST00000524162 DEFA6Q01524 100 aa16.35■□□□□ 0.21
TRAPPC9-215ENST00000524162 PLGLAQ15195 96 aa16.35■□□□□ 0.21
TRAPPC9-215ENST00000524162 AKIRIN2Q53H80 203 aa16.35■□□□□ 0.21
TRAPPC9-215ENST00000524162 PPP1R27Q86WC6 154 aa16.35■□□□□ 0.21
TRAPPC9-215ENST00000524162 GVQW1Q8N7I0 195 aa16.35■□□□□ 0.21
TRAPPC9-215ENST00000524162 OR5AP2Q8NGF4 316 aa16.35■□□□□ 0.21
TRAPPC9-215ENST00000524162 OSR1Q8TAX0 266 aaPredicted RBP16.35■□□□□ 0.21
TRAPPC9-215ENST00000524162 BCL7BQ9BQE9 202 aa16.35■□□□□ 0.21
TRAPPC9-215ENST00000524162 RBMX2Q9Y388 322 aaKnown RBP16.35■□□□□ 0.21
TRAPPC9-215ENST00000524162 PRKDCP78527 4128 aaKnown RBP16.34■□□□□ 0.21
TRAPPC9-215ENST00000524162 IGLV2-14P01704 120 aa16.34■□□□□ 0.21
TRAPPC9-215ENST00000524162 IGLV2-23P01705 113 aa16.34■□□□□ 0.21
TRAPPC9-215ENST00000524162 CRYGBP07316 175 aa16.34■□□□□ 0.21
TRAPPC9-215ENST00000524162 TAS2R20P59543 309 aa16.34■□□□□ 0.21
TRAPPC9-215ENST00000524162 BEAN1Q3B7T3 259 aa16.34■□□□□ 0.21
TRAPPC9-215ENST00000524162 PYHIN1Q6K0P9 492 aa16.34■□□□□ 0.21
TRAPPC9-215ENST00000524162 GPR141Q7Z602 305 aa16.34■□□□□ 0.21
TRAPPC9-215ENST00000524162 ZBTB34Q8NCN2 500 aa16.34■□□□□ 0.21
TRAPPC9-215ENST00000524162 GIMAP1Q8WWP7 306 aa16.34■□□□□ 0.21
TRAPPC9-215ENST00000524162 SNAPC3Q92966 411 aa16.34■□□□□ 0.21
TRAPPC9-215ENST00000524162 RCC1LQ96I51 464 aaKnown RBP16.34■□□□□ 0.21
TRAPPC9-215ENST00000524162 UBE2E2Q96LR5 201 aa16.34■□□□□ 0.21
TRAPPC9-215ENST00000524162 HSD17B10Q99714 261 aaKnown RBP16.34■□□□□ 0.21
TRAPPC9-215ENST00000524162 SCPEP1Q9HB40 452 aa16.34■□□□□ 0.21
TRAPPC9-215ENST00000524162 PARP11Q9NR21 331 aa16.34■□□□□ 0.21
TRAPPC9-215ENST00000524162 PRELID3BQ9Y3B1 194 aa16.34■□□□□ 0.21
TRAPPC9-215ENST00000524162 SMIM31A0A1B0GVY4 71 aa16.33■□□□□ 0.2
TRAPPC9-215ENST00000524162 LINC00473A8K010 186 aa16.33■□□□□ 0.2
TRAPPC9-215ENST00000524162 FCN1O00602 326 aa16.33■□□□□ 0.2
TRAPPC9-215ENST00000524162 RPLP1P05386 114 aaKnown RBP16.33■□□□□ 0.2
TRAPPC9-215ENST00000524162 ZNF182P17025 639 aaPredicted RBP16.33■□□□□ 0.2
TRAPPC9-215ENST00000524162 CD33P20138 364 aa16.33■□□□□ 0.2
TRAPPC9-215ENST00000524162 NDPQ00604 133 aa16.33■□□□□ 0.2
TRAPPC9-215ENST00000524162 EIF4EBP1Q13541 118 aaPredicted RBP16.33■□□□□ 0.2
TRAPPC9-215ENST00000524162 GPR107Q5VW38 600 aa16.33■□□□□ 0.2
TRAPPC9-215ENST00000524162 MZT2AQ6P582 158 aa16.33■□□□□ 0.2
TRAPPC9-215ENST00000524162 ETV3LQ6ZN32 361 aa16.33■□□□□ 0.2
TRAPPC9-215ENST00000524162 LINC00482Q8N8I6 264 aa16.33■□□□□ 0.2
TRAPPC9-215ENST00000524162 TEX45Q8NA69 505 aa16.33■□□□□ 0.2
TRAPPC9-215ENST00000524162 HARBI1Q96MB7 349 aa16.33■□□□□ 0.2
TRAPPC9-215ENST00000524162 P2RX4Q99571 388 aa16.33■□□□□ 0.2
TRAPPC9-215ENST00000524162 ADAM30Q9UKF2 790 aa16.33■□□□□ 0.2
TRAPPC9-215ENST00000524162 DNAH3Q8TD57 4116 aa16.33■□□□□ 0.2
TRAPPC9-215ENST00000524162 IGKV1D-13A0A0B4J2D9 117 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms