RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 COCHO43405 550 aa2.26□□□□□ -2.05
HMGB1P1-201ENST00000522557 HIST1H1CP16403 213 aaKnown RBP2.26□□□□□ -2.05
HMGB1P1-201ENST00000522557 ATF1P18846 271 aa2.26□□□□□ -2.05
HMGB1P1-201ENST00000522557 CLDN12P56749 244 aa2.26□□□□□ -2.05
HMGB1P1-201ENST00000522557 KLF3P57682 345 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P1-201ENST00000522557 DYNLL1P63167 89 aaKnown RBP2.26□□□□□ -2.05
HMGB1P1-201ENST00000522557 KRTAP5-7Q6L8G8 165 aa2.26□□□□□ -2.05
HMGB1P1-201ENST00000522557 Q6ZRU5 148 aa2.26□□□□□ -2.05
HMGB1P1-201ENST00000522557 NIT1Q86X76 327 aa2.26□□□□□ -2.05
HMGB1P1-201ENST00000522557 ZNF664Q8N3J9 261 aa2.26□□□□□ -2.05
HMGB1P1-201ENST00000522557 SUN5Q8TC36 379 aa2.26□□□□□ -2.05
HMGB1P1-201ENST00000522557 GABARAPL1Q9H0R8 117 aa2.26□□□□□ -2.05
HMGB1P1-201ENST00000522557 Q9Y3F1 56 aa2.26□□□□□ -2.05
HMGB1P1-201ENST00000522557 TRAPPC1Q9Y5R8 145 aa2.26□□□□□ -2.05
HMGB1P1-201ENST00000522557 A0A0C4DFX4 3053 aa2.26□□□□□ -2.05
HMGB1P1-201ENST00000522557 BRWD1Q9NSI6 2320 aa2.26□□□□□ -2.05
HMGB1P1-201ENST00000522557 BDP1A6H8Y1 2624 aa2.26□□□□□ -2.05
HMGB1P1-201ENST00000522557 MYO7AQ13402 2215 aa2.26□□□□□ -2.05
HMGB1P1-201ENST00000522557 EP300Q09472 2414 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P1-201ENST00000522557 LRRC37AA6NMS7 1700 aa2.25□□□□□ -2.05
HMGB1P1-201ENST00000522557 CACNA1AO00555 2505 aa2.25□□□□□ -2.05
HMGB1P1-201ENST00000522557 LCTP09848 1927 aa2.25□□□□□ -2.05
HMGB1P1-201ENST00000522557 H3BSA7 217 aa2.25□□□□□ -2.05
HMGB1P1-201ENST00000522557 GPR75O95800 540 aa2.25□□□□□ -2.05
HMGB1P1-201ENST00000522557 IGKV1-17P01599 117 aa2.25□□□□□ -2.05
HMGB1P1-201ENST00000522557 P0C880 135 aa2.25□□□□□ -2.05
HMGB1P1-201ENST00000522557 OCMP0CE72 109 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P1-201ENST00000522557 IL9P15248 144 aa2.25□□□□□ -2.05
HMGB1P1-201ENST00000522557 COILP38432 576 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P1-201ENST00000522557 CBX5P45973 191 aa2.25□□□□□ -2.05
HMGB1P1-201ENST00000522557 C10orf91Q5T1B1 145 aa2.25□□□□□ -2.05
HMGB1P1-201ENST00000522557 EBLN2Q6P2I7 272 aa2.25□□□□□ -2.05
HMGB1P1-201ENST00000522557 PLEKHG7Q6ZR37 379 aa2.25□□□□□ -2.05
HMGB1P1-201ENST00000522557 ZFAND2AQ8N6M9 145 aa2.25□□□□□ -2.05
HMGB1P1-201ENST00000522557 FER1L6-AS1Q8NA97 138 aa2.25□□□□□ -2.05
HMGB1P1-201ENST00000522557 BPIFB6Q8NFQ5 453 aa2.25□□□□□ -2.05
HMGB1P1-201ENST00000522557 OR5D18Q8NGL1 313 aa2.25□□□□□ -2.05
HMGB1P1-201ENST00000522557 ZNRF2Q8NHG8 242 aa2.25□□□□□ -2.05
HMGB1P1-201ENST00000522557 PKMYT1Q99640 499 aa2.25□□□□□ -2.05
HMGB1P1-201ENST00000522557 C7orf50Q9BRJ6 194 aaKnown RBP2.25□□□□□ -2.05
HMGB1P1-201ENST00000522557 HDHD2Q9H0R4 259 aa2.25□□□□□ -2.05
HMGB1P1-201ENST00000522557 ATP6V1DQ9Y5K8 247 aa2.25□□□□□ -2.05
HMGB1P1-201ENST00000522557 LAMB2P55268 1798 aa2.25□□□□□ -2.05
HMGB1P1-201ENST00000522557 ZFHX2Q9C0A1 2572 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P1-201ENST00000522557 CHD8Q9HCK8 2581 aa2.25□□□□□ -2.05
HMGB1P1-201ENST00000522557 DDX60Q8IY21 1712 aaKnown RBP2.25□□□□□ -2.05
HMGB1P1-201ENST00000522557 COL4A1P02462 1669 aa2.25□□□□□ -2.05
HMGB1P1-201ENST00000522557 IGKV1D-17A0A075B6S4 117 aa2.24□□□□□ -2.05
HMGB1P1-201ENST00000522557 GGTLC3B5MD39 225 aa2.24□□□□□ -2.05
HMGB1P1-201ENST00000522557 ATP8B1O43520 1251 aa2.24□□□□□ -2.05
HMGB1P1-201ENST00000522557 ASS1P00966 412 aaKnown RBP2.24□□□□□ -2.05
HMGB1P1-201ENST00000522557 OPN1SWP03999 348 aa2.24□□□□□ -2.05
HMGB1P1-201ENST00000522557 PSKH1P11801 424 aa2.24□□□□□ -2.05
HMGB1P1-201ENST00000522557 LGALS3P17931 250 aaKnown RBP2.24□□□□□ -2.05
HMGB1P1-201ENST00000522557 ANP32AP39687 249 aaKnown RBP2.24□□□□□ -2.05
HMGB1P1-201ENST00000522557 HSPA13P48723 471 aa2.24□□□□□ -2.05
HMGB1P1-201ENST00000522557 RAB25P57735 213 aa2.24□□□□□ -2.05
HMGB1P1-201ENST00000522557 IHHQ14623 411 aa2.24□□□□□ -2.05
HMGB1P1-201ENST00000522557 CLEC12BQ2HXU8 276 aa2.24□□□□□ -2.05
HMGB1P1-201ENST00000522557 CENPWQ5EE01 88 aa2.24□□□□□ -2.05
HMGB1P1-201ENST00000522557 DNM1P34Q6PK57 102 aa2.24□□□□□ -2.05
HMGB1P1-201ENST00000522557 SPNS3Q6ZMD2 512 aa2.24□□□□□ -2.05
HMGB1P1-201ENST00000522557 FAM19A5Q7Z5A7 132 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P1-201ENST00000522557 OR5K1Q8NHB7 308 aa2.24□□□□□ -2.05
HMGB1P1-201ENST00000522557 RBP7Q96R05 134 aa2.24□□□□□ -2.05
HMGB1P1-201ENST00000522557 C1QTNF6Q9BXI9 259 aa2.24□□□□□ -2.05
HMGB1P1-201ENST00000522557 ZNHIT6Q9NWK9 470 aaKnown RBP2.24□□□□□ -2.05
HMGB1P1-201ENST00000522557 SPTBN2O15020 2390 aa2.24□□□□□ -2.05
HMGB1P1-201ENST00000522557 ATG2BQ96BY7 2078 aa2.24□□□□□ -2.05
HMGB1P1-201ENST00000522557 RFX7Q2KHR2 1363 aa2.23□□□□□ -2.05
HMGB1P1-201ENST00000522557 LAMB4A4D0S4 1761 aa2.23□□□□□ -2.05
HMGB1P1-201ENST00000522557 KMT2EQ8IZD2 1858 aa2.23□□□□□ -2.05
HMGB1P1-201ENST00000522557 TRBV24-1A0A075B6N3 115 aa2.23□□□□□ -2.05
HMGB1P1-201ENST00000522557 A0A0B4J2C4 111 aa2.23□□□□□ -2.05
HMGB1P1-201ENST00000522557 C1orf232A0A0U1RR37 186 aa2.23□□□□□ -2.05
HMGB1P1-201ENST00000522557 LIN7AO14910 233 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P1-201ENST00000522557 SH2D1AO60880 128 aa2.23□□□□□ -2.05
HMGB1P1-201ENST00000522557 BIKQ13323 160 aa2.23□□□□□ -2.05
HMGB1P1-201ENST00000522557 MED21Q13503 144 aa2.23□□□□□ -2.05
HMGB1P1-201ENST00000522557 PDGFRLQ15198 375 aa2.23□□□□□ -2.05
HMGB1P1-201ENST00000522557 BCL2A1Q16548 175 aa2.23□□□□□ -2.05
HMGB1P1-201ENST00000522557 SPATA31B1PQ5VZV4 182 aa2.23□□□□□ -2.05
HMGB1P1-201ENST00000522557 LYZL2Q7Z4W2 148 aa2.23□□□□□ -2.05
HMGB1P1-201ENST00000522557 LRP11Q86VZ4 500 aa2.23□□□□□ -2.05
HMGB1P1-201ENST00000522557 FUNDC1Q8IVP5 155 aa2.23□□□□□ -2.05
HMGB1P1-201ENST00000522557 TNFAIP8L1Q8WVP5 186 aa2.23□□□□□ -2.05
HMGB1P1-201ENST00000522557 PPCDCQ96CD2 204 aa2.23□□□□□ -2.05
HMGB1P1-201ENST00000522557 TRIB3Q96RU7 358 aa2.23□□□□□ -2.05
HMGB1P1-201ENST00000522557 SLC22A4Q9H015 551 aa2.23□□□□□ -2.05
HMGB1P1-201ENST00000522557 PLEKHJ1Q9NW61 149 aa2.23□□□□□ -2.05
HMGB1P1-201ENST00000522557 TMEM216Q9P0N5 145 aa2.23□□□□□ -2.05
HMGB1P1-201ENST00000522557 TRPM6Q9BX84 2022 aa2.23□□□□□ -2.05
HMGB1P1-201ENST00000522557 PSME4Q14997 1843 aa2.23□□□□□ -2.05
HMGB1P1-201ENST00000522557 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
HMGB1P1-201ENST00000522557 TINCRA0A1B0GVN0 87 aa2.22□□□□□ -2.05
HMGB1P1-201ENST00000522557 D6RAR5 112 aa2.22□□□□□ -2.05
HMGB1P1-201ENST00000522557 PLXNB1O43157 2135 aa2.22□□□□□ -2.05
HMGB1P1-201ENST00000522557 HPGDSO60760 199 aa2.22□□□□□ -2.05
HMGB1P1-201ENST00000522557 KLHL2O95198 593 aa2.22□□□□□ -2.05
HMGB1P1-201ENST00000522557 IGHMP01871 453 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 214.7 ms