RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 TRGV3P03979 118 aa12.53□□□□□ -0.4
IGHV3-42-201ENST00000520410 IGKV1-16P04430 117 aa12.53□□□□□ -0.4
IGHV3-42-201ENST00000520410 FCGR3AP08637 254 aa12.53□□□□□ -0.4
IGHV3-42-201ENST00000520410 LGALS1P09382 135 aaKnown RBP12.53□□□□□ -0.4
IGHV3-42-201ENST00000520410 GSTT2P0CG29 244 aa12.53□□□□□ -0.4
IGHV3-42-201ENST00000520410 GSTT2BP0CG30 244 aa12.53□□□□□ -0.4
IGHV3-42-201ENST00000520410 PSMB9P28065 219 aa12.53□□□□□ -0.4
IGHV3-42-201ENST00000520410 PITPNAQ00169 270 aa12.53□□□□□ -0.4
IGHV3-42-201ENST00000520410 SSX1Q16384 188 aa12.53□□□□□ -0.4
IGHV3-42-201ENST00000520410 IGSF11Q5DX21 431 aa12.53□□□□□ -0.4
IGHV3-42-201ENST00000520410 C22orf42Q6IC83 251 aa12.53□□□□□ -0.4
IGHV3-42-201ENST00000520410 PYHIN1Q6K0P9 492 aa12.53□□□□□ -0.4
IGHV3-42-201ENST00000520410 ZNF383Q8NA42 475 aa12.53□□□□□ -0.4
IGHV3-42-201ENST00000520410 MINDY2Q8NBR6 621 aa12.53□□□□□ -0.4
IGHV3-42-201ENST00000520410 MYOZ3Q8TDC0 251 aa12.53□□□□□ -0.4
IGHV3-42-201ENST00000520410 PHB2Q99623 299 aa12.53□□□□□ -0.4
IGHV3-42-201ENST00000520410 AGMATQ9BSE5 352 aa12.53□□□□□ -0.4
IGHV3-42-201ENST00000520410 ZNF230Q9UIE0 474 aaPredicted RBP12.53□□□□□ -0.4
IGHV3-42-201ENST00000520410 IGKV1-6A0A0C4DH72 117 aa12.52□□□□□ -0.41
IGHV3-42-201ENST00000520410 J3QRK9 145 aa12.52□□□□□ -0.41
IGHV3-42-201ENST00000520410 SOX15O60248 233 aa12.52□□□□□ -0.41
IGHV3-42-201ENST00000520410 SPDEFO95238 335 aa12.52□□□□□ -0.41
IGHV3-42-201ENST00000520410 CD37P11049 281 aa12.52□□□□□ -0.41
IGHV3-42-201ENST00000520410 FXYD3Q14802 87 aa12.52□□□□□ -0.41
IGHV3-42-201ENST00000520410 ASPHD1Q5U4P2 390 aa12.52□□□□□ -0.41
IGHV3-42-201ENST00000520410 HARBI1Q96MB7 349 aa12.52□□□□□ -0.41
IGHV3-42-201ENST00000520410 RNF5Q99942 180 aa12.52□□□□□ -0.41
IGHV3-42-201ENST00000520410 RSRP1Q9BUV0 290 aa12.52□□□□□ -0.41
IGHV3-42-201ENST00000520410 TPSG1Q9NRR2 321 aa12.52□□□□□ -0.41
IGHV3-42-201ENST00000520410 NDUFB11Q9NX14 153 aa12.52□□□□□ -0.41
IGHV3-42-201ENST00000520410 SCOCQ9UIL1 159 aa12.52□□□□□ -0.41
IGHV3-42-201ENST00000520410 C13orf42A0A1B0GVH6 325 aa12.51□□□□□ -0.41
IGHV3-42-201ENST00000520410 IFITM5A6NNB3 132 aa12.51□□□□□ -0.41
IGHV3-42-201ENST00000520410 SHOXO15266 292 aa12.51□□□□□ -0.41
IGHV3-42-201ENST00000520410 HIST1H1DP16402 221 aaKnown RBP12.51□□□□□ -0.41
IGHV3-42-201ENST00000520410 INSL3P51460 131 aa12.51□□□□□ -0.41
IGHV3-42-201ENST00000520410 RUNX1Q01196 453 aa12.51□□□□□ -0.41
IGHV3-42-201ENST00000520410 KIAA0141Q14154 515 aaPredicted RBP12.51□□□□□ -0.41
IGHV3-42-201ENST00000520410 RTL8BQ17RB0 113 aa12.51□□□□□ -0.41
IGHV3-42-201ENST00000520410 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.51□□□□□ -0.41
IGHV3-42-201ENST00000520410 BVESQ8NE79 360 aa12.51□□□□□ -0.41
IGHV3-42-201ENST00000520410 OR5T1Q8NG75 326 aa12.51□□□□□ -0.41
IGHV3-42-201ENST00000520410 DLX4Q92988 240 aaPredicted RBP12.51□□□□□ -0.41
IGHV3-42-201ENST00000520410 PTX4Q96A99 478 aa12.51□□□□□ -0.41
IGHV3-42-201ENST00000520410 WWC2-AS2Q96NR7 200 aa12.51□□□□□ -0.41
IGHV3-42-201ENST00000520410 TOLLIPQ9H0E2 274 aa12.51□□□□□ -0.41
IGHV3-42-201ENST00000520410 RAB26Q9ULW5 256 aa12.51□□□□□ -0.41
IGHV3-42-201ENST00000520410 TRAV1-2A0A0B4J238 106 aa12.5□□□□□ -0.41
IGHV3-42-201ENST00000520410 LDLRAD4O15165 306 aa12.5□□□□□ -0.41
IGHV3-42-201ENST00000520410 SNRPBP14678 240 aaKnown RBP12.5□□□□□ -0.41
IGHV3-42-201ENST00000520410 ZNF562Q6V9R5 426 aa12.5□□□□□ -0.41
IGHV3-42-201ENST00000520410 ZNF429Q86V71 674 aa12.5□□□□□ -0.41
IGHV3-42-201ENST00000520410 OR4C12Q96R67 309 aa12.5□□□□□ -0.41
IGHV3-42-201ENST00000520410 Q9H521 79 aa12.5□□□□□ -0.41
IGHV3-42-201ENST00000520410 SLA2Q9H6Q3 261 aa12.5□□□□□ -0.41
IGHV3-42-201ENST00000520410 SDHAF2Q9NX18 166 aa12.5□□□□□ -0.41
IGHV3-42-201ENST00000520410 NUBP2Q9Y5Y2 271 aa12.5□□□□□ -0.41
IGHV3-42-201ENST00000520410 TRDV1A0A1B0GX56 115 aa12.49□□□□□ -0.41
IGHV3-42-201ENST00000520410 SHISA3A0PJX4 238 aa12.49□□□□□ -0.41
IGHV3-42-201ENST00000520410 ANKRD34BA5PLL1 514 aa12.49□□□□□ -0.41
IGHV3-42-201ENST00000520410 MFNGO00587 321 aa12.49□□□□□ -0.41
IGHV3-42-201ENST00000520410 MPPED1O15442 326 aa12.49□□□□□ -0.41
IGHV3-42-201ENST00000520410 APELAP0DMC3 54 aa12.49□□□□□ -0.41
IGHV3-42-201ENST00000520410 EGR2P11161 476 aaPredicted RBP12.49□□□□□ -0.41
IGHV3-42-201ENST00000520410 RAB6AP20340 208 aa12.49□□□□□ -0.41
IGHV3-42-201ENST00000520410 CRIP2P52943 208 aaPredicted RBP12.49□□□□□ -0.41
IGHV3-42-201ENST00000520410 GABARAPL2P60520 117 aa12.49□□□□□ -0.41
IGHV3-42-201ENST00000520410 AKIRIN2Q53H80 203 aa12.49□□□□□ -0.41
IGHV3-42-201ENST00000520410 CD200R1LQ6Q8B3 271 aa12.49□□□□□ -0.41
IGHV3-42-201ENST00000520410 OR6Q1Q8NGQ2 317 aa12.49□□□□□ -0.41
IGHV3-42-201ENST00000520410 DCUN1D5Q9BTE7 237 aa12.49□□□□□ -0.41
IGHV3-42-201ENST00000520410 CABLES2Q9BTV7 478 aa12.49□□□□□ -0.41
IGHV3-42-201ENST00000520410 COA4Q9NYJ1 87 aa12.49□□□□□ -0.41
IGHV3-42-201ENST00000520410 KCNK7Q9Y2U2 307 aa12.49□□□□□ -0.41
IGHV3-42-201ENST00000520410 SMAD5-AS1Q9Y6J3 95 aa12.49□□□□□ -0.41
IGHV3-42-201ENST00000520410 U3KQK5 164 aa12.49□□□□□ -0.41
IGHV3-42-201ENST00000520410 PROP1O75360 226 aa12.48□□□□□ -0.41
IGHV3-42-201ENST00000520410 HSPB1P04792 205 aaKnown RBP12.48□□□□□ -0.41
IGHV3-42-201ENST00000520410 NHLRC4P0CG21 123 aaPredicted RBP12.48□□□□□ -0.41
IGHV3-42-201ENST00000520410 DEFA5Q01523 94 aa12.48□□□□□ -0.41
IGHV3-42-201ENST00000520410 TNXAQ16473 311 aa12.48□□□□□ -0.41
IGHV3-42-201ENST00000520410 SRSF7Q16629 238 aaKnown RBP eCLIP12.48□□□□□ -0.41
IGHV3-42-201ENST00000520410 VMA21Q3ZAQ7 101 aa12.48□□□□□ -0.41
IGHV3-42-201ENST00000520410 C19orf54Q5BKX5 351 aa12.48□□□□□ -0.41
IGHV3-42-201ENST00000520410 POC5Q8NA72 575 aa12.48□□□□□ -0.41
IGHV3-42-201ENST00000520410 ACOT12Q8WYK0 555 aa12.48□□□□□ -0.41
IGHV3-42-201ENST00000520410 ST6GALNAC5Q9BVH7 336 aa12.48□□□□□ -0.41
IGHV3-42-201ENST00000520410 ELOVL1Q9BW60 279 aa12.48□□□□□ -0.41
IGHV3-42-201ENST00000520410 LSM4Q9Y4Z0 139 aaKnown RBP12.48□□□□□ -0.41
IGHV3-42-201ENST00000520410 TRBV6-7A0A0A0MS04 114 aa12.47□□□□□ -0.41
IGHV3-42-201ENST00000520410 ARPC1BO15143 372 aaKnown RBP12.47□□□□□ -0.41
IGHV3-42-201ENST00000520410 ATP6V1G2O95670 118 aa12.47□□□□□ -0.41
IGHV3-42-201ENST00000520410 CRYZL1O95825 349 aa12.47□□□□□ -0.41
IGHV3-42-201ENST00000520410 SPNP16150 400 aa12.47□□□□□ -0.41
IGHV3-42-201ENST00000520410 LGALS7P47929 136 aa12.47□□□□□ -0.41
IGHV3-42-201ENST00000520410 GNG2P59768 71 aa12.47□□□□□ -0.41
IGHV3-42-201ENST00000520410 PJVKQ0ZLH3 352 aa12.47□□□□□ -0.41
IGHV3-42-201ENST00000520410 ARL6IP1Q15041 203 aa12.47□□□□□ -0.41
IGHV3-42-201ENST00000520410 HAPLN4Q86UW8 402 aa12.47□□□□□ -0.41
IGHV3-42-201ENST00000520410 DAPK2Q9UIK4 370 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 916.1 ms