RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 OR8I2Q8N0Y5 310 aa11.45□□□□□ -0.58
PABPC1-208ENST00000519004 OR8B3Q8NGG8 313 aa11.45□□□□□ -0.58
PABPC1-208ENST00000519004 OR51H1Q8NH63 302 aa11.45□□□□□ -0.58
PABPC1-208ENST00000519004 OR8B2Q96RD0 313 aa11.45□□□□□ -0.58
PABPC1-208ENST00000519004 PEF1Q9UBV8 284 aaKnown RBP11.45□□□□□ -0.58
PABPC1-208ENST00000519004 SCO2A0A1W2PP80 73 aa11.44□□□□□ -0.58
PABPC1-208ENST00000519004 C22orf46C9J442 243 aa11.44□□□□□ -0.58
PABPC1-208ENST00000519004 IGKV1-5P01602 117 aa11.44□□□□□ -0.58
PABPC1-208ENST00000519004 SERPINE2P07093 398 aa11.44□□□□□ -0.58
PABPC1-208ENST00000519004 CST6Q15828 149 aa11.44□□□□□ -0.58
PABPC1-208ENST00000519004 RSPO1Q2MKA7 263 aaPredicted RBP11.44□□□□□ -0.58
PABPC1-208ENST00000519004 RALGAPA1Q6GYQ0 2036 aa11.44□□□□□ -0.58
PABPC1-208ENST00000519004 ZNF439Q8NDP4 499 aa11.44□□□□□ -0.58
PABPC1-208ENST00000519004 LSM10Q969L4 123 aaKnown RBP11.44□□□□□ -0.58
PABPC1-208ENST00000519004 HRASLS2Q9NWW9 162 aa11.44□□□□□ -0.58
PABPC1-208ENST00000519004 DEC1Q9P2X7 70 aa11.44□□□□□ -0.58
PABPC1-208ENST00000519004 FAM181BA6NEQ2 426 aa11.44□□□□□ -0.58
PABPC1-208ENST00000519004 LIPT2A6NK58 231 aa11.44□□□□□ -0.58
PABPC1-208ENST00000519004 RAB29O14966 203 aa11.44□□□□□ -0.58
PABPC1-208ENST00000519004 CA7P43166 264 aa11.44□□□□□ -0.58
PABPC1-208ENST00000519004 HTD2P86397 168 aa11.44□□□□□ -0.58
PABPC1-208ENST00000519004 PLCXD2Q0VAA5 305 aa11.44□□□□□ -0.58
PABPC1-208ENST00000519004 WDR73Q6P4I2 378 aa11.44□□□□□ -0.58
PABPC1-208ENST00000519004 OR1L1Q8NH94 360 aa11.44□□□□□ -0.58
PABPC1-208ENST00000519004 PATE1Q8WXA2 126 aa11.44□□□□□ -0.58
PABPC1-208ENST00000519004 LRRC61Q9BV99 259 aa11.44□□□□□ -0.58
PABPC1-208ENST00000519004 PPIAL4EA0A075B759 164 aa11.43□□□□□ -0.58
PABPC1-208ENST00000519004 PPIAL4CA0A0B4J2A2 164 aa11.43□□□□□ -0.58
PABPC1-208ENST00000519004 IGKV1-6A0A0C4DH72 117 aa11.43□□□□□ -0.58
PABPC1-208ENST00000519004 A0A1W2PQU0 124 aa11.43□□□□□ -0.58
PABPC1-208ENST00000519004 PPIAL4DF5H284 164 aa11.43□□□□□ -0.58
PABPC1-208ENST00000519004 CGAP01215 116 aa11.43□□□□□ -0.58
PABPC1-208ENST00000519004 IGKV3-11P04433 115 aa11.43□□□□□ -0.58
PABPC1-208ENST00000519004 LINC00869P0C866 280 aa11.43□□□□□ -0.58
PABPC1-208ENST00000519004 PPIAL4FP0DN26 164 aa11.43□□□□□ -0.58
PABPC1-208ENST00000519004 SCGB1A1P11684 91 aa11.43□□□□□ -0.58
PABPC1-208ENST00000519004 SSTR5P35346 364 aa11.43□□□□□ -0.58
PABPC1-208ENST00000519004 SELENOVP59797 346 aa11.43□□□□□ -0.58
PABPC1-208ENST00000519004 SLC25A40Q8TBP6 338 aa11.43□□□□□ -0.58
PABPC1-208ENST00000519004 TMEM147Q9BVK8 224 aa11.43□□□□□ -0.58
PABPC1-208ENST00000519004 NPCDR1Q9BY65 106 aa11.43□□□□□ -0.58
PABPC1-208ENST00000519004 V9GYV3 84 aa11.43□□□□□ -0.58
PABPC1-208ENST00000519004 M0R296 226 aa11.43□□□□□ -0.58
PABPC1-208ENST00000519004 RBM11P57052 281 aaKnown RBP11.43□□□□□ -0.58
PABPC1-208ENST00000519004 C2orf27AQ580R0 203 aa11.43□□□□□ -0.58
PABPC1-208ENST00000519004 C12orf54Q6X4T0 127 aa11.43□□□□□ -0.58
PABPC1-208ENST00000519004 SCCPDHQ8NBX0 429 aa11.43□□□□□ -0.58
PABPC1-208ENST00000519004 ALKBH4Q9NXW9 302 aa11.43□□□□□ -0.58
PABPC1-208ENST00000519004 SPAG17Q6Q759 2223 aa11.42□□□□□ -0.58
PABPC1-208ENST00000519004 GAGE10A6NGK3 116 aa11.42□□□□□ -0.58
PABPC1-208ENST00000519004 C2orf70A6NJV1 201 aa11.42□□□□□ -0.58
PABPC1-208ENST00000519004 SPINK4O60575 86 aa11.42□□□□□ -0.58
PABPC1-208ENST00000519004 UBE2G1P62253 170 aa11.42□□□□□ -0.58
PABPC1-208ENST00000519004 RPS21P63220 83 aaKnown RBP11.42□□□□□ -0.58
PABPC1-208ENST00000519004 TMEM249Q2WGJ8 235 aa11.42□□□□□ -0.58
PABPC1-208ENST00000519004 NEGR1Q7Z3B1 354 aa11.42□□□□□ -0.58
PABPC1-208ENST00000519004 TSACCQ96A04 125 aaPredicted RBP11.42□□□□□ -0.58
PABPC1-208ENST00000519004 BMFQ96LC9 184 aa11.42□□□□□ -0.58
PABPC1-208ENST00000519004 TMEM204Q9BSN7 226 aa11.42□□□□□ -0.58
PABPC1-208ENST00000519004 ST20Q9HBF5 79 aa11.42□□□□□ -0.58
PABPC1-208ENST00000519004 CLEC5AQ9NY25 188 aa11.42□□□□□ -0.58
PABPC1-208ENST00000519004 H3BML4 177 aa11.41□□□□□ -0.58
PABPC1-208ENST00000519004 OR7C1O76099 320 aaPredicted RBP11.41□□□□□ -0.58
PABPC1-208ENST00000519004 NPY1RP25929 384 aa11.41□□□□□ -0.58
PABPC1-208ENST00000519004 GDF1P27539 372 aa11.41□□□□□ -0.58
PABPC1-208ENST00000519004 CX3CL1P78423 397 aa11.41□□□□□ -0.58
PABPC1-208ENST00000519004 ARF1P84077 181 aaKnown RBP11.41□□□□□ -0.58
PABPC1-208ENST00000519004 KIAA0895LQ68EN5 471 aa11.41□□□□□ -0.58
PABPC1-208ENST00000519004 OR10G3Q8NGC4 313 aa11.41□□□□□ -0.58
PABPC1-208ENST00000519004 BORCS8Q96FH0 119 aa11.41□□□□□ -0.58
PABPC1-208ENST00000519004 GP6Q9HCN6 339 aa11.41□□□□□ -0.58
PABPC1-208ENST00000519004 ABI3Q9P2A4 366 aa11.41□□□□□ -0.58
PABPC1-208ENST00000519004 HTTP42858 3142 aa11.41□□□□□ -0.58
PABPC1-208ENST00000519004 A0A1B0GV72 72 aa11.41□□□□□ -0.58
PABPC1-208ENST00000519004 PRSS12P56730 875 aa11.41□□□□□ -0.58
PABPC1-208ENST00000519004 CNN3Q15417 329 aaKnown RBP11.41□□□□□ -0.58
PABPC1-208ENST00000519004 TNXAQ16473 311 aa11.41□□□□□ -0.58
PABPC1-208ENST00000519004 PSG3Q16557 428 aa11.41□□□□□ -0.58
PABPC1-208ENST00000519004 HLA-BQ31612 363 aa11.41□□□□□ -0.58
PABPC1-208ENST00000519004 PHYHD1Q5SRE7 291 aa11.41□□□□□ -0.58
PABPC1-208ENST00000519004 LHFPL2Q6ZUX7 228 aa11.41□□□□□ -0.58
PABPC1-208ENST00000519004 SFTPA2Q8IWL1 248 aa11.41□□□□□ -0.58
PABPC1-208ENST00000519004 NINJ1Q92982 152 aa11.41□□□□□ -0.58
PABPC1-208ENST00000519004 MMABQ96EY8 250 aaPredicted RBP11.41□□□□□ -0.58
PABPC1-208ENST00000519004 CRIM1Q9NZV1 1036 aa11.41□□□□□ -0.58
PABPC1-208ENST00000519004 WNT16Q9UBV4 365 aa11.41□□□□□ -0.58
PABPC1-208ENST00000519004 RTTNQ86VV8 2226 aa11.41□□□□□ -0.58
PABPC1-208ENST00000519004 TDRD6O60522 2096 aaKnown RBP11.4□□□□□ -0.58
PABPC1-208ENST00000519004 NCOA6Q14686 2063 aaPredicted RBP11.4□□□□□ -0.58
PABPC1-208ENST00000519004 TRAV38-1A0A0B4J264 116 aa11.4□□□□□ -0.58
PABPC1-208ENST00000519004 C2orf72A6NCS6 295 aa11.4□□□□□ -0.58
PABPC1-208ENST00000519004 PMS2P5A8MQ11 134 aa11.4□□□□□ -0.58
PABPC1-208ENST00000519004 SHISA8B8ZZ34 492 aa11.4□□□□□ -0.58
PABPC1-208ENST00000519004 SLC31A1O15431 190 aa11.4□□□□□ -0.58
PABPC1-208ENST00000519004 CLDN1O95832 211 aa11.4□□□□□ -0.58
PABPC1-208ENST00000519004 OTX2P32243 289 aa11.4□□□□□ -0.58
PABPC1-208ENST00000519004 SCGB2A2Q13296 93 aa11.4□□□□□ -0.58
PABPC1-208ENST00000519004 GCSAMLQ5JQS6 135 aa11.4□□□□□ -0.58
PABPC1-208ENST00000519004 RNFT1Q5M7Z0 435 aa11.4□□□□□ -0.58
PABPC1-208ENST00000519004 DEFB128Q7Z7B8 93 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms