RNA–Protein interactions for RNA: ENST00000516549.1

RN7SKP135-201, Transcript of RNA, 7SK small nuclear pseudogene 135, humanhuman

BASIC

Gene RN7SKP135, Length 247 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP135-201ENST00000516549 RPS16P62249 146 aaKnown RBP8.56□□□□□ -1.04
RN7SKP135-201ENST00000516549 RPL23AP62750 156 aaKnown RBP8.56□□□□□ -1.04
RN7SKP135-201ENST00000516549 FOXE3Q13461 319 aa8.56□□□□□ -1.04
RN7SKP135-201ENST00000516549 TCTEX1D4Q5JR98 221 aa8.56□□□□□ -1.04
RN7SKP135-201ENST00000516549 TMEM69Q5SWH9 247 aa8.56□□□□□ -1.04
RN7SKP135-201ENST00000516549 ZNF660Q6AZW8 331 aaPredicted RBP8.56□□□□□ -1.04
RN7SKP135-201ENST00000516549 ANKRD13BQ86YJ7 626 aa8.56□□□□□ -1.04
RN7SKP135-201ENST00000516549 DRAXINQ8NBI3 349 aaPredicted RBP8.56□□□□□ -1.04
RN7SKP135-201ENST00000516549 BEST4Q8NFU0 473 aa8.56□□□□□ -1.04
RN7SKP135-201ENST00000516549 AP3S1Q92572 193 aa8.56□□□□□ -1.04
RN7SKP135-201ENST00000516549 CMTM3Q96MX0 182 aa8.56□□□□□ -1.04
RN7SKP135-201ENST00000516549 HSPB9Q9BQS6 159 aa8.56□□□□□ -1.04
RN7SKP135-201ENST00000516549 OR51J1Q9H342 316 aa8.56□□□□□ -1.04
RN7SKP135-201ENST00000516549 AUNIPQ9H7T9 357 aa8.56□□□□□ -1.04
RN7SKP135-201ENST00000516549 PARP11Q9NR21 331 aa8.56□□□□□ -1.04
RN7SKP135-201ENST00000516549 SLC35D1Q9NTN3 355 aa8.56□□□□□ -1.04
RN7SKP135-201ENST00000516549 SDHAF2Q9NX18 166 aa8.56□□□□□ -1.04
RN7SKP135-201ENST00000516549 LINC00527Q9UJ94 153 aa8.56□□□□□ -1.04
RN7SKP135-201ENST00000516549 OR2W1Q9Y3N9 320 aa8.56□□□□□ -1.04
RN7SKP135-201ENST00000516549 SSX5O60225 188 aa8.55□□□□□ -1.04
RN7SKP135-201ENST00000516549 SMIM18P0DKX4 95 aa8.55□□□□□ -1.04
RN7SKP135-201ENST00000516549 CD33P20138 364 aa8.55□□□□□ -1.04
RN7SKP135-201ENST00000516549 CNTFRP26992 372 aa8.55□□□□□ -1.04
RN7SKP135-201ENST00000516549 TGFBR1P36897 503 aa8.55□□□□□ -1.04
RN7SKP135-201ENST00000516549 RORCP51449 518 aa8.55□□□□□ -1.04
RN7SKP135-201ENST00000516549 VBP1P61758 197 aa8.55□□□□□ -1.04
RN7SKP135-201ENST00000516549 NCS1P62166 190 aa8.55□□□□□ -1.04
RN7SKP135-201ENST00000516549 TMEM267Q0VDI3 215 aaPredicted RBP8.55□□□□□ -1.04
RN7SKP135-201ENST00000516549 HIST2H2BDQ6DRA6 164 aa8.55□□□□□ -1.04
RN7SKP135-201ENST00000516549 MZT2AQ6P582 158 aa8.55□□□□□ -1.04
RN7SKP135-201ENST00000516549 TMEM65Q6PI78 240 aa8.55□□□□□ -1.04
RN7SKP135-201ENST00000516549 C10orf99Q6UWK7 81 aa8.55□□□□□ -1.04
RN7SKP135-201ENST00000516549 GPR141Q7Z602 305 aa8.55□□□□□ -1.04
RN7SKP135-201ENST00000516549 HOGA1Q86XE5 327 aa8.55□□□□□ -1.04
RN7SKP135-201ENST00000516549 ZNF645Q8N7E2 425 aa8.55□□□□□ -1.04
RN7SKP135-201ENST00000516549 TCTEX1D1Q8N7M0 179 aa8.55□□□□□ -1.04
RN7SKP135-201ENST00000516549 ZNF383Q8NA42 475 aa8.55□□□□□ -1.04
RN7SKP135-201ENST00000516549 ABHD5Q8WTS1 349 aa8.55□□□□□ -1.04
RN7SKP135-201ENST00000516549 FBXL15Q9H469 300 aa8.55□□□□□ -1.04
RN7SKP135-201ENST00000516549 IFT46Q9NQC8 304 aa8.55□□□□□ -1.04
RN7SKP135-201ENST00000516549 NECAP2Q9NVZ3 263 aa8.55□□□□□ -1.04
RN7SKP135-201ENST00000516549 METTL1Q9UBP6 276 aaKnown RBP8.55□□□□□ -1.04
RN7SKP135-201ENST00000516549 PRELID3BQ9Y3B1 194 aa8.55□□□□□ -1.04
RN7SKP135-201ENST00000516549 TRRAPQ9Y4A5 3859 aa8.54□□□□□ -1.04
RN7SKP135-201ENST00000516549 IGKV1D-8A0A087WSZ0 117 aa8.54□□□□□ -1.04
RN7SKP135-201ENST00000516549 IGHV7-81A0A0B4J1V7 117 aa8.54□□□□□ -1.04
RN7SKP135-201ENST00000516549 TRAV41A0A0B4J266 112 aa8.54□□□□□ -1.04
RN7SKP135-201ENST00000516549 LINC01548A6NM66 108 aa8.54□□□□□ -1.04
RN7SKP135-201ENST00000516549 ATP6V0E1O15342 81 aa8.54□□□□□ -1.04
RN7SKP135-201ENST00000516549 PROP1O75360 226 aa8.54□□□□□ -1.04
RN7SKP135-201ENST00000516549 GABARAPO95166 117 aa8.54□□□□□ -1.04
RN7SKP135-201ENST00000516549 DUS4LO95620 317 aaKnown RBP8.54□□□□□ -1.04
RN7SKP135-201ENST00000516549 IGHG4P01861 327 aa8.54□□□□□ -1.04
RN7SKP135-201ENST00000516549 HLA-DQB1P01920 261 aa8.54□□□□□ -1.04
RN7SKP135-201ENST00000516549 APOA1P02647 267 aa8.54□□□□□ -1.04
RN7SKP135-201ENST00000516549 NFYAP23511 347 aaPredicted RBP8.54□□□□□ -1.04
RN7SKP135-201ENST00000516549 ZNF695Q8IW36 515 aa8.54□□□□□ -1.04
RN7SKP135-201ENST00000516549 RNF152Q8N8N0 203 aa8.54□□□□□ -1.04
RN7SKP135-201ENST00000516549 KLHL30-AS1Q8NEE0 82 aa8.54□□□□□ -1.04
RN7SKP135-201ENST00000516549 BORCS5Q969J3 196 aa8.54□□□□□ -1.04
RN7SKP135-201ENST00000516549 RITA1Q96K30 269 aa8.54□□□□□ -1.04
RN7SKP135-201ENST00000516549 HARBI1Q96MB7 349 aa8.54□□□□□ -1.04
RN7SKP135-201ENST00000516549 GPR61Q9BZJ8 451 aa8.54□□□□□ -1.04
RN7SKP135-201ENST00000516549 MRPS7Q9Y2R9 242 aaKnown RBP8.54□□□□□ -1.04
RN7SKP135-201ENST00000516549 PKD1L1Q8TDX9 2849 aa8.53□□□□□ -1.04
RN7SKP135-201ENST00000516549 SHOXO15266 292 aa8.53□□□□□ -1.04
RN7SKP135-201ENST00000516549 CREBL2O60519 120 aaPredicted RBP8.53□□□□□ -1.04
RN7SKP135-201ENST00000516549 IGKV1-16P04430 117 aa8.53□□□□□ -1.04
RN7SKP135-201ENST00000516549 CD40LGP29965 261 aa8.53□□□□□ -1.04
RN7SKP135-201ENST00000516549 DUTP33316 252 aaKnown RBP8.53□□□□□ -1.04
RN7SKP135-201ENST00000516549 PRSS3P35030 304 aa8.53□□□□□ -1.04
RN7SKP135-201ENST00000516549 TAS2R20P59543 309 aa8.53□□□□□ -1.04
RN7SKP135-201ENST00000516549 DEFA6Q01524 100 aa8.53□□□□□ -1.04
RN7SKP135-201ENST00000516549 CFHR3Q02985 330 aa8.53□□□□□ -1.04
RN7SKP135-201ENST00000516549 PSG5Q15238 335 aa8.53□□□□□ -1.04
RN7SKP135-201ENST00000516549 MSMO1Q15800 293 aa8.53□□□□□ -1.04
RN7SKP135-201ENST00000516549 VMA21Q3ZAQ7 101 aa8.53□□□□□ -1.04
RN7SKP135-201ENST00000516549 GPR107Q5VW38 600 aa8.53□□□□□ -1.04
RN7SKP135-201ENST00000516549 PYHIN1Q6K0P9 492 aa8.53□□□□□ -1.04
RN7SKP135-201ENST00000516549 ZNF562Q6V9R5 426 aa8.53□□□□□ -1.04
RN7SKP135-201ENST00000516549 KCTD9Q7L273 389 aa8.53□□□□□ -1.04
RN7SKP135-201ENST00000516549 BVESQ8NE79 360 aa8.53□□□□□ -1.04
RN7SKP135-201ENST00000516549 OR5AP2Q8NGF4 316 aa8.53□□□□□ -1.04
RN7SKP135-201ENST00000516549 OSR1Q8TAX0 266 aaPredicted RBP8.53□□□□□ -1.04
RN7SKP135-201ENST00000516549 HSD17B10Q99714 261 aaKnown RBP8.53□□□□□ -1.04
RN7SKP135-201ENST00000516549 NDUFA13Q9P0J0 144 aa8.53□□□□□ -1.04
RN7SKP135-201ENST00000516549 COMMD3Q9UBI1 195 aa8.53□□□□□ -1.04
RN7SKP135-201ENST00000516549 NOTCH3Q9UM47 2321 aa8.53□□□□□ -1.04
RN7SKP135-201ENST00000516549 SLC25A17O43808 307 aa8.52□□□□□ -1.05
RN7SKP135-201ENST00000516549 NOL3O60936 208 aaKnown RBP8.52□□□□□ -1.05
RN7SKP135-201ENST00000516549 TUSC2O75896 110 aa8.52□□□□□ -1.05
RN7SKP135-201ENST00000516549 ZNF182P17025 639 aaPredicted RBP8.52□□□□□ -1.05
RN7SKP135-201ENST00000516549 PSMB8P28062 276 aa8.52□□□□□ -1.05
RN7SKP135-201ENST00000516549 FCGR2CP31995 323 aa8.52□□□□□ -1.05
RN7SKP135-201ENST00000516549 MYCNOSP40205 109 aa8.52□□□□□ -1.05
RN7SKP135-201ENST00000516549 CDX1P47902 265 aaPredicted RBP8.52□□□□□ -1.05
RN7SKP135-201ENST00000516549 ALDH3B2P48448 385 aa8.52□□□□□ -1.05
RN7SKP135-201ENST00000516549 CRIP2P52943 208 aaPredicted RBP8.52□□□□□ -1.05
RN7SKP135-201ENST00000516549 TAS2R46P59540 309 aa8.52□□□□□ -1.05
RN7SKP135-201ENST00000516549 CX3CL1P78423 397 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms