RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 HLA-DQB1P01920 261 aa10.03□□□□□ -0.8
CLCN3-210ENST00000515420 IGKV1-16P04430 117 aa10.03□□□□□ -0.8
CLCN3-210ENST00000515420 LGALS7P47929 136 aa10.03□□□□□ -0.8
CLCN3-210ENST00000515420 LUMP51884 338 aaPredicted RBP10.03□□□□□ -0.8
CLCN3-210ENST00000515420 DEFA6Q01524 100 aa10.03□□□□□ -0.8
CLCN3-210ENST00000515420 CBX3Q13185 183 aa10.03□□□□□ -0.8
CLCN3-210ENST00000515420 PLGLAQ15195 96 aa10.03□□□□□ -0.8
CLCN3-210ENST00000515420 KPRPQ5T749 579 aaPredicted RBP10.03□□□□□ -0.8
CLCN3-210ENST00000515420 HOGA1Q86XE5 327 aa10.03□□□□□ -0.8
CLCN3-210ENST00000515420 ANKRD13BQ86YJ7 626 aa10.03□□□□□ -0.8
CLCN3-210ENST00000515420 ZNF645Q8N7E2 425 aa10.03□□□□□ -0.8
CLCN3-210ENST00000515420 TCTEX1D1Q8N7M0 179 aa10.03□□□□□ -0.8
CLCN3-210ENST00000515420 DRAXINQ8NBI3 349 aaPredicted RBP10.03□□□□□ -0.8
CLCN3-210ENST00000515420 BEST4Q8NFU0 473 aa10.03□□□□□ -0.8
CLCN3-210ENST00000515420 ACOT12Q8WYK0 555 aa10.03□□□□□ -0.8
CLCN3-210ENST00000515420 FLYWCH2Q96CP2 140 aaKnown RBP10.03□□□□□ -0.8
CLCN3-210ENST00000515420 RBMXL1Q96E39 390 aaKnown RBP10.03□□□□□ -0.8
CLCN3-210ENST00000515420 MRPS26Q9BYN8 205 aaKnown RBP10.03□□□□□ -0.8
CLCN3-210ENST00000515420 FBXL15Q9H469 300 aa10.03□□□□□ -0.8
CLCN3-210ENST00000515420 SLC35D1Q9NTN3 355 aa10.03□□□□□ -0.8
CLCN3-210ENST00000515420 TUSC2O75896 110 aa10.02□□□□□ -0.81
CLCN3-210ENST00000515420 PSMB8P28062 276 aa10.02□□□□□ -0.81
CLCN3-210ENST00000515420 PPIFP30405 207 aaKnown RBP10.02□□□□□ -0.81
CLCN3-210ENST00000515420 CDX1P47902 265 aaPredicted RBP10.02□□□□□ -0.81
CLCN3-210ENST00000515420 VBP1P61758 197 aa10.02□□□□□ -0.81
CLCN3-210ENST00000515420 NCS1P62166 190 aa10.02□□□□□ -0.81
CLCN3-210ENST00000515420 RPS16P62249 146 aaKnown RBP10.02□□□□□ -0.81
CLCN3-210ENST00000515420 PSG5Q15238 335 aa10.02□□□□□ -0.81
CLCN3-210ENST00000515420 MSMO1Q15800 293 aa10.02□□□□□ -0.81
CLCN3-210ENST00000515420 RTL8BQ17RB0 113 aa10.02□□□□□ -0.81
CLCN3-210ENST00000515420 TMEM177Q53S58 311 aa10.02□□□□□ -0.81
CLCN3-210ENST00000515420 ZNF695Q8IW36 515 aa10.02□□□□□ -0.81
CLCN3-210ENST00000515420 SAMD12Q8N8I0 201 aa10.02□□□□□ -0.81
CLCN3-210ENST00000515420 MYOZ3Q8TDC0 251 aa10.02□□□□□ -0.81
CLCN3-210ENST00000515420 DDB2Q92466 427 aa10.02□□□□□ -0.81
CLCN3-210ENST00000515420 C5orf30Q96GV9 206 aa10.02□□□□□ -0.81
CLCN3-210ENST00000515420 METTL1Q9UBP6 276 aaKnown RBP10.02□□□□□ -0.81
CLCN3-210ENST00000515420 TRAV41A0A0B4J266 112 aa10.01□□□□□ -0.81
CLCN3-210ENST00000515420 DUS4LO95620 317 aaKnown RBP10.01□□□□□ -0.81
CLCN3-210ENST00000515420 IGLV1-40P01703 118 aa10.01□□□□□ -0.81
CLCN3-210ENST00000515420 CD33P20138 364 aa10.01□□□□□ -0.81
CLCN3-210ENST00000515420 DUTP33316 252 aaKnown RBP10.01□□□□□ -0.81
CLCN3-210ENST00000515420 ARPC4P59998 168 aa10.01□□□□□ -0.81
CLCN3-210ENST00000515420 CX3CL1P78423 397 aa10.01□□□□□ -0.81
CLCN3-210ENST00000515420 TMEM267Q0VDI3 215 aaPredicted RBP10.01□□□□□ -0.81
CLCN3-210ENST00000515420 CTF1Q16619 201 aa10.01□□□□□ -0.81
CLCN3-210ENST00000515420 BEAN1Q3B7T3 259 aa10.01□□□□□ -0.81
CLCN3-210ENST00000515420 C19orf54Q5BKX5 351 aa10.01□□□□□ -0.81
CLCN3-210ENST00000515420 TMEM69Q5SWH9 247 aa10.01□□□□□ -0.81
CLCN3-210ENST00000515420 ZNF562Q6V9R5 426 aa10.01□□□□□ -0.81
CLCN3-210ENST00000515420 MINDY2Q8NBR6 621 aa10.01□□□□□ -0.81
CLCN3-210ENST00000515420 KLHL30-AS1Q8NEE0 82 aa10.01□□□□□ -0.81
CLCN3-210ENST00000515420 RCC1LQ96I51 464 aaKnown RBP10.01□□□□□ -0.81
CLCN3-210ENST00000515420 PARP11Q9NR21 331 aa10.01□□□□□ -0.81
CLCN3-210ENST00000515420 NECAP2Q9NVZ3 263 aa10.01□□□□□ -0.81
CLCN3-210ENST00000515420 NUDT19A8MXV4 375 aa10□□□□□ -0.81
CLCN3-210ENST00000515420 G3V4G9 280 aa10□□□□□ -0.81
CLCN3-210ENST00000515420 IGLV2-23P01705 113 aa10□□□□□ -0.81
CLCN3-210ENST00000515420 APOA1P02647 267 aa10□□□□□ -0.81
CLCN3-210ENST00000515420 RPLP1P05386 114 aaKnown RBP10□□□□□ -0.81
CLCN3-210ENST00000515420 NFYAP23511 347 aaPredicted RBP10□□□□□ -0.81
CLCN3-210ENST00000515420 MYCNOSP40205 109 aa10□□□□□ -0.81
CLCN3-210ENST00000515420 ALDH3B2P48448 385 aa10□□□□□ -0.81
CLCN3-210ENST00000515420 RORCP51449 518 aa10□□□□□ -0.81
CLCN3-210ENST00000515420 LINC00205P59089 165 aa10□□□□□ -0.81
CLCN3-210ENST00000515420 NDPQ00604 133 aa10□□□□□ -0.81
CLCN3-210ENST00000515420 ETV3LQ6ZN32 361 aa10□□□□□ -0.81
CLCN3-210ENST00000515420 OVCH2Q7RTZ1 564 aa10□□□□□ -0.81
CLCN3-210ENST00000515420 PPP1R27Q86WC6 154 aa10□□□□□ -0.81
CLCN3-210ENST00000515420 GVQW1Q8N7I0 195 aa10□□□□□ -0.81
CLCN3-210ENST00000515420 OR5AP2Q8NGF4 316 aa10□□□□□ -0.81
CLCN3-210ENST00000515420 OSR1Q8TAX0 266 aaPredicted RBP10□□□□□ -0.81
CLCN3-210ENST00000515420 HARBI1Q96MB7 349 aa10□□□□□ -0.81
CLCN3-210ENST00000515420 ANAPC10Q9UM13 185 aa10□□□□□ -0.81
CLCN3-210ENST00000515420 RBMX2Q9Y388 322 aaKnown RBP10□□□□□ -0.81
CLCN3-210ENST00000515420 PRELID3BQ9Y3B1 194 aa10□□□□□ -0.81
CLCN3-210ENST00000515420 NUBP2Q9Y5Y2 271 aa10□□□□□ -0.81
CLCN3-210ENST00000515420 IGKV1D-13A0A0B4J2D9 117 aa9.99□□□□□ -0.81
CLCN3-210ENST00000515420 LINC00473A8K010 186 aa9.99□□□□□ -0.81
CLCN3-210ENST00000515420 G3V318 75 aa9.99□□□□□ -0.81
CLCN3-210ENST00000515420 FCN1O00602 326 aa9.99□□□□□ -0.81
CLCN3-210ENST00000515420 SLC25A17O43808 307 aa9.99□□□□□ -0.81
CLCN3-210ENST00000515420 IGKV1-13P0DP09 117 aa9.99□□□□□ -0.81
CLCN3-210ENST00000515420 TAS2R20P59543 309 aa9.99□□□□□ -0.81
CLCN3-210ENST00000515420 PDLIM3Q53GG5 364 aaPredicted RBP9.99□□□□□ -0.81
CLCN3-210ENST00000515420 AKIRIN2Q53H80 203 aa9.99□□□□□ -0.81
CLCN3-210ENST00000515420 PYHIN1Q6K0P9 492 aa9.99□□□□□ -0.81
CLCN3-210ENST00000515420 TMEM65Q6PI78 240 aa9.99□□□□□ -0.81
CLCN3-210ENST00000515420 C8orf86Q6ZUL3 223 aa9.99□□□□□ -0.81
CLCN3-210ENST00000515420 GPR141Q7Z602 305 aa9.99□□□□□ -0.81
CLCN3-210ENST00000515420 LINC00482Q8N8I6 264 aa9.99□□□□□ -0.81
CLCN3-210ENST00000515420 BVESQ8NE79 360 aa9.99□□□□□ -0.81
CLCN3-210ENST00000515420 C4orf3Q8WVX3 66 aa9.99□□□□□ -0.81
CLCN3-210ENST00000515420 AP3S1Q92572 193 aa9.99□□□□□ -0.81
CLCN3-210ENST00000515420 SNAPC3Q92966 411 aa9.99□□□□□ -0.81
CLCN3-210ENST00000515420 UBE2E2Q96LR5 201 aa9.99□□□□□ -0.81
CLCN3-210ENST00000515420 P2RX4Q99571 388 aa9.99□□□□□ -0.81
CLCN3-210ENST00000515420 HSD17B10Q99714 261 aaKnown RBP9.99□□□□□ -0.81
CLCN3-210ENST00000515420 GPR61Q9BZJ8 451 aa9.99□□□□□ -0.81
CLCN3-210ENST00000515420 IFT46Q9NQC8 304 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms