RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 FBXL15Q9H469 300 aa5.55□□□□□ -1.52
USP46-208ENST00000512656 SLA2Q9H6Q3 261 aa5.55□□□□□ -1.52
USP46-208ENST00000512656 ZMAT4Q9H898 229 aa5.55□□□□□ -1.52
USP46-208ENST00000512656 WASHC3Q9Y3C0 194 aa5.55□□□□□ -1.52
USP46-208ENST00000512656 A3GALT2U3KPV4 340 aa5.55□□□□□ -1.52
USP46-208ENST00000512656 TRBV6-6A0A0A6YYG2 114 aa5.54□□□□□ -1.52
USP46-208ENST00000512656 H0YJW9 148 aa5.54□□□□□ -1.52
USP46-208ENST00000512656 SLC22A1O15245 554 aa5.54□□□□□ -1.52
USP46-208ENST00000512656 SPDEFO95238 335 aa5.54□□□□□ -1.52
USP46-208ENST00000512656 APOA2P02652 100 aa5.54□□□□□ -1.52
USP46-208ENST00000512656 HSPB1P04792 205 aaKnown RBP5.54□□□□□ -1.52
USP46-208ENST00000512656 TFAP2AP05549 437 aa5.54□□□□□ -1.52
USP46-208ENST00000512656 CT45A6P0DMU7 189 aa5.54□□□□□ -1.52
USP46-208ENST00000512656 CT45A5P0DMU8 189 aa5.54□□□□□ -1.52
USP46-208ENST00000512656 CT45A7P0DMV0 189 aa5.54□□□□□ -1.52
USP46-208ENST00000512656 CPEP16870 476 aa5.54□□□□□ -1.52
USP46-208ENST00000512656 SRMP19623 302 aa5.54□□□□□ -1.52
USP46-208ENST00000512656 NDPQ00604 133 aa5.54□□□□□ -1.52
USP46-208ENST00000512656 HSD17B12Q53GQ0 312 aa5.54□□□□□ -1.52
USP46-208ENST00000512656 RPL39P5Q59GN2 51 aa5.54□□□□□ -1.52
USP46-208ENST00000512656 C19orf54Q5BKX5 351 aa5.54□□□□□ -1.52
USP46-208ENST00000512656 RNLSQ5VYX0 342 aa5.54□□□□□ -1.52
USP46-208ENST00000512656 ACSM6Q6P461 480 aa5.54□□□□□ -1.52
USP46-208ENST00000512656 UNQ5815/PRO19632Q6UWF5 114 aa5.54□□□□□ -1.52
USP46-208ENST00000512656 ZNF562Q6V9R5 426 aa5.54□□□□□ -1.52
USP46-208ENST00000512656 OR6M1Q8NGM8 313 aa5.54□□□□□ -1.52
USP46-208ENST00000512656 ARPC1AQ92747 370 aa5.54□□□□□ -1.52
USP46-208ENST00000512656 DLX4Q92988 240 aaPredicted RBP5.54□□□□□ -1.52
USP46-208ENST00000512656 RBMXL1Q96E39 390 aaKnown RBP5.54□□□□□ -1.52
USP46-208ENST00000512656 RCHY1Q96PM5 261 aa5.54□□□□□ -1.52
USP46-208ENST00000512656 TMED9Q9BVK6 235 aa5.54□□□□□ -1.52
USP46-208ENST00000512656 TM2D1Q9BX74 207 aa5.54□□□□□ -1.52
USP46-208ENST00000512656 METTL1Q9UBP6 276 aaKnown RBP5.54□□□□□ -1.52
USP46-208ENST00000512656 ZNF221Q9UK13 617 aa5.54□□□□□ -1.52
USP46-208ENST00000512656 NUBP2Q9Y5Y2 271 aa5.54□□□□□ -1.52
USP46-208ENST00000512656 DYNC2H1Q8NCM8 4307 aaKnown RBP5.54□□□□□ -1.52
USP46-208ENST00000512656 IGHV4OR15-8A0A075B7B6 117 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 A0A087WW49 117 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 A0A0G2JLM5 398 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 C13orf42A0A1B0GVH6 325 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 KRTAP23-1A1A580 65 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 TMEM14DPA8MWL7 114 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 FCN1O00602 326 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 SOX15O60248 233 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 GNAO1P09471 354 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 FRMD6-AS1P0C7T7 363 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 LYL1P12980 280 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 GP9P14770 177 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 ARSBP15848 533 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 SPNP16150 400 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 ZP3P21754 424 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 CEACAM6P40199 344 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 SERPINB10P48595 397 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 TPPP2P59282 170 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 RPS16P62249 146 aaKnown RBP5.53□□□□□ -1.52
USP46-208ENST00000512656 HLA-DRB3P79483 266 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 MRPS15P82914 257 aaKnown RBP5.53□□□□□ -1.52
USP46-208ENST00000512656 CBX3Q13185 183 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 RCN1Q15293 331 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 SPHARQ15513 63 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 MOGAT2Q3SYC2 334 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 OR10K2Q6IF99 312 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 CEACAM19Q7Z692 300 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 C5orf24Q7Z6I8 188 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 LRRTM1Q86UE6 522 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 ANKRD13BQ86YJ7 626 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 PDPNQ86YL7 162 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 SBSPONQ8IVN8 264 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.53□□□□□ -1.52
USP46-208ENST00000512656 LFNGQ8NES3 379 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 OR5AN1Q8NGI8 311 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 PTX4Q96A99 478 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 ABHD14BQ96IU4 210 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 TMEM68Q96MH6 324 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 CLCC1Q96S66 551 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 AGMATQ9BSE5 352 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 NICN1Q9BSH3 213 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 C11orf54Q9H0W9 315 aaPredicted RBP5.53□□□□□ -1.52
USP46-208ENST00000512656 ALX4Q9H161 411 aaPredicted RBP5.53□□□□□ -1.52
USP46-208ENST00000512656 PLGRKTQ9HBL7 147 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 RANGRFQ9HD47 186 aaPredicted RBP5.53□□□□□ -1.52
USP46-208ENST00000512656 PALMDQ9NP74 551 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 C12orf4Q9NQ89 552 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 ZNF355PQ9NSJ1 428 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 FKBP14Q9NWM8 211 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 SCN3BQ9NY72 215 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 HSF4Q9ULV5 492 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 STUB1Q9UNE7 303 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 FBXO7Q9Y3I1 522 aa5.53□□□□□ -1.52
USP46-208ENST00000512656 PTGES3LE9PB15 166 aa5.52□□□□□ -1.53
USP46-208ENST00000512656 H3BUA1 57 aa5.52□□□□□ -1.53
USP46-208ENST00000512656 SLC17A2O00624 439 aa5.52□□□□□ -1.53
USP46-208ENST00000512656 LDLRAD4O15165 306 aa5.52□□□□□ -1.53
USP46-208ENST00000512656 ARL6IP5O75915 188 aa5.52□□□□□ -1.53
USP46-208ENST00000512656 CNIH1O95406 144 aa5.52□□□□□ -1.53
USP46-208ENST00000512656 CA2P00918 260 aa5.52□□□□□ -1.53
USP46-208ENST00000512656 IGHV3-11P01762 117 aa5.52□□□□□ -1.53
USP46-208ENST00000512656 TRGV3P03979 118 aa5.52□□□□□ -1.53
USP46-208ENST00000512656 CDK1P06493 297 aa5.52□□□□□ -1.53
USP46-208ENST00000512656 UCHL1P09936 223 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 172.8 ms