RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 TM2D1Q9BX74 207 aa12.33□□□□□ -0.44
SNF8-205ENST00000507302 RPS27AP62979 156 aaKnown RBP12.32□□□□□ -0.44
SNF8-205ENST00000507302 EWSR1Q01844 656 aaKnown RBP eCLIP12.32□□□□□ -0.44
SNF8-205ENST00000507302 TNFRSF9Q07011 255 aa12.32□□□□□ -0.44
SNF8-205ENST00000507302 CEMP1Q6PRD7 247 aaPredicted RBP12.32□□□□□ -0.44
SNF8-205ENST00000507302 CBR4Q8N4T8 237 aa12.32□□□□□ -0.44
SNF8-205ENST00000507302 RPP25LQ8N5L8 163 aaKnown RBP12.32□□□□□ -0.44
SNF8-205ENST00000507302 NEDD4LQ96PU5 975 aa12.32□□□□□ -0.44
SNF8-205ENST00000507302 TECRQ9NZ01 308 aaKnown RBP12.32□□□□□ -0.44
SNF8-205ENST00000507302 OR1A1Q9P1Q5 309 aa12.32□□□□□ -0.44
SNF8-205ENST00000507302 ZNF230Q9UIE0 474 aaPredicted RBP12.32□□□□□ -0.44
SNF8-205ENST00000507302 DIMT1Q9UNQ2 313 aaKnown RBP12.32□□□□□ -0.44
SNF8-205ENST00000507302 VPS13DQ5THJ4 4388 aa12.32□□□□□ -0.44
SNF8-205ENST00000507302 KIAA1109Q2LD37 5005 aa12.31□□□□□ -0.44
SNF8-205ENST00000507302 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.31□□□□□ -0.44
SNF8-205ENST00000507302 LOC100130705A0A1B0GUX0 176 aa12.31□□□□□ -0.44
SNF8-205ENST00000507302 CD1AP06126 327 aa12.31□□□□□ -0.44
SNF8-205ENST00000507302 UBBP0CG47 229 aa12.31□□□□□ -0.44
SNF8-205ENST00000507302 CD37P11049 281 aa12.31□□□□□ -0.44
SNF8-205ENST00000507302 ZBTB25P24278 435 aa12.31□□□□□ -0.44
SNF8-205ENST00000507302 HTR2CP28335 458 aa12.31□□□□□ -0.44
SNF8-205ENST00000507302 CEACAM6P40199 344 aa12.31□□□□□ -0.44
SNF8-205ENST00000507302 SMN1Q16637 294 aaKnown RBP12.31□□□□□ -0.44
SNF8-205ENST00000507302 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.31□□□□□ -0.44
SNF8-205ENST00000507302 RIMS4Q9H426 269 aaPredicted RBP12.31□□□□□ -0.44
SNF8-205ENST00000507302 CLEC2DQ9UHP7 191 aa12.31□□□□□ -0.44
SNF8-205ENST00000507302 A0A0B4J203 849 aa12.3□□□□□ -0.44
SNF8-205ENST00000507302 A0A1W2PPK0 400 aa12.3□□□□□ -0.44
SNF8-205ENST00000507302 C2orf70A6NJV1 201 aa12.3□□□□□ -0.44
SNF8-205ENST00000507302 FAM223BA6NKX1 122 aa12.3□□□□□ -0.44
SNF8-205ENST00000507302 LGALS9O00182 355 aa12.3□□□□□ -0.44
SNF8-205ENST00000507302 APOA2P02652 100 aa12.3□□□□□ -0.44
SNF8-205ENST00000507302 QRFPP83859 136 aa12.3□□□□□ -0.44
SNF8-205ENST00000507302 ZNF45Q02386 682 aa12.3□□□□□ -0.44
SNF8-205ENST00000507302 TMEM177Q53S58 311 aa12.3□□□□□ -0.44
SNF8-205ENST00000507302 FAM223AQ8IWN6 122 aa12.3□□□□□ -0.44
SNF8-205ENST00000507302 PYDC1Q8WXC3 89 aa12.3□□□□□ -0.44
SNF8-205ENST00000507302 KCTD12Q96CX2 325 aaKnown RBP12.3□□□□□ -0.44
SNF8-205ENST00000507302 AKIP1Q9NQ31 210 aa12.3□□□□□ -0.44
SNF8-205ENST00000507302 COA4Q9NYJ1 87 aa12.3□□□□□ -0.44
SNF8-205ENST00000507302 EXOSC1Q9Y3B2 195 aaKnown RBP12.3□□□□□ -0.44
SNF8-205ENST00000507302 RYR1P21817 5038 aa12.29□□□□□ -0.44
SNF8-205ENST00000507302 SRRM4A7MD48 611 aaKnown RBP12.29□□□□□ -0.44
SNF8-205ENST00000507302 OR9G9P0C7N8 305 aa12.29□□□□□ -0.44
SNF8-205ENST00000507302 FOLR2P14207 255 aa12.29□□□□□ -0.44
SNF8-205ENST00000507302 HLA-DRB3P79483 266 aa12.29□□□□□ -0.44
SNF8-205ENST00000507302 UNC119Q13432 240 aa12.29□□□□□ -0.44
SNF8-205ENST00000507302 C1orf100Q5SVJ3 147 aa12.29□□□□□ -0.44
SNF8-205ENST00000507302 KCNG3Q8TAE7 436 aa12.29□□□□□ -0.44
SNF8-205ENST00000507302 WDR89Q96FK6 387 aaPredicted RBP12.29□□□□□ -0.44
SNF8-205ENST00000507302 GGTLC1Q9BX51 225 aa12.29□□□□□ -0.44
SNF8-205ENST00000507302 SLC35D1Q9NTN3 355 aa12.29□□□□□ -0.44
SNF8-205ENST00000507302 MGAT4AQ9UM21 535 aa12.29□□□□□ -0.44
SNF8-205ENST00000507302 TP53TG1Q9Y2A0 90 aa12.29□□□□□ -0.44
SNF8-205ENST00000507302 DNAH6Q9C0G6 4158 aa12.29□□□□□ -0.44
SNF8-205ENST00000507302 A0A0A6YYD4 124 aa12.28□□□□□ -0.44
SNF8-205ENST00000507302 IGKV1-6A0A0C4DH72 117 aa12.28□□□□□ -0.44
SNF8-205ENST00000507302 IRGMA1A4Y4 181 aa12.28□□□□□ -0.44
SNF8-205ENST00000507302 CXorf65A6NEN9 183 aa12.28□□□□□ -0.44
SNF8-205ENST00000507302 MSGN1A6NI15 193 aa12.28□□□□□ -0.44
SNF8-205ENST00000507302 EDN2P20800 178 aa12.28□□□□□ -0.44
SNF8-205ENST00000507302 RASSF2P50749 326 aa12.28□□□□□ -0.44
SNF8-205ENST00000507302 EXOSC2Q13868 293 aaKnown RBP12.28□□□□□ -0.44
SNF8-205ENST00000507302 FAM209BQ5JX69 171 aa12.28□□□□□ -0.44
SNF8-205ENST00000507302 LGALS9CQ6DKI2 356 aa12.28□□□□□ -0.44
SNF8-205ENST00000507302 OR10K2Q6IF99 312 aa12.28□□□□□ -0.44
SNF8-205ENST00000507302 ZFP41Q8N8Y5 198 aa12.28□□□□□ -0.44
SNF8-205ENST00000507302 NICN1Q9BSH3 213 aa12.28□□□□□ -0.44
SNF8-205ENST00000507302 ZNF221Q9UK13 617 aa12.28□□□□□ -0.44
SNF8-205ENST00000507302 FOXI3A8MTJ6 420 aaPredicted RBP12.27□□□□□ -0.45
SNF8-205ENST00000507302 TMEM14DPA8MWL7 114 aa12.27□□□□□ -0.45
SNF8-205ENST00000507302 DYNC1I1O14576 645 aa12.27□□□□□ -0.45
SNF8-205ENST00000507302 NDUFB8O95169 186 aa12.27□□□□□ -0.45
SNF8-205ENST00000507302 SCTP09683 121 aa12.27□□□□□ -0.45
SNF8-205ENST00000507302 RHOGP84095 191 aa12.27□□□□□ -0.45
SNF8-205ENST00000507302 TAGLNQ01995 201 aaKnown RBP12.27□□□□□ -0.45
SNF8-205ENST00000507302 PMS2P11Q13670 270 aa12.27□□□□□ -0.45
SNF8-205ENST00000507302 SLC16A13Q7RTY0 426 aa12.27□□□□□ -0.45
SNF8-205ENST00000507302 FAM89BQ8N5H3 189 aa12.27□□□□□ -0.45
SNF8-205ENST00000507302 TEX45Q8NA69 505 aa12.27□□□□□ -0.45
SNF8-205ENST00000507302 DYNLRB2Q8TF09 96 aa12.27□□□□□ -0.45
SNF8-205ENST00000507302 THRSPQ92748 146 aa12.27□□□□□ -0.45
SNF8-205ENST00000507302 TMEM59Q9BXS4 323 aa12.27□□□□□ -0.45
SNF8-205ENST00000507302 Q9N2K0 584 aa12.27□□□□□ -0.45
SNF8-205ENST00000507302 LOC102724200A0A096LPH7 203 aaPredicted RBP12.26□□□□□ -0.45
SNF8-205ENST00000507302 A0A0J9YWU9 116 aa12.26□□□□□ -0.45
SNF8-205ENST00000507302 MYL12AP19105 171 aa12.26□□□□□ -0.45
SNF8-205ENST00000507302 TAS2R43P59537 309 aa12.26□□□□□ -0.45
SNF8-205ENST00000507302 ATP5G2Q06055 141 aa12.26□□□□□ -0.45
SNF8-205ENST00000507302 PRSS8Q16651 343 aa12.26□□□□□ -0.45
SNF8-205ENST00000507302 GUCA2BQ16661 112 aa12.26□□□□□ -0.45
SNF8-205ENST00000507302 Q6ZWC4 215 aa12.26□□□□□ -0.45
SNF8-205ENST00000507302 GPHB5Q86YW7 130 aa12.26□□□□□ -0.45
SNF8-205ENST00000507302 NECAP1Q8NC96 275 aa12.26□□□□□ -0.45
SNF8-205ENST00000507302 HARBI1Q96MB7 349 aa12.26□□□□□ -0.45
SNF8-205ENST00000507302 HDHD3Q9BSH5 251 aaPredicted RBP12.26□□□□□ -0.45
SNF8-205ENST00000507302 AK3Q9UIJ7 227 aa12.26□□□□□ -0.45
SNF8-205ENST00000507302 HSF4Q9ULV5 492 aa12.26□□□□□ -0.45
SNF8-205ENST00000507302 A8MWP6 167 aa12.25□□□□□ -0.45
SNF8-205ENST00000507302 M0R1X1 148 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms