RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 LCE6AA0A183 80 aa12.94□□□□□ -0.34
TRAPPC3-207ENST00000497251 ARSBP15848 533 aa12.94□□□□□ -0.34
TRAPPC3-207ENST00000497251 CEACAM6P40199 344 aa12.94□□□□□ -0.34
TRAPPC3-207ENST00000497251 LGALS7P47929 136 aa12.94□□□□□ -0.34
TRAPPC3-207ENST00000497251 VEGFCP49767 419 aa12.94□□□□□ -0.34
TRAPPC3-207ENST00000497251 TAGLNQ01995 201 aaKnown RBP12.94□□□□□ -0.34
TRAPPC3-207ENST00000497251 PSG5Q15238 335 aa12.94□□□□□ -0.34
TRAPPC3-207ENST00000497251 RPL39P5Q59GN2 51 aa12.94□□□□□ -0.34
TRAPPC3-207ENST00000497251 UBE2UQ5VVX9 321 aa12.94□□□□□ -0.34
TRAPPC3-207ENST00000497251 OR10K2Q6IF99 312 aa12.94□□□□□ -0.34
TRAPPC3-207ENST00000497251 FCGR1BQ92637 280 aa12.94□□□□□ -0.34
TRAPPC3-207ENST00000497251 RBMXL1Q96E39 390 aaKnown RBP12.94□□□□□ -0.34
TRAPPC3-207ENST00000497251 C11orf54Q9H0W9 315 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC3-207ENST00000497251 ZNF221Q9UK13 617 aa12.94□□□□□ -0.34
TRAPPC3-207ENST00000497251 RRP15Q9Y3B9 282 aaKnown RBP12.94□□□□□ -0.34
TRAPPC3-207ENST00000497251 AK6Q9Y3D8 172 aaKnown RBP12.94□□□□□ -0.34
TRAPPC3-207ENST00000497251 A3GALT2U3KPV4 340 aa12.94□□□□□ -0.34
TRAPPC3-207ENST00000497251 TRAV1-2A0A0B4J238 106 aa12.93□□□□□ -0.34
TRAPPC3-207ENST00000497251 C13orf42A0A1B0GVH6 325 aa12.93□□□□□ -0.34
TRAPPC3-207ENST00000497251 TRIM64CA6NLI5 447 aa12.93□□□□□ -0.34
TRAPPC3-207ENST00000497251 APOA2P02652 100 aa12.93□□□□□ -0.34
TRAPPC3-207ENST00000497251 TRGV3P03979 118 aa12.93□□□□□ -0.34
TRAPPC3-207ENST00000497251 IGHV4-30-4P0DP06 118 aa12.93□□□□□ -0.34
TRAPPC3-207ENST00000497251 AADACP22760 399 aa12.93□□□□□ -0.34
TRAPPC3-207ENST00000497251 SERPINB10P48595 397 aa12.93□□□□□ -0.34
TRAPPC3-207ENST00000497251 RAB11BQ15907 218 aa12.93□□□□□ -0.34
TRAPPC3-207ENST00000497251 TATDN3Q17R31 274 aa12.93□□□□□ -0.34
TRAPPC3-207ENST00000497251 SPARTQ8N0X7 666 aa12.93□□□□□ -0.34
TRAPPC3-207ENST00000497251 Q8N1Y9 231 aa12.93□□□□□ -0.34
TRAPPC3-207ENST00000497251 FAM89BQ8N5H3 189 aa12.93□□□□□ -0.34
TRAPPC3-207ENST00000497251 POC5Q8NA72 575 aa12.93□□□□□ -0.34
TRAPPC3-207ENST00000497251 SIGLEC8Q9NYZ4 499 aa12.93□□□□□ -0.34
TRAPPC3-207ENST00000497251 GAB2Q9UQC2 676 aa12.93□□□□□ -0.34
TRAPPC3-207ENST00000497251 V9GY05 133 aa12.93□□□□□ -0.34
TRAPPC3-207ENST00000497251 DYNC2H1Q8NCM8 4307 aaKnown RBP12.92□□□□□ -0.34
TRAPPC3-207ENST00000497251 TRDV1A0A1B0GX56 115 aa12.92□□□□□ -0.34
TRAPPC3-207ENST00000497251 PDCD5O14737 125 aa12.92□□□□□ -0.34
TRAPPC3-207ENST00000497251 DIRAS3O95661 229 aa12.92□□□□□ -0.34
TRAPPC3-207ENST00000497251 CA2P00918 260 aa12.92□□□□□ -0.34
TRAPPC3-207ENST00000497251 IGHV3-11P01762 117 aa12.92□□□□□ -0.34
TRAPPC3-207ENST00000497251 RPS16P62249 146 aaKnown RBP12.92□□□□□ -0.34
TRAPPC3-207ENST00000497251 KLF5Q13887 457 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC3-207ENST00000497251 FXYD3Q14802 87 aa12.92□□□□□ -0.34
TRAPPC3-207ENST00000497251 ABHD14BQ96IU4 210 aa12.92□□□□□ -0.34
TRAPPC3-207ENST00000497251 MS4A10Q96PG2 267 aa12.92□□□□□ -0.34
TRAPPC3-207ENST00000497251 SPATA25Q9BR10 227 aa12.92□□□□□ -0.34
TRAPPC3-207ENST00000497251 CENPOQ9BU64 300 aa12.92□□□□□ -0.34
TRAPPC3-207ENST00000497251 LPAR5Q9H1C0 372 aa12.92□□□□□ -0.34
TRAPPC3-207ENST00000497251 C12orf4Q9NQ89 552 aa12.92□□□□□ -0.34
TRAPPC3-207ENST00000497251 IFNA6P05013 189 aa12.91□□□□□ -0.34
TRAPPC3-207ENST00000497251 MYL9P24844 172 aa12.91□□□□□ -0.34
TRAPPC3-207ENST00000497251 HLA-DRB3P79483 266 aa12.91□□□□□ -0.34
TRAPPC3-207ENST00000497251 P2RY14Q15391 338 aa12.91□□□□□ -0.34
TRAPPC3-207ENST00000497251 SRSF7Q16629 238 aaKnown RBP eCLIP12.91□□□□□ -0.34
TRAPPC3-207ENST00000497251 GLDNQ6ZMI3 551 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC3-207ENST00000497251 C5orf24Q7Z6I8 188 aa12.91□□□□□ -0.34
TRAPPC3-207ENST00000497251 SETD6Q8TBK2 473 aa12.91□□□□□ -0.34
TRAPPC3-207ENST00000497251 USMG5Q96IX5 58 aa12.91□□□□□ -0.34
TRAPPC3-207ENST00000497251 NICN1Q9BSH3 213 aa12.91□□□□□ -0.34
TRAPPC3-207ENST00000497251 KCNK15Q9H427 330 aa12.91□□□□□ -0.34
TRAPPC3-207ENST00000497251 EDA2RQ9HAV5 297 aa12.91□□□□□ -0.34
TRAPPC3-207ENST00000497251 Q9N2K0 584 aa12.91□□□□□ -0.34
TRAPPC3-207ENST00000497251 A0A0A6YYD4 124 aa12.9□□□□□ -0.34
TRAPPC3-207ENST00000497251 CNIH1O95406 144 aa12.9□□□□□ -0.34
TRAPPC3-207ENST00000497251 IGKV1-16P04430 117 aa12.9□□□□□ -0.34
TRAPPC3-207ENST00000497251 CBX3Q13185 183 aa12.9□□□□□ -0.34
TRAPPC3-207ENST00000497251 ZNF773Q6PK81 442 aa12.9□□□□□ -0.34
TRAPPC3-207ENST00000497251 OR9G4Q8NGQ1 327 aa12.9□□□□□ -0.34
TRAPPC3-207ENST00000497251 IL17DQ8TAD2 202 aa12.9□□□□□ -0.34
TRAPPC3-207ENST00000497251 CASTOR1Q8WTX7 329 aa12.9□□□□□ -0.34
TRAPPC3-207ENST00000497251 FAM3DQ96BQ1 224 aa12.9□□□□□ -0.34
TRAPPC3-207ENST00000497251 FAM103A1Q9BTL3 118 aaKnown RBP12.9□□□□□ -0.34
TRAPPC3-207ENST00000497251 ZNF355PQ9NSJ1 428 aa12.9□□□□□ -0.34
TRAPPC3-207ENST00000497251 FOXI3A8MTJ6 420 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC3-207ENST00000497251 PROP1O75360 226 aa12.89□□□□□ -0.35
TRAPPC3-207ENST00000497251 PSMB9P28065 219 aa12.89□□□□□ -0.35
TRAPPC3-207ENST00000497251 FGF9P31371 208 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC3-207ENST00000497251 FAM209BQ5JX69 171 aa12.89□□□□□ -0.35
TRAPPC3-207ENST00000497251 LCN12Q6JVE5 192 aa12.89□□□□□ -0.35
TRAPPC3-207ENST00000497251 GTSCR1Q86UQ5 136 aa12.89□□□□□ -0.35
TRAPPC3-207ENST00000497251 ZNF383Q8NA42 475 aa12.89□□□□□ -0.35
TRAPPC3-207ENST00000497251 OR2K2Q8NGT1 345 aa12.89□□□□□ -0.35
TRAPPC3-207ENST00000497251 CLCC1Q96S66 551 aa12.89□□□□□ -0.35
TRAPPC3-207ENST00000497251 RSRP1Q9BUV0 290 aa12.89□□□□□ -0.35
TRAPPC3-207ENST00000497251 AK3Q9UIJ7 227 aa12.89□□□□□ -0.35
TRAPPC3-207ENST00000497251 TRDCB7Z8K6 153 aa12.88□□□□□ -0.35
TRAPPC3-207ENST00000497251 SLC25A17O43808 307 aa12.88□□□□□ -0.35
TRAPPC3-207ENST00000497251 AIREO43918 545 aa12.88□□□□□ -0.35
TRAPPC3-207ENST00000497251 RRASP10301 218 aa12.88□□□□□ -0.35
TRAPPC3-207ENST00000497251 RAB3BP20337 219 aa12.88□□□□□ -0.35
TRAPPC3-207ENST00000497251 CLDN12P56749 244 aa12.88□□□□□ -0.35
TRAPPC3-207ENST00000497251 C2orf76Q3KRA6 126 aa12.88□□□□□ -0.35
TRAPPC3-207ENST00000497251 KCTD21Q4G0X4 260 aa12.88□□□□□ -0.35
TRAPPC3-207ENST00000497251 ZNF343Q6P1L6 599 aa12.88□□□□□ -0.35
TRAPPC3-207ENST00000497251 Q8N402 240 aa12.88□□□□□ -0.35
TRAPPC3-207ENST00000497251 OR56B1Q8NGI3 324 aa12.88□□□□□ -0.35
TRAPPC3-207ENST00000497251 OR4A4PQ8NGN8 299 aa12.88□□□□□ -0.35
TRAPPC3-207ENST00000497251 GRPEL2Q8TAA5 225 aa12.88□□□□□ -0.35
TRAPPC3-207ENST00000497251 CYYR1Q96J86 154 aa12.88□□□□□ -0.35
TRAPPC3-207ENST00000497251 CMSS1Q9BQ75 279 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms