RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 FBXO7Q9Y3I1 522 aa8.32□□□□□ -1.08
COL6A3-214ENST00000493608 IGKV1D-8A0A087WSZ0 117 aa8.31□□□□□ -1.08
COL6A3-214ENST00000493608 TRAV41A0A0B4J266 112 aa8.31□□□□□ -1.08
COL6A3-214ENST00000493608 METTL21EPA6NDL7 271 aa8.31□□□□□ -1.08
COL6A3-214ENST00000493608 OR5H14A6NHG9 310 aa8.31□□□□□ -1.08
COL6A3-214ENST00000493608 J3QRK9 145 aa8.31□□□□□ -1.08
COL6A3-214ENST00000493608 K7EIL1 84 aa8.31□□□□□ -1.08
COL6A3-214ENST00000493608 M0R1X1 148 aa8.31□□□□□ -1.08
COL6A3-214ENST00000493608 MFNGO00587 321 aa8.31□□□□□ -1.08
COL6A3-214ENST00000493608 RRHO14718 337 aa8.31□□□□□ -1.08
COL6A3-214ENST00000493608 DUS4LO95620 317 aaKnown RBP8.31□□□□□ -1.08
COL6A3-214ENST00000493608 IGKV1-16P04430 117 aa8.31□□□□□ -1.08
COL6A3-214ENST00000493608 CLEC2LP0C7M8 214 aa8.31□□□□□ -1.08
COL6A3-214ENST00000493608 HIST1H1DP16402 221 aaKnown RBP8.31□□□□□ -1.08
COL6A3-214ENST00000493608 GALP22466 123 aa8.31□□□□□ -1.08
COL6A3-214ENST00000493608 PSMB8P28062 276 aa8.31□□□□□ -1.08
COL6A3-214ENST00000493608 PPIFP30405 207 aaKnown RBP8.31□□□□□ -1.08
COL6A3-214ENST00000493608 FGF9P31371 208 aaPredicted RBP8.31□□□□□ -1.08
COL6A3-214ENST00000493608 MC5RP33032 325 aa8.31□□□□□ -1.08
COL6A3-214ENST00000493608 SDC2P34741 201 aa8.31□□□□□ -1.08
COL6A3-214ENST00000493608 TALDO1P37837 337 aa8.31□□□□□ -1.08
COL6A3-214ENST00000493608 CX3CL1P78423 397 aa8.31□□□□□ -1.08
COL6A3-214ENST00000493608 MXD1Q05195 221 aa8.31□□□□□ -1.08
COL6A3-214ENST00000493608 KIAA0141Q14154 515 aaPredicted RBP8.31□□□□□ -1.08
COL6A3-214ENST00000493608 KIR2DS1Q14954 304 aa8.31□□□□□ -1.08
COL6A3-214ENST00000493608 NEDD8Q15843 81 aa8.31□□□□□ -1.08
COL6A3-214ENST00000493608 ECSCRQ19T08 205 aa8.31□□□□□ -1.08
COL6A3-214ENST00000493608 CDNFQ49AH0 187 aa8.31□□□□□ -1.08
COL6A3-214ENST00000493608 TMEM65Q6PI78 240 aa8.31□□□□□ -1.08
COL6A3-214ENST00000493608 ZNF773Q6PK81 442 aa8.31□□□□□ -1.08
COL6A3-214ENST00000493608 RNF152Q8N8N0 203 aa8.31□□□□□ -1.08
COL6A3-214ENST00000493608 OR5AN1Q8NGI8 311 aa8.31□□□□□ -1.08
COL6A3-214ENST00000493608 OR4A4PQ8NGN8 299 aa8.31□□□□□ -1.08
COL6A3-214ENST00000493608 OR10J5Q8NHC4 309 aa8.31□□□□□ -1.08
COL6A3-214ENST00000493608 ABHD5Q8WTS1 349 aa8.31□□□□□ -1.08
COL6A3-214ENST00000493608 FCGR1BQ92637 280 aa8.31□□□□□ -1.08
COL6A3-214ENST00000493608 CHCHD6Q9BRQ6 235 aa8.31□□□□□ -1.08
COL6A3-214ENST00000493608 FAM103A1Q9BTL3 118 aaKnown RBP8.31□□□□□ -1.08
COL6A3-214ENST00000493608 GHITMQ9H3K2 345 aa8.31□□□□□ -1.08
COL6A3-214ENST00000493608 GNB4Q9HAV0 340 aa8.31□□□□□ -1.08
COL6A3-214ENST00000493608 RRP15Q9Y3B9 282 aaKnown RBP8.31□□□□□ -1.08
COL6A3-214ENST00000493608 WASHC3Q9Y3C0 194 aa8.31□□□□□ -1.08
COL6A3-214ENST00000493608 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.31□□□□□ -1.08
COL6A3-214ENST00000493608 LOC100506127A0A0U1RQW1 187 aa8.3□□□□□ -1.08
COL6A3-214ENST00000493608 NOTOA8MTQ0 251 aa8.3□□□□□ -1.08
COL6A3-214ENST00000493608 TFAP2AP05549 437 aa8.3□□□□□ -1.08
COL6A3-214ENST00000493608 OR5H8P0DN80 308 aa8.3□□□□□ -1.08
COL6A3-214ENST00000493608 EGR2P11161 476 aaPredicted RBP8.3□□□□□ -1.08
COL6A3-214ENST00000493608 SLC6A1P30531 599 aa8.3□□□□□ -1.08
COL6A3-214ENST00000493608 PSG5Q15238 335 aa8.3□□□□□ -1.08
COL6A3-214ENST00000493608 ZNF491Q8N8L2 437 aa8.3□□□□□ -1.08
COL6A3-214ENST00000493608 ST6GALNAC5Q9BVH7 336 aa8.3□□□□□ -1.08
COL6A3-214ENST00000493608 OR2D2Q9H210 308 aa8.3□□□□□ -1.08
COL6A3-214ENST00000493608 SLC35D1Q9NTN3 355 aa8.3□□□□□ -1.08
COL6A3-214ENST00000493608 SDHAF2Q9NX18 166 aa8.3□□□□□ -1.08
COL6A3-214ENST00000493608 METTL1Q9UBP6 276 aaKnown RBP8.3□□□□□ -1.08
COL6A3-214ENST00000493608 RBM7Q9Y580 266 aaKnown RBP8.3□□□□□ -1.08
COL6A3-214ENST00000493608 TRBV6-7A0A0A0MS04 114 aa8.29□□□□□ -1.08
COL6A3-214ENST00000493608 A0A1W2PN81 502 aa8.29□□□□□ -1.08
COL6A3-214ENST00000493608 SOX15O60248 233 aa8.29□□□□□ -1.08
COL6A3-214ENST00000493608 CHRNA7P36544 502 aa8.29□□□□□ -1.08
COL6A3-214ENST00000493608 SERPINB10P48595 397 aa8.29□□□□□ -1.08
COL6A3-214ENST00000493608 RAB9AP51151 201 aa8.29□□□□□ -1.08
COL6A3-214ENST00000493608 LUMP51884 338 aaPredicted RBP8.29□□□□□ -1.08
COL6A3-214ENST00000493608 ZNF660Q6AZW8 331 aaPredicted RBP8.29□□□□□ -1.08
COL6A3-214ENST00000493608 TPRA1Q86W33 373 aa8.29□□□□□ -1.08
COL6A3-214ENST00000493608 MINDY2Q8NBR6 621 aa8.29□□□□□ -1.08
COL6A3-214ENST00000493608 OR11H1Q8NG94 326 aa8.29□□□□□ -1.08
COL6A3-214ENST00000493608 LGALS14Q8TCE9 139 aa8.29□□□□□ -1.08
COL6A3-214ENST00000493608 NUDCD2Q8WVJ2 157 aa8.29□□□□□ -1.08
COL6A3-214ENST00000493608 C4orf3Q8WVX3 66 aa8.29□□□□□ -1.08
COL6A3-214ENST00000493608 C5orf30Q96GV9 206 aa8.29□□□□□ -1.08
COL6A3-214ENST00000493608 GINS4Q9BRT9 223 aa8.29□□□□□ -1.08
COL6A3-214ENST00000493608 CABLES2Q9BTV7 478 aa8.29□□□□□ -1.08
COL6A3-214ENST00000493608 ALX4Q9H161 411 aaPredicted RBP8.29□□□□□ -1.08
COL6A3-214ENST00000493608 NUBP2Q9Y5Y2 271 aa8.29□□□□□ -1.08
COL6A3-214ENST00000493608 TNCP24821 2201 aa8.28□□□□□ -1.08
COL6A3-214ENST00000493608 TMEM235A6NFC5 223 aa8.28□□□□□ -1.08
COL6A3-214ENST00000493608 SLC25A17O43808 307 aa8.28□□□□□ -1.08
COL6A3-214ENST00000493608 RBBP9O75884 186 aa8.28□□□□□ -1.08
COL6A3-214ENST00000493608 CA2P00918 260 aa8.28□□□□□ -1.08
COL6A3-214ENST00000493608 APOA2P02652 100 aa8.28□□□□□ -1.08
COL6A3-214ENST00000493608 CD36P16671 472 aa8.28□□□□□ -1.08
COL6A3-214ENST00000493608 TGFBR1P36897 503 aa8.28□□□□□ -1.08
COL6A3-214ENST00000493608 GNB1P62873 340 aa8.28□□□□□ -1.08
COL6A3-214ENST00000493608 EGFEM1PQ0D2K5 195 aa8.28□□□□□ -1.08
COL6A3-214ENST00000493608 PJVKQ0ZLH3 352 aa8.28□□□□□ -1.08
COL6A3-214ENST00000493608 IDNKQ5T6J7 187 aa8.28□□□□□ -1.08
COL6A3-214ENST00000493608 SFXN4Q6P4A7 337 aa8.28□□□□□ -1.08
COL6A3-214ENST00000493608 UNQ5815/PRO19632Q6UWF5 114 aa8.28□□□□□ -1.08
COL6A3-214ENST00000493608 PPP1R27Q86WC6 154 aa8.28□□□□□ -1.08
COL6A3-214ENST00000493608 BVESQ8NE79 360 aa8.28□□□□□ -1.08
COL6A3-214ENST00000493608 LFNGQ8NES3 379 aa8.28□□□□□ -1.08
COL6A3-214ENST00000493608 OR5M8Q8NGP6 311 aa8.28□□□□□ -1.08
COL6A3-214ENST00000493608 OR5H6Q8NGV6 325 aa8.28□□□□□ -1.08
COL6A3-214ENST00000493608 MYOZ3Q8TDC0 251 aa8.28□□□□□ -1.08
COL6A3-214ENST00000493608 DPF1Q92782 380 aa8.28□□□□□ -1.08
COL6A3-214ENST00000493608 FLYWCH2Q96CP2 140 aaKnown RBP8.28□□□□□ -1.08
COL6A3-214ENST00000493608 UBE2E2Q96LR5 201 aa8.28□□□□□ -1.08
COL6A3-214ENST00000493608 MS4A10Q96PG2 267 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms