RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 KIAA1456Q9P272 454 aa11.1□□□□□ -0.63
CCM2-217ENST00000492883 RABL2AQ9UBK7 228 aaPredicted RBP11.1□□□□□ -0.63
CCM2-217ENST00000492883 KLK11Q9UBX7 282 aa11.1□□□□□ -0.63
CCM2-217ENST00000492883 RABL2BQ9UNT1 228 aa11.1□□□□□ -0.63
CCM2-217ENST00000492883 ATRQ13535 2644 aa11.1□□□□□ -0.63
CCM2-217ENST00000492883 FABP12A6NFH5 140 aa11.09□□□□□ -0.63
CCM2-217ENST00000492883 NBR2O15453 112 aa11.09□□□□□ -0.63
CCM2-217ENST00000492883 CNTFRP26992 372 aa11.09□□□□□ -0.63
CCM2-217ENST00000492883 DUTP33316 252 aaKnown RBP11.09□□□□□ -0.63
CCM2-217ENST00000492883 S100A5P33763 92 aa11.09□□□□□ -0.63
CCM2-217ENST00000492883 HRH1P35367 487 aa11.09□□□□□ -0.63
CCM2-217ENST00000492883 KRTAP10-3P60369 221 aa11.09□□□□□ -0.63
CCM2-217ENST00000492883 HERV-K104P61576 105 aa11.09□□□□□ -0.63
CCM2-217ENST00000492883 TSPAN5P62079 268 aa11.09□□□□□ -0.63
CCM2-217ENST00000492883 RPS16P62249 146 aaKnown RBP11.09□□□□□ -0.63
CCM2-217ENST00000492883 MRPS10P82664 201 aaKnown RBP11.09□□□□□ -0.63
CCM2-217ENST00000492883 TAGLNQ01995 201 aaKnown RBP11.09□□□□□ -0.63
CCM2-217ENST00000492883 CBX3Q13185 183 aa11.09□□□□□ -0.63
CCM2-217ENST00000492883 DYRK1AQ13627 763 aa11.09□□□□□ -0.63
CCM2-217ENST00000492883 DHRS11Q6UWP2 260 aa11.09□□□□□ -0.63
CCM2-217ENST00000492883 SLC35E3Q7Z769 313 aa11.09□□□□□ -0.63
CCM2-217ENST00000492883 CENPVQ7Z7K6 275 aaPredicted RBP11.09□□□□□ -0.63
CCM2-217ENST00000492883 PDPNQ86YL7 162 aa11.09□□□□□ -0.63
CCM2-217ENST00000492883 FLYWCH2Q96CP2 140 aaKnown RBP11.09□□□□□ -0.63
CCM2-217ENST00000492883 C5orf30Q96GV9 206 aa11.09□□□□□ -0.63
CCM2-217ENST00000492883 RNF5Q99942 180 aa11.09□□□□□ -0.63
CCM2-217ENST00000492883 ZNF2Q9BSG1 426 aaPredicted RBP11.09□□□□□ -0.63
CCM2-217ENST00000492883 SLC5A7Q9GZV3 580 aa11.09□□□□□ -0.63
CCM2-217ENST00000492883 CCL28Q9NRJ3 127 aa11.09□□□□□ -0.63
CCM2-217ENST00000492883 RBMX2Q9Y388 322 aaKnown RBP11.09□□□□□ -0.63
CCM2-217ENST00000492883 GABARAPH6UMI1 98 aa11.08□□□□□ -0.64
CCM2-217ENST00000492883 RRASP10301 218 aa11.08□□□□□ -0.64
CCM2-217ENST00000492883 PLGLAQ15195 96 aa11.08□□□□□ -0.64
CCM2-217ENST00000492883 RTL8BQ17RB0 113 aa11.08□□□□□ -0.64
CCM2-217ENST00000492883 TMEM17Q86X19 198 aa11.08□□□□□ -0.64
CCM2-217ENST00000492883 FAM71E2Q8N5Q1 922 aa11.08□□□□□ -0.64
CCM2-217ENST00000492883 BVESQ8NE79 360 aa11.08□□□□□ -0.64
CCM2-217ENST00000492883 NPBQ8NG41 125 aa11.08□□□□□ -0.64
CCM2-217ENST00000492883 TSNAXQ99598 290 aaKnown RBP11.08□□□□□ -0.64
CCM2-217ENST00000492883 MTFP1Q9UDX5 166 aa11.08□□□□□ -0.64
CCM2-217ENST00000492883 A3GALT2U3KPV4 340 aa11.08□□□□□ -0.64
CCM2-217ENST00000492883 IGLV2-14P01704 120 aa11.07□□□□□ -0.64
CCM2-217ENST00000492883 IGHG2P01859 326 aa11.07□□□□□ -0.64
CCM2-217ENST00000492883 IGKV1-16P04430 117 aa11.07□□□□□ -0.64
CCM2-217ENST00000492883 IFNA6P05013 189 aa11.07□□□□□ -0.64
CCM2-217ENST00000492883 DGCR2P98153 550 aa11.07□□□□□ -0.64
CCM2-217ENST00000492883 ACTBL2Q562R1 376 aa11.07□□□□□ -0.64
CCM2-217ENST00000492883 LIN54Q6MZP7 749 aa11.07□□□□□ -0.64
CCM2-217ENST00000492883 FOXRED2Q8IWF2 684 aa11.07□□□□□ -0.64
CCM2-217ENST00000492883 C11orf44Q8N8P7 122 aa11.07□□□□□ -0.64
CCM2-217ENST00000492883 ZBTB34Q8NCN2 500 aa11.07□□□□□ -0.64
CCM2-217ENST00000492883 HSD17B10Q99714 261 aaKnown RBP11.07□□□□□ -0.64
CCM2-217ENST00000492883 CITED1Q99966 193 aa11.07□□□□□ -0.64
CCM2-217ENST00000492883 WNT10AQ9GZT5 417 aa11.07□□□□□ -0.64
CCM2-217ENST00000492883 TAS2R8Q9NYW2 309 aa11.07□□□□□ -0.64
CCM2-217ENST00000492883 PRELID3BQ9Y3B1 194 aa11.07□□□□□ -0.64
CCM2-217ENST00000492883 LINC01548A6NM66 108 aa11.06□□□□□ -0.64
CCM2-217ENST00000492883 LINC00473A8K010 186 aa11.06□□□□□ -0.64
CCM2-217ENST00000492883 M0QYG6 137 aa11.06□□□□□ -0.64
CCM2-217ENST00000492883 RRHO14718 337 aa11.06□□□□□ -0.64
CCM2-217ENST00000492883 SHOXO15266 292 aa11.06□□□□□ -0.64
CCM2-217ENST00000492883 KCNAB3O43448 404 aa11.06□□□□□ -0.64
CCM2-217ENST00000492883 TNFSF12O43508 249 aa11.06□□□□□ -0.64
CCM2-217ENST00000492883 FCGR3BO75015 233 aa11.06□□□□□ -0.64
CCM2-217ENST00000492883 MSMO1Q15800 293 aa11.06□□□□□ -0.64
CCM2-217ENST00000492883 C5orf64Q2M2E5 130 aa11.06□□□□□ -0.64
CCM2-217ENST00000492883 RNASE10Q5GAN6 216 aaKnown RBP11.06□□□□□ -0.64
CCM2-217ENST00000492883 ZNF660Q6AZW8 331 aaPredicted RBP11.06□□□□□ -0.64
CCM2-217ENST00000492883 ZNF66Q6ZN08 573 aa11.06□□□□□ -0.64
CCM2-217ENST00000492883 KCTD9Q7L273 389 aa11.06□□□□□ -0.64
CCM2-217ENST00000492883 MFSD4AQ8N468 514 aa11.06□□□□□ -0.64
CCM2-217ENST00000492883 OR5AU1Q8NGC0 362 aa11.06□□□□□ -0.64
CCM2-217ENST00000492883 TCTEX1D2Q8WW35 142 aa11.06□□□□□ -0.64
CCM2-217ENST00000492883 BORCS5Q969J3 196 aa11.06□□□□□ -0.64
CCM2-217ENST00000492883 MOB3AQ96BX8 217 aa11.06□□□□□ -0.64
CCM2-217ENST00000492883 FBXL15Q9H469 300 aa11.06□□□□□ -0.64
CCM2-217ENST00000492883 ZNF107Q9UII5 783 aaPredicted RBP11.06□□□□□ -0.64
CCM2-217ENST00000492883 LINC00527Q9UJ94 153 aa11.06□□□□□ -0.64
CCM2-217ENST00000492883 AP4M1O00189 453 aa11.05□□□□□ -0.64
CCM2-217ENST00000492883 CTDSPLO15194 276 aa11.05□□□□□ -0.64
CCM2-217ENST00000492883 NDUFA3O95167 84 aa11.05□□□□□ -0.64
CCM2-217ENST00000492883 CRYZL1O95825 349 aa11.05□□□□□ -0.64
CCM2-217ENST00000492883 CD3DP04234 171 aa11.05□□□□□ -0.64
CCM2-217ENST00000492883 LGALS7P47929 136 aa11.05□□□□□ -0.64
CCM2-217ENST00000492883 TAS2R19P59542 299 aa11.05□□□□□ -0.64
CCM2-217ENST00000492883 RPL30P62888 115 aaKnown RBP11.05□□□□□ -0.64
CCM2-217ENST00000492883 SSBP1Q04837 148 aaKnown RBP11.05□□□□□ -0.64
CCM2-217ENST00000492883 PSG5Q15238 335 aa11.05□□□□□ -0.64
CCM2-217ENST00000492883 OR2B11Q5JQS5 317 aa11.05□□□□□ -0.64
CCM2-217ENST00000492883 VAX1Q5SQQ9 334 aa11.05□□□□□ -0.64
CCM2-217ENST00000492883 FOXB2Q5VYV0 432 aa11.05□□□□□ -0.64
CCM2-217ENST00000492883 TMEM229BQ8NBD8 167 aa11.05□□□□□ -0.64
CCM2-217ENST00000492883 SMIM4Q8WVI0 70 aa11.05□□□□□ -0.64
CCM2-217ENST00000492883 DDB2Q92466 427 aa11.05□□□□□ -0.64
CCM2-217ENST00000492883 HARBI1Q96MB7 349 aa11.05□□□□□ -0.64
CCM2-217ENST00000492883 NOL4LQ96MY1 436 aaPredicted RBP11.05□□□□□ -0.64
CCM2-217ENST00000492883 SOSTQ9BQB4 213 aa11.05□□□□□ -0.64
CCM2-217ENST00000492883 HSPB9Q9BQS6 159 aa11.05□□□□□ -0.64
CCM2-217ENST00000492883 METTL1Q9UBP6 276 aaKnown RBP11.05□□□□□ -0.64
CCM2-217ENST00000492883 PSMB11A5LHX3 300 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms