RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 TMEM33P57088 247 aa11.39□□□□□ -0.59
SMPD4-219ENST00000491128 SPINK9Q5DT21 86 aa11.39□□□□□ -0.59
SMPD4-219ENST00000491128 PERPQ96FX8 193 aa11.39□□□□□ -0.59
SMPD4-219ENST00000491128 BSCL2Q96G97 398 aaPredicted RBP11.39□□□□□ -0.59
SMPD4-219ENST00000491128 ZNF251Q9BRH9 671 aa11.39□□□□□ -0.59
SMPD4-219ENST00000491128 NCOR1P1Q9H4R4 102 aa11.39□□□□□ -0.59
SMPD4-219ENST00000491128 TAS2R3Q9NYW6 316 aa11.39□□□□□ -0.59
SMPD4-219ENST00000491128 KLF2Q9Y5W3 355 aaPredicted RBP11.39□□□□□ -0.59
SMPD4-219ENST00000491128 HMSDA8MTL9 139 aa11.38□□□□□ -0.59
SMPD4-219ENST00000491128 K7EPK0 472 aa11.38□□□□□ -0.59
SMPD4-219ENST00000491128 SPDEFO95238 335 aa11.38□□□□□ -0.59
SMPD4-219ENST00000491128 IGHV1-8P0DP01 117 aa11.38□□□□□ -0.59
SMPD4-219ENST00000491128 S100A11P31949 105 aa11.38□□□□□ -0.59
SMPD4-219ENST00000491128 KRTAP10-9P60411 292 aa11.38□□□□□ -0.59
SMPD4-219ENST00000491128 LCN2P80188 198 aa11.38□□□□□ -0.59
SMPD4-219ENST00000491128 FAM71E2Q8N5Q1 922 aa11.38□□□□□ -0.59
SMPD4-219ENST00000491128 SMIM3Q9BZL3 60 aa11.38□□□□□ -0.59
SMPD4-219ENST00000491128 RCL1Q9Y2P8 373 aaKnown RBP11.38□□□□□ -0.59
SMPD4-219ENST00000491128 H3BP45 60 aa11.38□□□□□ -0.59
SMPD4-219ENST00000491128 SSSCA1O60232 199 aa11.38□□□□□ -0.59
SMPD4-219ENST00000491128 COX6B1P14854 86 aa11.38□□□□□ -0.59
SMPD4-219ENST00000491128 M6PRP20645 277 aa11.38□□□□□ -0.59
SMPD4-219ENST00000491128 PRSS54Q6PEW0 395 aa11.38□□□□□ -0.59
SMPD4-219ENST00000491128 INO80EQ8NBZ0 244 aaPredicted RBP11.38□□□□□ -0.59
SMPD4-219ENST00000491128 OR4D5Q8NGN0 318 aa11.38□□□□□ -0.59
SMPD4-219ENST00000491128 LINC00574Q9H8X3 128 aa11.38□□□□□ -0.59
SMPD4-219ENST00000491128 MIOXQ9UGB7 285 aa11.38□□□□□ -0.59
SMPD4-219ENST00000491128 RAB29O14966 203 aa11.37□□□□□ -0.59
SMPD4-219ENST00000491128 SLC25A4P12235 298 aa11.37□□□□□ -0.59
SMPD4-219ENST00000491128 SRPXP78539 464 aa11.37□□□□□ -0.59
SMPD4-219ENST00000491128 TLE4Q04727 773 aa11.37□□□□□ -0.59
SMPD4-219ENST00000491128 CATR1Q13166 79 aa11.37□□□□□ -0.59
SMPD4-219ENST00000491128 SLC25A48Q6ZT89 311 aaKnown RBP11.37□□□□□ -0.59
SMPD4-219ENST00000491128 ZNF295-AS1Q8N0V1 137 aa11.37□□□□□ -0.59
SMPD4-219ENST00000491128 ABHD12Q8N2K0 398 aa11.37□□□□□ -0.59
SMPD4-219ENST00000491128 ZNF383Q8NA42 475 aa11.37□□□□□ -0.59
SMPD4-219ENST00000491128 SPOCK3Q9BQ16 436 aa11.37□□□□□ -0.59
SMPD4-219ENST00000491128 PATZ1Q9HBE1 687 aaKnown RBP11.37□□□□□ -0.59
SMPD4-219ENST00000491128 LEUTXA8MZ59 168 aa11.37□□□□□ -0.59
SMPD4-219ENST00000491128 SHOXO15266 292 aa11.37□□□□□ -0.59
SMPD4-219ENST00000491128 DEDDO75618 318 aa11.37□□□□□ -0.59
SMPD4-219ENST00000491128 IGKV1-16P04430 117 aa11.37□□□□□ -0.59
SMPD4-219ENST00000491128 OR10X1Q8NGY0 326 aa11.37□□□□□ -0.59
SMPD4-219ENST00000491128 SSBP3Q9BWW4 388 aaPredicted RBP11.37□□□□□ -0.59
SMPD4-219ENST00000491128 ZC4H2Q9NQZ6 224 aa11.37□□□□□ -0.59
SMPD4-219ENST00000491128 IGHV3-72A0A0B4J1Y9 119 aa11.36□□□□□ -0.59
SMPD4-219ENST00000491128 NKX2-1P43699 371 aaPredicted RBP11.36□□□□□ -0.59
SMPD4-219ENST00000491128 ALKAL2Q6UX46 152 aa11.36□□□□□ -0.59
SMPD4-219ENST00000491128 ZBTB34Q8NCN2 500 aa11.36□□□□□ -0.59
SMPD4-219ENST00000491128 HSD17B10Q99714 261 aaKnown RBP11.36□□□□□ -0.59
SMPD4-219ENST00000491128 MMP26Q9NRE1 261 aa11.36□□□□□ -0.59
SMPD4-219ENST00000491128 NAV2Q8IVL1 2488 aa11.36□□□□□ -0.59
SMPD4-219ENST00000491128 GCN1Q92616 2671 aaKnown RBP11.36□□□□□ -0.59
SMPD4-219ENST00000491128 RNF212BA8MTL3 300 aa11.36□□□□□ -0.59
SMPD4-219ENST00000491128 RBMXL2O75526 392 aaKnown RBP11.36□□□□□ -0.59
SMPD4-219ENST00000491128 TMEM50AO95807 157 aa11.36□□□□□ -0.59
SMPD4-219ENST00000491128 CT45A6P0DMU7 189 aa11.36□□□□□ -0.59
SMPD4-219ENST00000491128 CT45A5P0DMU8 189 aa11.36□□□□□ -0.59
SMPD4-219ENST00000491128 CT45A7P0DMV0 189 aa11.36□□□□□ -0.59
SMPD4-219ENST00000491128 ATP5J2P56134 94 aa11.36□□□□□ -0.59
SMPD4-219ENST00000491128 OR2B8PP59922 312 aa11.36□□□□□ -0.59
SMPD4-219ENST00000491128 KLRD1Q13241 179 aa11.36□□□□□ -0.59
SMPD4-219ENST00000491128 TEX261Q6UWH6 196 aa11.36□□□□□ -0.59
SMPD4-219ENST00000491128 ACOT7LQ6ZUV0 252 aa11.36□□□□□ -0.59
SMPD4-219ENST00000491128 PNKDQ8N490 385 aa11.36□□□□□ -0.59
SMPD4-219ENST00000491128 DMBX1Q8NFW5 382 aa11.36□□□□□ -0.59
SMPD4-219ENST00000491128 ASB13Q8WXK3 278 aa11.36□□□□□ -0.59
SMPD4-219ENST00000491128 MRPL20Q9BYC9 149 aaKnown RBP11.36□□□□□ -0.59
SMPD4-219ENST00000491128 U3KQ87 197 aa11.36□□□□□ -0.59
SMPD4-219ENST00000491128 ZANQ9Y493 2812 aa11.35□□□□□ -0.59
SMPD4-219ENST00000491128 TRAV3A0A0B4J244 114 aa11.35□□□□□ -0.59
SMPD4-219ENST00000491128 J3QR06 171 aa11.35□□□□□ -0.59
SMPD4-219ENST00000491128 ST8SIA3O43173 380 aa11.35□□□□□ -0.59
SMPD4-219ENST00000491128 OR2F2O95006 317 aa11.35□□□□□ -0.59
SMPD4-219ENST00000491128 IAPPP10997 89 aa11.35□□□□□ -0.59
SMPD4-219ENST00000491128 RAB7AP51149 207 aa11.35□□□□□ -0.59
SMPD4-219ENST00000491128 RPS16P62249 146 aaKnown RBP11.35□□□□□ -0.59
SMPD4-219ENST00000491128 ESCO2Q56NI9 601 aa11.35□□□□□ -0.59
SMPD4-219ENST00000491128 TMEM65Q6PI78 240 aa11.35□□□□□ -0.59
SMPD4-219ENST00000491128 S1PR3Q99500 378 aa11.35□□□□□ -0.59
SMPD4-219ENST00000491128 LOC105371242A0A075B767 164 aa11.35□□□□□ -0.59
SMPD4-219ENST00000491128 FAM24AA6NFZ4 105 aa11.35□□□□□ -0.59
SMPD4-219ENST00000491128 MARCH11A6NNE9 402 aa11.35□□□□□ -0.59
SMPD4-219ENST00000491128 WRBO00258 174 aa11.35□□□□□ -0.59
SMPD4-219ENST00000491128 CHST1O43916 411 aa11.35□□□□□ -0.59
SMPD4-219ENST00000491128 HKR1P10072 659 aa11.35□□□□□ -0.59
SMPD4-219ENST00000491128 NHLH2Q02577 135 aa11.35□□□□□ -0.59
SMPD4-219ENST00000491128 SMCO1Q147U7 214 aa11.35□□□□□ -0.59
SMPD4-219ENST00000491128 ZNF66Q6ZN08 573 aa11.35□□□□□ -0.59
SMPD4-219ENST00000491128 ZNF767PQ75MW2 155 aa11.35□□□□□ -0.59
SMPD4-219ENST00000491128 ZNF471Q9BX82 626 aaPredicted RBP11.35□□□□□ -0.59
SMPD4-219ENST00000491128 RAB9BQ9NP90 201 aa11.35□□□□□ -0.59
SMPD4-219ENST00000491128 APCP25054 2843 aa11.35□□□□□ -0.59
SMPD4-219ENST00000491128 ANKRD17O75179 2603 aaKnown RBP11.34□□□□□ -0.59
SMPD4-219ENST00000491128 ZNF469Q96JG9 3925 aaPredicted RBP11.34□□□□□ -0.59
SMPD4-219ENST00000491128 RLN2P04090 185 aa11.34□□□□□ -0.59
SMPD4-219ENST00000491128 CAV2P51636 162 aa11.34□□□□□ -0.59
SMPD4-219ENST00000491128 EXOSC2Q13868 293 aaKnown RBP11.34□□□□□ -0.59
SMPD4-219ENST00000491128 Q8N7P7 452 aa11.34□□□□□ -0.59
SMPD4-219ENST00000491128 ZNF680Q8NEM1 530 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms