RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 OR2B11Q5JQS5 317 aa8.8□□□□□ -1
UBE4B-210ENST00000488228 VAX1Q5SQQ9 334 aa8.8□□□□□ -1
UBE4B-210ENST00000488228 KCTD9Q7L273 389 aa8.8□□□□□ -1
UBE4B-210ENST00000488228 C16orf82Q7Z2V1 217 aa8.8□□□□□ -1
UBE4B-210ENST00000488228 C5orf56Q8N8D9 126 aa8.8□□□□□ -1
UBE4B-210ENST00000488228 TMEM229BQ8NBD8 167 aa8.8□□□□□ -1
UBE4B-210ENST00000488228 OR5AN1Q8NGI8 311 aa8.8□□□□□ -1
UBE4B-210ENST00000488228 OR4F5Q8NH21 305 aa8.8□□□□□ -1
UBE4B-210ENST00000488228 GIMAP1Q8WWP7 306 aa8.8□□□□□ -1
UBE4B-210ENST00000488228 TRIM63Q969Q1 353 aa8.8□□□□□ -1
UBE4B-210ENST00000488228 MOB3AQ96BX8 217 aa8.8□□□□□ -1
UBE4B-210ENST00000488228 AKR1E2Q96JD6 320 aa8.8□□□□□ -1
UBE4B-210ENST00000488228 GHITMQ9H3K2 345 aa8.8□□□□□ -1
UBE4B-210ENST00000488228 RANBP3Q9H6Z4 567 aaPredicted RBP8.8□□□□□ -1
UBE4B-210ENST00000488228 TAS2R8Q9NYW2 309 aa8.8□□□□□ -1
UBE4B-210ENST00000488228 NCBP2LA6PVI3 153 aaKnown RBP8.79□□□□□ -1
UBE4B-210ENST00000488228 CD74P04233 296 aa8.79□□□□□ -1
UBE4B-210ENST00000488228 IGKV1-16P04430 117 aa8.79□□□□□ -1
UBE4B-210ENST00000488228 CSF1P09603 554 aa8.79□□□□□ -1
UBE4B-210ENST00000488228 TBPP20226 339 aa8.79□□□□□ -1
UBE4B-210ENST00000488228 DUTP33316 252 aaKnown RBP8.79□□□□□ -1
UBE4B-210ENST00000488228 ETV6P41212 452 aa8.79□□□□□ -1
UBE4B-210ENST00000488228 THBS3P49746 956 aa8.79□□□□□ -1
UBE4B-210ENST00000488228 PPP5CP53041 499 aa8.79□□□□□ -1
UBE4B-210ENST00000488228 F2RL1P55085 397 aa8.79□□□□□ -1
UBE4B-210ENST00000488228 TSPAN5P62079 268 aa8.79□□□□□ -1
UBE4B-210ENST00000488228 RPL30P62888 115 aaKnown RBP8.79□□□□□ -1
UBE4B-210ENST00000488228 SSBP1Q04837 148 aaKnown RBP8.79□□□□□ -1
UBE4B-210ENST00000488228 MMDQ15546 238 aa8.79□□□□□ -1
UBE4B-210ENST00000488228 C9orf152Q5JTZ5 239 aa8.79□□□□□ -1
UBE4B-210ENST00000488228 STEAP1BQ6NZ63 245 aa8.79□□□□□ -1
UBE4B-210ENST00000488228 ZNF818PQ6ZRF7 136 aa8.79□□□□□ -1
UBE4B-210ENST00000488228 Q8N402 240 aa8.79□□□□□ -1
UBE4B-210ENST00000488228 OR4C16Q8NGL9 310 aa8.79□□□□□ -1
UBE4B-210ENST00000488228 OR6F1Q8NGZ6 308 aa8.79□□□□□ -1
UBE4B-210ENST00000488228 LINC01006Q8NI28 216 aa8.79□□□□□ -1
UBE4B-210ENST00000488228 SRRQ9GZT4 340 aa8.79□□□□□ -1
UBE4B-210ENST00000488228 BATF3Q9NR55 127 aa8.79□□□□□ -1
UBE4B-210ENST00000488228 SLC35D1Q9NTN3 355 aa8.79□□□□□ -1
UBE4B-210ENST00000488228 ANKRD20A5PA0PJZ0 165 aa8.78□□□□□ -1
UBE4B-210ENST00000488228 TSPAN9O75954 239 aa8.78□□□□□ -1
UBE4B-210ENST00000488228 RAB3DO95716 219 aa8.78□□□□□ -1
UBE4B-210ENST00000488228 IFNA6P05013 189 aa8.78□□□□□ -1
UBE4B-210ENST00000488228 FOXL1Q12952 345 aa8.78□□□□□ -1
UBE4B-210ENST00000488228 EIF4EBP1Q13541 118 aaPredicted RBP8.78□□□□□ -1
UBE4B-210ENST00000488228 ARSJQ5FYB0 599 aaPredicted RBP8.78□□□□□ -1
UBE4B-210ENST00000488228 C11orf88Q6PI97 169 aa8.78□□□□□ -1
UBE4B-210ENST00000488228 DHRS11Q6UWP2 260 aa8.78□□□□□ -1
UBE4B-210ENST00000488228 PDPNQ86YL7 162 aa8.78□□□□□ -1
UBE4B-210ENST00000488228 MFSD4AQ8N468 514 aa8.78□□□□□ -1
UBE4B-210ENST00000488228 FAM71E2Q8N5Q1 922 aa8.78□□□□□ -1
UBE4B-210ENST00000488228 BVESQ8NE79 360 aa8.78□□□□□ -1
UBE4B-210ENST00000488228 OR2T6Q8NHC8 308 aa8.78□□□□□ -1
UBE4B-210ENST00000488228 TCTEX1D2Q8WW35 142 aa8.78□□□□□ -1
UBE4B-210ENST00000488228 DDB2Q92466 427 aa8.78□□□□□ -1
UBE4B-210ENST00000488228 PRSS22Q9GZN4 317 aa8.78□□□□□ -1
UBE4B-210ENST00000488228 PLSCR3Q9NRY6 295 aa8.78□□□□□ -1
UBE4B-210ENST00000488228 PTTG2Q9NZH5 202 aa8.78□□□□□ -1
UBE4B-210ENST00000488228 ZNF107Q9UII5 783 aaPredicted RBP8.78□□□□□ -1
UBE4B-210ENST00000488228 GAB2Q9UQC2 676 aa8.78□□□□□ -1
UBE4B-210ENST00000488228 TNCP24821 2201 aa8.78□□□□□ -1
UBE4B-210ENST00000488228 CLPSL1A2RUU4 121 aa8.77□□□□□ -1.01
UBE4B-210ENST00000488228 M0QZK8 103 aa8.77□□□□□ -1.01
UBE4B-210ENST00000488228 NBR2O15453 112 aa8.77□□□□□ -1.01
UBE4B-210ENST00000488228 FGF16O43320 207 aa8.77□□□□□ -1.01
UBE4B-210ENST00000488228 FCGR3BO75015 233 aa8.77□□□□□ -1.01
UBE4B-210ENST00000488228 SLC22A5O76082 557 aa8.77□□□□□ -1.01
UBE4B-210ENST00000488228 CRYZL1O95825 349 aa8.77□□□□□ -1.01
UBE4B-210ENST00000488228 RLN1P04808 185 aa8.77□□□□□ -1.01
UBE4B-210ENST00000488228 AKAIN1P0CW23 69 aa8.77□□□□□ -1.01
UBE4B-210ENST00000488228 PTBP1P26599 531 aaKnown RBP eCLIP8.77□□□□□ -1.01
UBE4B-210ENST00000488228 MC5RP33032 325 aa8.77□□□□□ -1.01
UBE4B-210ENST00000488228 KLF9Q13886 244 aaPredicted RBP8.77□□□□□ -1.01
UBE4B-210ENST00000488228 RTL8BQ17RB0 113 aa8.77□□□□□ -1.01
UBE4B-210ENST00000488228 SCGB2B2Q4G0G5 96 aa8.77□□□□□ -1.01
UBE4B-210ENST00000488228 PHLDA2Q53GA4 152 aa8.77□□□□□ -1.01
UBE4B-210ENST00000488228 AADACL3Q5VUY0 350 aa8.77□□□□□ -1.01
UBE4B-210ENST00000488228 C12orf54Q6X4T0 127 aa8.77□□□□□ -1.01
UBE4B-210ENST00000488228 Q8N2B8 174 aa8.77□□□□□ -1.01
UBE4B-210ENST00000488228 ARRDC1Q8N5I2 433 aa8.77□□□□□ -1.01
UBE4B-210ENST00000488228 Q8N9W7 124 aa8.77□□□□□ -1.01
UBE4B-210ENST00000488228 OR51H1Q8NH63 302 aa8.77□□□□□ -1.01
UBE4B-210ENST00000488228 WFDC12Q8WWY7 111 aa8.77□□□□□ -1.01
UBE4B-210ENST00000488228 ADTRPQ96IZ2 230 aa8.77□□□□□ -1.01
UBE4B-210ENST00000488228 SDHCQ99643 169 aaPredicted RBP8.77□□□□□ -1.01
UBE4B-210ENST00000488228 HSD17B10Q99714 261 aaKnown RBP8.77□□□□□ -1.01
UBE4B-210ENST00000488228 THAP7Q9BT49 309 aaPredicted RBP8.77□□□□□ -1.01
UBE4B-210ENST00000488228 C16orf95Q9H693 158 aa8.77□□□□□ -1.01
UBE4B-210ENST00000488228 BEX1Q9HBH7 125 aa8.77□□□□□ -1.01
UBE4B-210ENST00000488228 AKIP1Q9NQ31 210 aa8.77□□□□□ -1.01
UBE4B-210ENST00000488228 TPSG1Q9NRR2 321 aa8.77□□□□□ -1.01
UBE4B-210ENST00000488228 RNF114Q9Y508 228 aa8.77□□□□□ -1.01
UBE4B-210ENST00000488228 TET2Q6N021 2002 aaPredicted RBP8.76□□□□□ -1.01
UBE4B-210ENST00000488228 HAX1O00165 279 aa8.76□□□□□ -1.01
UBE4B-210ENST00000488228 SLC25A17O43808 307 aa8.76□□□□□ -1.01
UBE4B-210ENST00000488228 ZNF735P0CB33 412 aa8.76□□□□□ -1.01
UBE4B-210ENST00000488228 PI3P19957 117 aa8.76□□□□□ -1.01
UBE4B-210ENST00000488228 GNRHRP30968 328 aa8.76□□□□□ -1.01
UBE4B-210ENST00000488228 VDAC2P45880 294 aaPredicted RBP8.76□□□□□ -1.01
UBE4B-210ENST00000488228 COMPP49747 757 aaPredicted RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms