RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 CCDC190Q86UF4 302 aa13.6□□□□□ -0.23
SHROOM1-205ENST00000488072 ZNF645Q8N7E2 425 aa13.6□□□□□ -0.23
SHROOM1-205ENST00000488072 GIMAP1Q8WWP7 306 aa13.6□□□□□ -0.23
SHROOM1-205ENST00000488072 FCAMRQ8WWV6 532 aa13.6□□□□□ -0.23
SHROOM1-205ENST00000488072 HSPB9Q9BQS6 159 aa13.6□□□□□ -0.23
SHROOM1-205ENST00000488072 SLC5A7Q9GZV3 580 aa13.6□□□□□ -0.23
SHROOM1-205ENST00000488072 BEX1Q9HBH7 125 aa13.6□□□□□ -0.23
SHROOM1-205ENST00000488072 RAB18Q9NP72 206 aa13.6□□□□□ -0.23
SHROOM1-205ENST00000488072 TAS2R8Q9NYW2 309 aa13.6□□□□□ -0.23
SHROOM1-205ENST00000488072 NDUFA13Q9P0J0 144 aa13.6□□□□□ -0.23
SHROOM1-205ENST00000488072 GAB2Q9UQC2 676 aa13.6□□□□□ -0.23
SHROOM1-205ENST00000488072 RBMX2Q9Y388 322 aaKnown RBP13.6□□□□□ -0.23
SHROOM1-205ENST00000488072 ANK2Q01484 3957 aa13.59□□□□□ -0.23
SHROOM1-205ENST00000488072 OR5H14A6NHG9 310 aa13.59□□□□□ -0.23
SHROOM1-205ENST00000488072 GABARAPH6UMI1 98 aa13.59□□□□□ -0.23
SHROOM1-205ENST00000488072 RBBP9O75884 186 aa13.59□□□□□ -0.23
SHROOM1-205ENST00000488072 VSIG10L2P0DP72 767 aa13.59□□□□□ -0.23
SHROOM1-205ENST00000488072 RPL15P61313 204 aaKnown RBP13.59□□□□□ -0.23
SHROOM1-205ENST00000488072 CNPY1Q3B7I2 92 aa13.59□□□□□ -0.23
SHROOM1-205ENST00000488072 DHRS11Q6UWP2 260 aa13.59□□□□□ -0.23
SHROOM1-205ENST00000488072 ZNF818PQ6ZRF7 136 aa13.59□□□□□ -0.23
SHROOM1-205ENST00000488072 SMIM4Q8WVI0 70 aa13.59□□□□□ -0.23
SHROOM1-205ENST00000488072 DDB2Q92466 427 aa13.59□□□□□ -0.23
SHROOM1-205ENST00000488072 NOL4LQ96MY1 436 aaPredicted RBP13.59□□□□□ -0.23
SHROOM1-205ENST00000488072 PRSS22Q9GZN4 317 aa13.59□□□□□ -0.23
SHROOM1-205ENST00000488072 TPSG1Q9NRR2 321 aa13.59□□□□□ -0.23
SHROOM1-205ENST00000488072 SLC35D1Q9NTN3 355 aa13.59□□□□□ -0.23
SHROOM1-205ENST00000488072 SRRM4A7MD48 611 aaKnown RBP13.58□□□□□ -0.24
SHROOM1-205ENST00000488072 FCN1O00602 326 aa13.58□□□□□ -0.24
SHROOM1-205ENST00000488072 TAS2R46P59540 309 aa13.58□□□□□ -0.24
SHROOM1-205ENST00000488072 MMDQ15546 238 aa13.58□□□□□ -0.24
SHROOM1-205ENST00000488072 Q8N2B8 174 aa13.58□□□□□ -0.24
SHROOM1-205ENST00000488072 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.58□□□□□ -0.24
SHROOM1-205ENST00000488072 WFDC12Q8WWY7 111 aa13.58□□□□□ -0.24
SHROOM1-205ENST00000488072 FBXL15Q9H469 300 aa13.58□□□□□ -0.24
SHROOM1-205ENST00000488072 WASHC3Q9Y3C0 194 aa13.58□□□□□ -0.24
SHROOM1-205ENST00000488072 MMP24Q9Y5R2 645 aa13.58□□□□□ -0.24
SHROOM1-205ENST00000488072 CTDSPLO15194 276 aa13.57□□□□□ -0.24
SHROOM1-205ENST00000488072 ZNF735P0CB33 412 aa13.57□□□□□ -0.24
SHROOM1-205ENST00000488072 GNRHRP30968 328 aa13.57□□□□□ -0.24
SHROOM1-205ENST00000488072 PYDC2Q56P42 97 aa13.57□□□□□ -0.24
SHROOM1-205ENST00000488072 C16orf82Q7Z2V1 217 aa13.57□□□□□ -0.24
SHROOM1-205ENST00000488072 FAM71E2Q8N5Q1 922 aa13.57□□□□□ -0.24
SHROOM1-205ENST00000488072 KLHDC1Q8N7A1 406 aa13.57□□□□□ -0.24
SHROOM1-205ENST00000488072 C3orf56Q8N813 242 aa13.57□□□□□ -0.24
SHROOM1-205ENST00000488072 OR2T6Q8NHC8 308 aa13.57□□□□□ -0.24
SHROOM1-205ENST00000488072 SPATA3Q8NHX4 192 aa13.57□□□□□ -0.24
SHROOM1-205ENST00000488072 MOB3AQ96BX8 217 aa13.57□□□□□ -0.24
SHROOM1-205ENST00000488072 CLCC1Q96S66 551 aa13.57□□□□□ -0.24
SHROOM1-205ENST00000488072 RANBP3Q9H6Z4 567 aaPredicted RBP13.57□□□□□ -0.24
SHROOM1-205ENST00000488072 ZNF107Q9UII5 783 aaPredicted RBP13.57□□□□□ -0.24
SHROOM1-205ENST00000488072 A3GALT2U3KPV4 340 aa13.57□□□□□ -0.24
SHROOM1-205ENST00000488072 TPPPO94811 219 aa13.56□□□□□ -0.24
SHROOM1-205ENST00000488072 IGLV2-23P01705 113 aa13.56□□□□□ -0.24
SHROOM1-205ENST00000488072 S100A5P33763 92 aa13.56□□□□□ -0.24
SHROOM1-205ENST00000488072 VDAC2P45880 294 aaPredicted RBP13.56□□□□□ -0.24
SHROOM1-205ENST00000488072 HERV-K104P61576 105 aa13.56□□□□□ -0.24
SHROOM1-205ENST00000488072 RPS16P62249 146 aaKnown RBP13.56□□□□□ -0.24
SHROOM1-205ENST00000488072 PSG5Q15238 335 aa13.56□□□□□ -0.24
SHROOM1-205ENST00000488072 ARSJQ5FYB0 599 aaPredicted RBP13.56□□□□□ -0.24
SHROOM1-205ENST00000488072 AADACL3Q5VUY0 350 aa13.56□□□□□ -0.24
SHROOM1-205ENST00000488072 MFSD4AQ8N468 514 aa13.56□□□□□ -0.24
SHROOM1-205ENST00000488072 TMEM229BQ8NBD8 167 aa13.56□□□□□ -0.24
SHROOM1-205ENST00000488072 OR6F1Q8NGZ6 308 aa13.56□□□□□ -0.24
SHROOM1-205ENST00000488072 MRGPRFQ96AM1 343 aa13.56□□□□□ -0.24
SHROOM1-205ENST00000488072 GHITMQ9H3K2 345 aa13.56□□□□□ -0.24
SHROOM1-205ENST00000488072 NBR2O15453 112 aa13.55□□□□□ -0.24
SHROOM1-205ENST00000488072 FGF16O43320 207 aa13.55□□□□□ -0.24
SHROOM1-205ENST00000488072 GSTZ1O43708 216 aaPredicted RBP13.55□□□□□ -0.24
SHROOM1-205ENST00000488072 FCGR3BO75015 233 aa13.55□□□□□ -0.24
SHROOM1-205ENST00000488072 CD74P04233 296 aa13.55□□□□□ -0.24
SHROOM1-205ENST00000488072 PI3P19957 117 aa13.55□□□□□ -0.24
SHROOM1-205ENST00000488072 THBS3P49746 956 aa13.55□□□□□ -0.24
SHROOM1-205ENST00000488072 TSPAN5P62079 268 aa13.55□□□□□ -0.24
SHROOM1-205ENST00000488072 NDPQ00604 133 aa13.55□□□□□ -0.24
SHROOM1-205ENST00000488072 PJVKQ0ZLH3 352 aa13.55□□□□□ -0.24
SHROOM1-205ENST00000488072 PHLDA2Q53GA4 152 aa13.55□□□□□ -0.24
SHROOM1-205ENST00000488072 VAX1Q5SQQ9 334 aa13.55□□□□□ -0.24
SHROOM1-205ENST00000488072 STEAP1BQ6NZ63 245 aa13.55□□□□□ -0.24
SHROOM1-205ENST00000488072 NPBQ8NG41 125 aa13.55□□□□□ -0.24
SHROOM1-205ENST00000488072 TCTEX1D2Q8WW35 142 aa13.55□□□□□ -0.24
SHROOM1-205ENST00000488072 AKR1E2Q96JD6 320 aa13.55□□□□□ -0.24
SHROOM1-205ENST00000488072 SDHCQ99643 169 aaPredicted RBP13.55□□□□□ -0.24
SHROOM1-205ENST00000488072 THAP7Q9BT49 309 aaPredicted RBP13.55□□□□□ -0.24
SHROOM1-205ENST00000488072 ZNF747Q9BV97 191 aa13.55□□□□□ -0.24
SHROOM1-205ENST00000488072 SLC25A17O43808 307 aa13.54□□□□□ -0.24
SHROOM1-205ENST00000488072 RAMP3O60896 148 aa13.54□□□□□ -0.24
SHROOM1-205ENST00000488072 RAB3DO95716 219 aa13.54□□□□□ -0.24
SHROOM1-205ENST00000488072 CRYZL1O95825 349 aa13.54□□□□□ -0.24
SHROOM1-205ENST00000488072 APOA2P02652 100 aa13.54□□□□□ -0.24
SHROOM1-205ENST00000488072 CD28P10747 220 aa13.54□□□□□ -0.24
SHROOM1-205ENST00000488072 MC5RP33032 325 aa13.54□□□□□ -0.24
SHROOM1-205ENST00000488072 TAGLNQ01995 201 aaKnown RBP13.54□□□□□ -0.24
SHROOM1-205ENST00000488072 C5orf64Q2M2E5 130 aa13.54□□□□□ -0.24
SHROOM1-205ENST00000488072 MRGPRG-AS1Q2M3A8 158 aa13.54□□□□□ -0.24
SHROOM1-205ENST00000488072 RNASE10Q5GAN6 216 aaKnown RBP13.54□□□□□ -0.24
SHROOM1-205ENST00000488072 KCTD9Q7L273 389 aa13.54□□□□□ -0.24
SHROOM1-205ENST00000488072 VKORC1L1Q8N0U8 176 aa13.54□□□□□ -0.24
SHROOM1-205ENST00000488072 OR4C16Q8NGL9 310 aa13.54□□□□□ -0.24
SHROOM1-205ENST00000488072 TRIM63Q969Q1 353 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms