RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 LINC00205P59089 165 aa18.28■□□□□ 0.52
PLOD3-215ENST00000487563 MOGAT2Q3SYC2 334 aa18.28■□□□□ 0.52
PLOD3-215ENST00000487563 ZNF562Q6V9R5 426 aa18.28■□□□□ 0.52
PLOD3-215ENST00000487563 LFNGQ8NES3 379 aa18.28■□□□□ 0.52
PLOD3-215ENST00000487563 OR10R2Q8NGX6 335 aa18.28■□□□□ 0.52
PLOD3-215ENST00000487563 OR10J5Q8NHC4 309 aa18.28■□□□□ 0.52
PLOD3-215ENST00000487563 ARPC1AQ92747 370 aa18.28■□□□□ 0.52
PLOD3-215ENST00000487563 FLYWCH2Q96CP2 140 aaKnown RBP18.28■□□□□ 0.52
PLOD3-215ENST00000487563 TOLLIPQ9H0E2 274 aa18.28■□□□□ 0.52
PLOD3-215ENST00000487563 OR2D2Q9H210 308 aa18.28■□□□□ 0.52
PLOD3-215ENST00000487563 NDUFB11Q9NX14 153 aa18.28■□□□□ 0.52
PLOD3-215ENST00000487563 LSM4Q9Y4Z0 139 aaKnown RBP18.28■□□□□ 0.52
PLOD3-215ENST00000487563 IFITM5A6NNB3 132 aa18.27■□□□□ 0.52
PLOD3-215ENST00000487563 SLC25A17O43808 307 aa18.27■□□□□ 0.52
PLOD3-215ENST00000487563 SAP30O75446 220 aa18.27■□□□□ 0.52
PLOD3-215ENST00000487563 OR8U9P0C7N5 309 aa18.27■□□□□ 0.52
PLOD3-215ENST00000487563 NHLRC4P0CG21 123 aaPredicted RBP18.27■□□□□ 0.52
PLOD3-215ENST00000487563 GNB3P16520 340 aa18.27■□□□□ 0.52
PLOD3-215ENST00000487563 RAB3BP20337 219 aa18.27■□□□□ 0.52
PLOD3-215ENST00000487563 SLURP1P55000 103 aa18.27■□□□□ 0.52
PLOD3-215ENST00000487563 TPPP2P59282 170 aa18.27■□□□□ 0.52
PLOD3-215ENST00000487563 CBX3Q13185 183 aa18.27■□□□□ 0.52
PLOD3-215ENST00000487563 AKIRIN2Q53H80 203 aa18.27■□□□□ 0.52
PLOD3-215ENST00000487563 ZNF429Q86V71 674 aa18.27■□□□□ 0.52
PLOD3-215ENST00000487563 GRPEL2Q8TAA5 225 aa18.27■□□□□ 0.52
PLOD3-215ENST00000487563 WWC2-AS2Q96NR7 200 aa18.27■□□□□ 0.52
PLOD3-215ENST00000487563 MS4A10Q96PG2 267 aa18.27■□□□□ 0.52
PLOD3-215ENST00000487563 CABLES2Q9BTV7 478 aa18.27■□□□□ 0.52
PLOD3-215ENST00000487563 KCNK7Q9Y2U2 307 aa18.27■□□□□ 0.52
PLOD3-215ENST00000487563 RBM7Q9Y580 266 aaKnown RBP18.27■□□□□ 0.52
PLOD3-215ENST00000487563 IGHV3-11P01762 117 aa18.26■□□□□ 0.51
PLOD3-215ENST00000487563 RAB6AP20340 208 aa18.26■□□□□ 0.51
PLOD3-215ENST00000487563 TALDO1P37837 337 aa18.26■□□□□ 0.51
PLOD3-215ENST00000487563 ARFRP1Q13795 201 aa18.26■□□□□ 0.51
PLOD3-215ENST00000487563 IGSF11Q5DX21 431 aa18.26■□□□□ 0.51
PLOD3-215ENST00000487563 MAFIPQ8WZ33 124 aa18.26■□□□□ 0.51
PLOD3-215ENST00000487563 GINS4Q9BRT9 223 aa18.26■□□□□ 0.51
PLOD3-215ENST00000487563 TPSG1Q9NRR2 321 aa18.26■□□□□ 0.51
PLOD3-215ENST00000487563 RAB26Q9ULW5 256 aa18.26■□□□□ 0.51
PLOD3-215ENST00000487563 IGHV4OR15-8A0A075B7B6 117 aa18.25■□□□□ 0.51
PLOD3-215ENST00000487563 A0A087WW49 117 aa18.25■□□□□ 0.51
PLOD3-215ENST00000487563 TRDV1A0A1B0GX56 115 aa18.25■□□□□ 0.51
PLOD3-215ENST00000487563 SHISA3A0PJX4 238 aa18.25■□□□□ 0.51
PLOD3-215ENST00000487563 METTL21EPA6NDL7 271 aa18.25■□□□□ 0.51
PLOD3-215ENST00000487563 MFNGO00587 321 aa18.25■□□□□ 0.51
PLOD3-215ENST00000487563 CNIH1O95406 144 aa18.25■□□□□ 0.51
PLOD3-215ENST00000487563 GSTT2P0CG29 244 aa18.25■□□□□ 0.51
PLOD3-215ENST00000487563 GSTT2BP0CG30 244 aa18.25■□□□□ 0.51
PLOD3-215ENST00000487563 HIST1H1DP16402 221 aaKnown RBP18.25■□□□□ 0.51
PLOD3-215ENST00000487563 FXYD3Q14802 87 aa18.25■□□□□ 0.51
PLOD3-215ENST00000487563 DLX4Q92988 240 aaPredicted RBP18.25■□□□□ 0.51
PLOD3-215ENST00000487563 SLA2Q9H6Q3 261 aa18.25■□□□□ 0.51
PLOD3-215ENST00000487563 ZNF355PQ9NSJ1 428 aa18.25■□□□□ 0.51
PLOD3-215ENST00000487563 TRGV3P03979 118 aa18.24■□□□□ 0.51
PLOD3-215ENST00000487563 C22orf42Q6IC83 251 aa18.24■□□□□ 0.51
PLOD3-215ENST00000487563 HARBI1Q96MB7 349 aa18.24■□□□□ 0.51
PLOD3-215ENST00000487563 SDHAF2Q9NX18 166 aa18.24■□□□□ 0.51
PLOD3-215ENST00000487563 ZNF230Q9UIE0 474 aaPredicted RBP18.24■□□□□ 0.51
PLOD3-215ENST00000487563 TRBV6-7A0A0A0MS04 114 aa18.23■□□□□ 0.51
PLOD3-215ENST00000487563 A0A0B4J203 849 aa18.23■□□□□ 0.51
PLOD3-215ENST00000487563 RAB27BO00194 218 aa18.23■□□□□ 0.51
PLOD3-215ENST00000487563 DIRAS3O95661 229 aa18.23■□□□□ 0.51
PLOD3-215ENST00000487563 SNRPBP14678 240 aaKnown RBP18.23■□□□□ 0.51
PLOD3-215ENST00000487563 GABARAPL2P60520 117 aa18.23■□□□□ 0.51
PLOD3-215ENST00000487563 PITPNAQ00169 270 aa18.23■□□□□ 0.51
PLOD3-215ENST00000487563 ATG5Q9H1Y0 275 aa18.23■□□□□ 0.51
PLOD3-215ENST00000487563 U3KQK5 164 aa18.23■□□□□ 0.51
PLOD3-215ENST00000487563 HSPB1P04792 205 aaKnown RBP18.22■□□□□ 0.51
PLOD3-215ENST00000487563 LGALS7P47929 136 aa18.22■□□□□ 0.51
PLOD3-215ENST00000487563 RTL8BQ17RB0 113 aa18.22■□□□□ 0.51
PLOD3-215ENST00000487563 CENPOQ9BU64 300 aa18.22■□□□□ 0.51
PLOD3-215ENST00000487563 SMIM30A4D0T7 59 aa18.21■□□□□ 0.51
PLOD3-215ENST00000487563 ARPC1BO15143 372 aaKnown RBP18.21■□□□□ 0.51
PLOD3-215ENST00000487563 SHOXO15266 292 aa18.21■□□□□ 0.51
PLOD3-215ENST00000487563 GALP22466 123 aa18.21■□□□□ 0.51
PLOD3-215ENST00000487563 PSMB9P28065 219 aa18.21■□□□□ 0.51
PLOD3-215ENST00000487563 TAGLNQ01995 201 aaKnown RBP18.21■□□□□ 0.51
PLOD3-215ENST00000487563 ARL6IP1Q15041 203 aa18.21■□□□□ 0.51
PLOD3-215ENST00000487563 POC5Q8NA72 575 aa18.21■□□□□ 0.51
PLOD3-215ENST00000487563 BVESQ8NE79 360 aa18.21■□□□□ 0.51
PLOD3-215ENST00000487563 ASCL2Q99929 193 aa18.21■□□□□ 0.51
PLOD3-215ENST00000487563 SMAD5-AS1Q9Y6J3 95 aa18.21■□□□□ 0.51
PLOD3-215ENST00000487563 C13orf42A0A1B0GVH6 325 aa18.2■□□□□ 0.5
PLOD3-215ENST00000487563 MRPS14O60783 128 aaKnown RBP18.2■□□□□ 0.5
PLOD3-215ENST00000487563 OR5T1Q8NG75 326 aa18.2■□□□□ 0.5
PLOD3-215ENST00000487563 OR6Q1Q8NGQ2 317 aa18.2■□□□□ 0.5
PLOD3-215ENST00000487563 OR4C12Q96R67 309 aa18.2■□□□□ 0.5
PLOD3-215ENST00000487563 H3BUA1 57 aa18.19■□□□□ 0.5
PLOD3-215ENST00000487563 IGLV2-23P01705 113 aa18.19■□□□□ 0.5
PLOD3-215ENST00000487563 RRASP10301 218 aa18.19■□□□□ 0.5
PLOD3-215ENST00000487563 PJVKQ0ZLH3 352 aa18.19■□□□□ 0.5
PLOD3-215ENST00000487563 ACSM6Q6P461 480 aa18.19■□□□□ 0.5
PLOD3-215ENST00000487563 ADTRPQ96IZ2 230 aa18.19■□□□□ 0.5
PLOD3-215ENST00000487563 RHOVQ96L33 236 aa18.19■□□□□ 0.5
PLOD3-215ENST00000487563 SPNP16150 400 aa18.18■□□□□ 0.5
PLOD3-215ENST00000487563 SRSF7Q16629 238 aaKnown RBP eCLIP18.18■□□□□ 0.5
PLOD3-215ENST00000487563 TMEM177Q53S58 311 aa18.18■□□□□ 0.5
PLOD3-215ENST00000487563 UBE2UQ5VVX9 321 aa18.18■□□□□ 0.5
PLOD3-215ENST00000487563 NR2C2APQ86WQ0 139 aa18.18■□□□□ 0.5
PLOD3-215ENST00000487563 C5orf30Q96GV9 206 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms