RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 LRRC42Q9Y546 428 aa8.1□□□□□ -1.11
SMARCC1-205ENST00000483847 DMRT1Q9Y5R6 373 aa8.1□□□□□ -1.11
SMARCC1-205ENST00000483847 A0A1W2PPK0 400 aa8.09□□□□□ -1.11
SMARCC1-205ENST00000483847 PPP5D1E7EU14 171 aa8.09□□□□□ -1.11
SMARCC1-205ENST00000483847 SPRY2O43597 315 aa8.09□□□□□ -1.11
SMARCC1-205ENST00000483847 RHOGP84095 191 aa8.09□□□□□ -1.11
SMARCC1-205ENST00000483847 ZNF45Q02386 682 aa8.09□□□□□ -1.11
SMARCC1-205ENST00000483847 ZIK1Q3SY52 487 aaPredicted RBP8.09□□□□□ -1.11
SMARCC1-205ENST00000483847 PDPNQ86YL7 162 aa8.09□□□□□ -1.11
SMARCC1-205ENST00000483847 OR52B4Q8NGK2 314 aa8.09□□□□□ -1.11
SMARCC1-205ENST00000483847 SLC7A6OSQ96CW6 309 aaPredicted RBP8.09□□□□□ -1.11
SMARCC1-205ENST00000483847 TMEM68Q96MH6 324 aa8.09□□□□□ -1.11
SMARCC1-205ENST00000483847 MYCBPQ99417 103 aaPredicted RBP8.09□□□□□ -1.11
SMARCC1-205ENST00000483847 KRTAP4-5Q9BYR2 181 aa8.09□□□□□ -1.11
SMARCC1-205ENST00000483847 TECRQ9NZ01 308 aaKnown RBP8.09□□□□□ -1.11
SMARCC1-205ENST00000483847 TP53TG1Q9Y2A0 90 aa8.09□□□□□ -1.11
SMARCC1-205ENST00000483847 AP4S1Q9Y587 144 aa8.09□□□□□ -1.11
SMARCC1-205ENST00000483847 DNAH11Q96DT5 4516 aa8.08□□□□□ -1.12
SMARCC1-205ENST00000483847 MUC4Q99102 2169 aa8.08□□□□□ -1.12
SMARCC1-205ENST00000483847 PKD1P98161 4303 aa8.08□□□□□ -1.12
SMARCC1-205ENST00000483847 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.08□□□□□ -1.12
SMARCC1-205ENST00000483847 TRBV5-5A0A0J9YX44 114 aa8.08□□□□□ -1.12
SMARCC1-205ENST00000483847 SNTNA6NMZ2 147 aa8.08□□□□□ -1.12
SMARCC1-205ENST00000483847 ITGB1BP1O14713 200 aa8.08□□□□□ -1.12
SMARCC1-205ENST00000483847 SCAF4O95104 1147 aaKnown RBP8.08□□□□□ -1.12
SMARCC1-205ENST00000483847 LALBAP00709 142 aa8.08□□□□□ -1.12
SMARCC1-205ENST00000483847 ATF4P18848 351 aaPredicted RBP8.08□□□□□ -1.12
SMARCC1-205ENST00000483847 CBLN1P23435 193 aa8.08□□□□□ -1.12
SMARCC1-205ENST00000483847 BMI1P35226 326 aa8.08□□□□□ -1.12
SMARCC1-205ENST00000483847 DNAL1Q4LDG9 190 aa8.08□□□□□ -1.12
SMARCC1-205ENST00000483847 CCDC58Q4VC31 144 aa8.08□□□□□ -1.12
SMARCC1-205ENST00000483847 OR2G6Q5TZ20 316 aa8.08□□□□□ -1.12
SMARCC1-205ENST00000483847 ZNF880Q6PDB4 577 aa8.08□□□□□ -1.12
SMARCC1-205ENST00000483847 Q6ZWC4 215 aa8.08□□□□□ -1.12
SMARCC1-205ENST00000483847 C6orf201Q7Z4U5 140 aa8.08□□□□□ -1.12
SMARCC1-205ENST00000483847 CCDC197Q8NCU1 140 aa8.08□□□□□ -1.12
SMARCC1-205ENST00000483847 SETD6Q8TBK2 473 aa8.08□□□□□ -1.12
SMARCC1-205ENST00000483847 MLXQ9UH92 298 aa8.08□□□□□ -1.12
SMARCC1-205ENST00000483847 TRBV9A0A0B4J1U6 114 aa8.07□□□□□ -1.12
SMARCC1-205ENST00000483847 A0A1B0GVY2 172 aa8.07□□□□□ -1.12
SMARCC1-205ENST00000483847 FAM223BA6NKX1 122 aa8.07□□□□□ -1.12
SMARCC1-205ENST00000483847 OGG1O15527 345 aa8.07□□□□□ -1.12
SMARCC1-205ENST00000483847 OR2C1O95371 312 aa8.07□□□□□ -1.12
SMARCC1-205ENST00000483847 NAPSAO96009 420 aa8.07□□□□□ -1.12
SMARCC1-205ENST00000483847 APOA2P02652 100 aa8.07□□□□□ -1.12
SMARCC1-205ENST00000483847 ALPLP05186 524 aa8.07□□□□□ -1.12
SMARCC1-205ENST00000483847 OR9G9P0C7N8 305 aa8.07□□□□□ -1.12
SMARCC1-205ENST00000483847 CEACAM6P40199 344 aa8.07□□□□□ -1.12
SMARCC1-205ENST00000483847 ETV1P50549 477 aa8.07□□□□□ -1.12
SMARCC1-205ENST00000483847 RPS11P62280 158 aaKnown RBP eCLIP8.07□□□□□ -1.12
SMARCC1-205ENST00000483847 ATP5G2Q06055 141 aa8.07□□□□□ -1.12
SMARCC1-205ENST00000483847 TM4SF20Q53R12 229 aa8.07□□□□□ -1.12
SMARCC1-205ENST00000483847 OR10K2Q6IF99 312 aa8.07□□□□□ -1.12
SMARCC1-205ENST00000483847 FAM223AQ8IWN6 122 aa8.07□□□□□ -1.12
SMARCC1-205ENST00000483847 SMIM19Q96E16 107 aa8.07□□□□□ -1.12
SMARCC1-205ENST00000483847 CENPNQ96H22 339 aaPredicted RBP8.07□□□□□ -1.12
SMARCC1-205ENST00000483847 PHB2Q99623 299 aa8.07□□□□□ -1.12
SMARCC1-205ENST00000483847 SLC35D1Q9NTN3 355 aa8.07□□□□□ -1.12
SMARCC1-205ENST00000483847 CKLFQ9UBR5 152 aa8.07□□□□□ -1.12
SMARCC1-205ENST00000483847 TRBV5-7A0A0A0MS05 114 aa8.06□□□□□ -1.12
SMARCC1-205ENST00000483847 TMEM213A2RRL7 107 aa8.06□□□□□ -1.12
SMARCC1-205ENST00000483847 SRRM4A7MD48 611 aaKnown RBP8.06□□□□□ -1.12
SMARCC1-205ENST00000483847 M0R1X1 148 aa8.06□□□□□ -1.12
SMARCC1-205ENST00000483847 LGALS9O00182 355 aa8.06□□□□□ -1.12
SMARCC1-205ENST00000483847 TUSC2O75896 110 aa8.06□□□□□ -1.12
SMARCC1-205ENST00000483847 MED14OSP0DP75 135 aa8.06□□□□□ -1.12
SMARCC1-205ENST00000483847 Q499Y3 187 aa8.06□□□□□ -1.12
SMARCC1-205ENST00000483847 ZNF57Q68EA5 555 aaPredicted RBP8.06□□□□□ -1.12
SMARCC1-205ENST00000483847 EDARADDQ8WWZ3 215 aa8.06□□□□□ -1.12
SMARCC1-205ENST00000483847 THRSPQ92748 146 aa8.06□□□□□ -1.12
SMARCC1-205ENST00000483847 RNF183Q96D59 192 aa8.06□□□□□ -1.12
SMARCC1-205ENST00000483847 HARBI1Q96MB7 349 aa8.06□□□□□ -1.12
SMARCC1-205ENST00000483847 NEDD4LQ96PU5 975 aa8.06□□□□□ -1.12
SMARCC1-205ENST00000483847 HDHD3Q9BSH5 251 aaPredicted RBP8.06□□□□□ -1.12
SMARCC1-205ENST00000483847 CHMP1AQ9HD42 196 aaPredicted RBP8.06□□□□□ -1.12
SMARCC1-205ENST00000483847 EI24O14681 340 aa8.05□□□□□ -1.12
SMARCC1-205ENST00000483847 MPPED1O15442 326 aa8.05□□□□□ -1.12
SMARCC1-205ENST00000483847 OR2J3O76001 311 aa8.05□□□□□ -1.12
SMARCC1-205ENST00000483847 FCGR1AP12314 374 aa8.05□□□□□ -1.12
SMARCC1-205ENST00000483847 ZBTB25P24278 435 aa8.05□□□□□ -1.12
SMARCC1-205ENST00000483847 HTR2CP28335 458 aa8.05□□□□□ -1.12
SMARCC1-205ENST00000483847 CAPGP40121 348 aa8.05□□□□□ -1.12
SMARCC1-205ENST00000483847 APOC4P55056 127 aa8.05□□□□□ -1.12
SMARCC1-205ENST00000483847 NANOS2P60321 138 aaKnown RBP8.05□□□□□ -1.12
SMARCC1-205ENST00000483847 TNXAQ16473 311 aa8.05□□□□□ -1.12
SMARCC1-205ENST00000483847 C15orf32Q32M92 178 aa8.05□□□□□ -1.12
SMARCC1-205ENST00000483847 BTNL8Q6UX41 500 aa8.05□□□□□ -1.12
SMARCC1-205ENST00000483847 IDO2Q6ZQW0 420 aa8.05□□□□□ -1.12
SMARCC1-205ENST00000483847 C19orf35Q6ZS72 473 aa8.05□□□□□ -1.12
SMARCC1-205ENST00000483847 ZFP41Q8N8Y5 198 aa8.05□□□□□ -1.12
SMARCC1-205ENST00000483847 UXS1Q8NBZ7 420 aa8.05□□□□□ -1.12
SMARCC1-205ENST00000483847 RHOXF1Q8NHV9 184 aa8.05□□□□□ -1.12
SMARCC1-205ENST00000483847 SRSF12Q8WXF0 261 aaKnown RBP8.05□□□□□ -1.12
SMARCC1-205ENST00000483847 PTX4Q96A99 478 aa8.05□□□□□ -1.12
SMARCC1-205ENST00000483847 NICN1Q9BSH3 213 aa8.05□□□□□ -1.12
SMARCC1-205ENST00000483847 KCNK15Q9H427 330 aa8.05□□□□□ -1.12
SMARCC1-205ENST00000483847 MRPS18AQ9NVS2 196 aaKnown RBP8.05□□□□□ -1.12
SMARCC1-205ENST00000483847 ZNF221Q9UK13 617 aa8.05□□□□□ -1.12
SMARCC1-205ENST00000483847 IGKV1-6A0A0C4DH72 117 aa8.04□□□□□ -1.12
SMARCC1-205ENST00000483847 DYNC1I1O14576 645 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms