RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 ATP6V1G2O95670 118 aa2.36□□□□□ -2.03
SF3B1-210ENST00000482158 LTAP01374 205 aa2.36□□□□□ -2.03
SF3B1-210ENST00000482158 IGKV1D-12P01611 117 aa2.36□□□□□ -2.03
SF3B1-210ENST00000482158 GYPCP04921 128 aa2.36□□□□□ -2.03
SF3B1-210ENST00000482158 ISG15P05161 165 aa2.36□□□□□ -2.03
SF3B1-210ENST00000482158 TFPTP0C1Z6 253 aa2.36□□□□□ -2.03
SF3B1-210ENST00000482158 LIMS3P0CW19 117 aa2.36□□□□□ -2.03
SF3B1-210ENST00000482158 LIMS4P0CW20 117 aa2.36□□□□□ -2.03
SF3B1-210ENST00000482158 INPP1P49441 399 aa2.36□□□□□ -2.03
SF3B1-210ENST00000482158 STC1P52823 247 aa2.36□□□□□ -2.03
SF3B1-210ENST00000482158 CRYBA4P53673 196 aa2.36□□□□□ -2.03
SF3B1-210ENST00000482158 RAB2AP61019 212 aa2.36□□□□□ -2.03
SF3B1-210ENST00000482158 AP1S1P61966 158 aa2.36□□□□□ -2.03
SF3B1-210ENST00000482158 RPL19P84098 196 aaKnown RBP2.36□□□□□ -2.03
SF3B1-210ENST00000482158 TFAMQ00059 246 aaKnown RBP2.36□□□□□ -2.03
SF3B1-210ENST00000482158 SPIN4Q56A73 249 aa2.36□□□□□ -2.03
SF3B1-210ENST00000482158 TRIQKQ629K1 86 aa2.36□□□□□ -2.03
SF3B1-210ENST00000482158 TMEM42Q69YG0 159 aa2.36□□□□□ -2.03
SF3B1-210ENST00000482158 DHRS4L2Q6PKH6 230 aa2.36□□□□□ -2.03
SF3B1-210ENST00000482158 TMED4Q7Z7H5 227 aa2.36□□□□□ -2.03
SF3B1-210ENST00000482158 MUC15Q8N387 334 aa2.36□□□□□ -2.03
SF3B1-210ENST00000482158 NATD1Q8N6N6 113 aa2.36□□□□□ -2.03
SF3B1-210ENST00000482158 OR10X1Q8NGY0 326 aa2.36□□□□□ -2.03
SF3B1-210ENST00000482158 MAFIPQ8WZ33 124 aa2.36□□□□□ -2.03
SF3B1-210ENST00000482158 BORCS5Q969J3 196 aa2.36□□□□□ -2.03
SF3B1-210ENST00000482158 SMIM19Q96E16 107 aa2.36□□□□□ -2.03
SF3B1-210ENST00000482158 KCTD7Q96MP8 289 aa2.36□□□□□ -2.03
SF3B1-210ENST00000482158 GPR22Q99680 433 aa2.36□□□□□ -2.03
SF3B1-210ENST00000482158 OR51B4Q9Y5P0 310 aa2.36□□□□□ -2.03
SF3B1-210ENST00000482158 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
SF3B1-210ENST00000482158 MYH2Q9UKX2 1941 aa2.36□□□□□ -2.03
SF3B1-210ENST00000482158 CHD5Q8TDI0 1954 aa2.36□□□□□ -2.03
SF3B1-210ENST00000482158 ABCC11Q96J66 1382 aa2.36□□□□□ -2.03
SF3B1-210ENST00000482158 SPEF2Q9C093 1822 aa2.35□□□□□ -2.03
SF3B1-210ENST00000482158 PTPRKQ15262 1439 aa2.35□□□□□ -2.03
SF3B1-210ENST00000482158 ERCC6Q03468 1493 aa2.35□□□□□ -2.03
SF3B1-210ENST00000482158 IGHV3OR15-7A0A075B7D8 119 aa2.35□□□□□ -2.03
SF3B1-210ENST00000482158 TINCRA0A1B0GVN0 87 aa2.35□□□□□ -2.03
SF3B1-210ENST00000482158 DISC1C4P0D8 188 aa2.35□□□□□ -2.03
SF3B1-210ENST00000482158 PSMD12O00232 456 aaPredicted RBP2.35□□□□□ -2.03
SF3B1-210ENST00000482158 ARPC5O15511 151 aa2.35□□□□□ -2.03
SF3B1-210ENST00000482158 NOS1APO75052 506 aaPredicted RBP2.35□□□□□ -2.03
SF3B1-210ENST00000482158 CNIH1O95406 144 aa2.35□□□□□ -2.03
SF3B1-210ENST00000482158 KRT75O95678 551 aa2.35□□□□□ -2.03
SF3B1-210ENST00000482158 SNAP29O95721 258 aa2.35□□□□□ -2.03
SF3B1-210ENST00000482158 TYMSP04818 313 aa2.35□□□□□ -2.03
SF3B1-210ENST00000482158 LINC00614P0C842 121 aa2.35□□□□□ -2.03
SF3B1-210ENST00000482158 HIST1H1EP10412 219 aaKnown RBP2.35□□□□□ -2.03
SF3B1-210ENST00000482158 UGT2B7P16662 529 aa2.35□□□□□ -2.03
SF3B1-210ENST00000482158 RPS12P25398 132 aaKnown RBP2.35□□□□□ -2.03
SF3B1-210ENST00000482158 PSMA1P25786 263 aaKnown RBP2.35□□□□□ -2.03
SF3B1-210ENST00000482158 GABRA4P48169 554 aa2.35□□□□□ -2.03
SF3B1-210ENST00000482158 PSPHP78330 225 aa2.35□□□□□ -2.03
SF3B1-210ENST00000482158 APOFQ13790 326 aa2.35□□□□□ -2.03
SF3B1-210ENST00000482158 TBC1D28Q2M2D7 210 aa2.35□□□□□ -2.03
SF3B1-210ENST00000482158 NOXRED1Q6NXP6 359 aa2.35□□□□□ -2.03
SF3B1-210ENST00000482158 NIT1Q86X76 327 aa2.35□□□□□ -2.03
SF3B1-210ENST00000482158 BLIDQ8IZY5 108 aa2.35□□□□□ -2.03
SF3B1-210ENST00000482158 OR6V1Q8N148 313 aa2.35□□□□□ -2.03
SF3B1-210ENST00000482158 RASSF5Q8WWW0 418 aa2.35□□□□□ -2.03
SF3B1-210ENST00000482158 RAB8BQ92930 207 aa2.35□□□□□ -2.03
SF3B1-210ENST00000482158 TESCQ96BS2 214 aa2.35□□□□□ -2.03
SF3B1-210ENST00000482158 DDIT4LQ96D03 193 aa2.35□□□□□ -2.03
SF3B1-210ENST00000482158 DHRS9Q9BPW9 319 aa2.35□□□□□ -2.03
SF3B1-210ENST00000482158 TMEM208Q9BTX3 173 aa2.35□□□□□ -2.03
SF3B1-210ENST00000482158 UGT2B28Q9BY64 529 aa2.35□□□□□ -2.03
SF3B1-210ENST00000482158 ZNF286AQ9HBT8 521 aa2.35□□□□□ -2.03
SF3B1-210ENST00000482158 KCNIP2Q9NS61 270 aa2.35□□□□□ -2.03
SF3B1-210ENST00000482158 SYNMO15061 1565 aa2.35□□□□□ -2.03
SF3B1-210ENST00000482158 WDR7Q9Y4E6 1490 aa2.34□□□□□ -2.03
SF3B1-210ENST00000482158 EFCAB9A8MZ26 197 aa2.34□□□□□ -2.03
SF3B1-210ENST00000482158 PFDN6O15212 129 aa2.34□□□□□ -2.03
SF3B1-210ENST00000482158 SMIM24O75264 130 aa2.34□□□□□ -2.03
SF3B1-210ENST00000482158 IFNA21P01568 189 aa2.34□□□□□ -2.03
SF3B1-210ENST00000482158 PPBPP02775 128 aa2.34□□□□□ -2.03
SF3B1-210ENST00000482158 CST2P09228 141 aa2.34□□□□□ -2.03
SF3B1-210ENST00000482158 ADORA1P30542 326 aa2.34□□□□□ -2.03
SF3B1-210ENST00000482158 SLCO1A2P46721 670 aa2.34□□□□□ -2.03
SF3B1-210ENST00000482158 SKP2Q13309 424 aa2.34□□□□□ -2.03
SF3B1-210ENST00000482158 POU6F1Q14863 301 aa2.34□□□□□ -2.03
SF3B1-210ENST00000482158 SPA17Q15506 151 aa2.34□□□□□ -2.03
SF3B1-210ENST00000482158 MAPK14Q16539 360 aa2.34□□□□□ -2.03
SF3B1-210ENST00000482158 DHFR2Q86XF0 187 aa2.34□□□□□ -2.03
SF3B1-210ENST00000482158 TIPINQ9BVW5 301 aa2.34□□□□□ -2.03
SF3B1-210ENST00000482158 ARMC1Q9NVT9 282 aa2.34□□□□□ -2.03
SF3B1-210ENST00000482158 MRPL16Q9NX20 251 aaKnown RBP2.34□□□□□ -2.03
SF3B1-210ENST00000482158 ALG5Q9Y673 324 aa2.34□□□□□ -2.03
SF3B1-210ENST00000482158 CCDC171Q6TFL3 1326 aa2.34□□□□□ -2.04
SF3B1-210ENST00000482158 COL18A1P39060 1754 aa2.33□□□□□ -2.04
SF3B1-210ENST00000482158 G3V3Q6 166 aa2.33□□□□□ -2.04
SF3B1-210ENST00000482158 M0QZK8 103 aa2.33□□□□□ -2.04
SF3B1-210ENST00000482158 KCNK1O00180 336 aa2.33□□□□□ -2.04
SF3B1-210ENST00000482158 EEF1E1O43324 174 aaKnown RBP2.33□□□□□ -2.04
SF3B1-210ENST00000482158 SYNGR1O43759 233 aa2.33□□□□□ -2.04
SF3B1-210ENST00000482158 SSNA1O43805 119 aa2.33□□□□□ -2.04
SF3B1-210ENST00000482158 DCTN3O75935 186 aa2.33□□□□□ -2.04
SF3B1-210ENST00000482158 CRYZL1O95825 349 aa2.33□□□□□ -2.04
SF3B1-210ENST00000482158 OR12D1P0DN82 309 aa2.33□□□□□ -2.04
SF3B1-210ENST00000482158 AKR1C4P17516 323 aa2.33□□□□□ -2.04
SF3B1-210ENST00000482158 PVALBP20472 110 aaPredicted RBP2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms