RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 TMEM69Q5SWH9 247 aa3.19□□□□□ -1.9
COPA-203ENST00000481040 LDLRAD2Q5SZI1 272 aa3.19□□□□□ -1.9
COPA-203ENST00000481040 C10orf91Q5T1B1 145 aa3.19□□□□□ -1.9
COPA-203ENST00000481040 KRTAP11-1Q8IUC1 163 aa3.19□□□□□ -1.9
COPA-203ENST00000481040 C3orf22Q8N5N4 141 aa3.19□□□□□ -1.9
COPA-203ENST00000481040 ZNF721Q8TF20 911 aa3.19□□□□□ -1.9
COPA-203ENST00000481040 SFRP2Q96HF1 295 aa3.19□□□□□ -1.9
COPA-203ENST00000481040 PRRT1Q99946 306 aa3.19□□□□□ -1.9
COPA-203ENST00000481040 SEC22CQ9BRL7 303 aa3.19□□□□□ -1.9
COPA-203ENST00000481040 SLC23A2Q9UGH3 650 aa3.19□□□□□ -1.9
COPA-203ENST00000481040 DSCAML1Q8TD84 2053 aa3.19□□□□□ -1.9
COPA-203ENST00000481040 RIMBP3CA6NJZ7 1639 aa3.19□□□□□ -1.9
COPA-203ENST00000481040 RIMBP3BA6NNM3 1639 aa3.19□□□□□ -1.9
COPA-203ENST00000481040 RIMBP3Q9UFD9 1639 aa3.19□□□□□ -1.9
COPA-203ENST00000481040 TRBV24-1A0A075B6N3 115 aa3.18□□□□□ -1.9
COPA-203ENST00000481040 IGHV3OR16-8A0A075B7F1 116 aa3.18□□□□□ -1.9
COPA-203ENST00000481040 A0A0B4J2C4 111 aa3.18□□□□□ -1.9
COPA-203ENST00000481040 ZNF878C9JN71 531 aa3.18□□□□□ -1.9
COPA-203ENST00000481040 SH2D1AO60880 128 aa3.18□□□□□ -1.9
COPA-203ENST00000481040 TTRP02766 147 aa3.18□□□□□ -1.9
COPA-203ENST00000481040 FGF6P10767 208 aa3.18□□□□□ -1.9
COPA-203ENST00000481040 ESDP10768 282 aa3.18□□□□□ -1.9
COPA-203ENST00000481040 CRABP2P29373 138 aa3.18□□□□□ -1.9
COPA-203ENST00000481040 HIST1H3AP68431 136 aa3.18□□□□□ -1.9
COPA-203ENST00000481040 BTN3A2P78410 334 aa3.18□□□□□ -1.9
COPA-203ENST00000481040 H3F3AP84243 136 aa3.18□□□□□ -1.9
COPA-203ENST00000481040 PSG4Q00888 419 aa3.18□□□□□ -1.9
COPA-203ENST00000481040 FABP9Q0Z7S8 132 aa3.18□□□□□ -1.9
COPA-203ENST00000481040 SLC9A3R2Q15599 337 aa3.18□□□□□ -1.9
COPA-203ENST00000481040 OR8G1Q15617 311 aa3.18□□□□□ -1.9
COPA-203ENST00000481040 DHRS4L2Q6PKH6 230 aa3.18□□□□□ -1.9
COPA-203ENST00000481040 ZFAND2AQ8N6M9 145 aa3.18□□□□□ -1.9
COPA-203ENST00000481040 OR5P3Q8WZ94 311 aa3.18□□□□□ -1.9
COPA-203ENST00000481040 HIST1H2BAQ96A08 127 aa3.18□□□□□ -1.9
COPA-203ENST00000481040 CPNE2Q96FN4 548 aaPredicted RBP3.18□□□□□ -1.9
COPA-203ENST00000481040 BTF3L4Q96K17 158 aa3.18□□□□□ -1.9
COPA-203ENST00000481040 CCL13Q99616 98 aa3.18□□□□□ -1.9
COPA-203ENST00000481040 FAM96AQ9H5X1 160 aa3.18□□□□□ -1.9
COPA-203ENST00000481040 MRPL27Q9P0M9 148 aaKnown RBP3.18□□□□□ -1.9
COPA-203ENST00000481040 OR5V1Q9UGF6 321 aa3.18□□□□□ -1.9
COPA-203ENST00000481040 COQ4Q9Y3A0 265 aa3.18□□□□□ -1.9
COPA-203ENST00000481040 WRNQ14191 1432 aaPredicted RBP eCLIP3.18□□□□□ -1.9
COPA-203ENST00000481040 SRCAPQ6ZRS2 3230 aa3.17□□□□□ -1.9
COPA-203ENST00000481040 IGLV4-60A0A075B6I1 120 aa3.17□□□□□ -1.9
COPA-203ENST00000481040 TRAV40A0A0B4J280 105 aa3.17□□□□□ -1.9
COPA-203ENST00000481040 OR6C6A6NF89 314 aa3.17□□□□□ -1.9
COPA-203ENST00000481040 H3BQ85 93 aa3.17□□□□□ -1.9
COPA-203ENST00000481040 C15orf65H3BRN8 121 aa3.17□□□□□ -1.9
COPA-203ENST00000481040 LECT2O14960 151 aa3.17□□□□□ -1.9
COPA-203ENST00000481040 OR2B3O76000 313 aa3.17□□□□□ -1.9
COPA-203ENST00000481040 FABP1P07148 127 aa3.17□□□□□ -1.9
COPA-203ENST00000481040 HIST1H1TP22492 207 aaPredicted RBP3.17□□□□□ -1.9
COPA-203ENST00000481040 AKR1C2P52895 323 aa3.17□□□□□ -1.9
COPA-203ENST00000481040 HOXC5Q00444 222 aa3.17□□□□□ -1.9
COPA-203ENST00000481040 RUNX1Q01196 453 aa3.17□□□□□ -1.9
COPA-203ENST00000481040 LCE3CQ5T5A8 94 aa3.17□□□□□ -1.9
COPA-203ENST00000481040 LPCAT3Q6P1A2 487 aa3.17□□□□□ -1.9
COPA-203ENST00000481040 GLT6D1Q7Z4J2 308 aa3.17□□□□□ -1.9
COPA-203ENST00000481040 UMODL1-AS1Q8N2C9 162 aa3.17□□□□□ -1.9
COPA-203ENST00000481040 RPRMLQ8N4K4 120 aa3.17□□□□□ -1.9
COPA-203ENST00000481040 ZNF676Q8N7Q3 588 aa3.17□□□□□ -1.9
COPA-203ENST00000481040 OR4X1Q8NH49 305 aa3.17□□□□□ -1.9
COPA-203ENST00000481040 CD200R1Q8TD46 325 aa3.17□□□□□ -1.9
COPA-203ENST00000481040 GNPNAT1Q96EK6 184 aaPredicted RBP3.17□□□□□ -1.9
COPA-203ENST00000481040 ZNF285Q96NJ3 590 aa3.17□□□□□ -1.9
COPA-203ENST00000481040 CMSS1Q9BQ75 279 aaKnown RBP3.17□□□□□ -1.9
COPA-203ENST00000481040 ULBP3Q9BZM4 244 aa3.17□□□□□ -1.9
COPA-203ENST00000481040 CXorf21Q9HAI6 301 aa3.17□□□□□ -1.9
COPA-203ENST00000481040 NMNAT1Q9HAN9 279 aaPredicted RBP3.17□□□□□ -1.9
COPA-203ENST00000481040 CMTM6Q9NX76 183 aa3.17□□□□□ -1.9
COPA-203ENST00000481040 IDI2-AS1Q9NZ38 188 aa3.17□□□□□ -1.9
COPA-203ENST00000481040 VPREB3Q9UKI3 123 aa3.17□□□□□ -1.9
COPA-203ENST00000481040 U3KQK5 164 aa3.17□□□□□ -1.9
COPA-203ENST00000481040 CC2D2AQ9P2K1 1620 aa3.17□□□□□ -1.9
COPA-203ENST00000481040 DCCP43146 1447 aa3.17□□□□□ -1.9
COPA-203ENST00000481040 ITGB4P16144 1822 aa3.16□□□□□ -1.9
COPA-203ENST00000481040 COL16A1Q07092 1604 aaPredicted RBP3.16□□□□□ -1.9
COPA-203ENST00000481040 IGHV1-69-2A0A0G2JMI3 117 aa3.16□□□□□ -1.9
COPA-203ENST00000481040 COLCA2A8K830 154 aa3.16□□□□□ -1.9
COPA-203ENST00000481040 K7EM74 188 aa3.16□□□□□ -1.9
COPA-203ENST00000481040 IGHMP01871 453 aa3.16□□□□□ -1.9
COPA-203ENST00000481040 CD5P06127 495 aa3.16□□□□□ -1.9
COPA-203ENST00000481040 RBX1P62877 108 aa3.16□□□□□ -1.9
COPA-203ENST00000481040 TNFAIP6P98066 277 aaPredicted RBP3.16□□□□□ -1.9
COPA-203ENST00000481040 KRR1Q13601 381 aaKnown RBP3.16□□□□□ -1.9
COPA-203ENST00000481040 EBI3Q14213 229 aa3.16□□□□□ -1.9
COPA-203ENST00000481040 SNCBQ16143 134 aa3.16□□□□□ -1.9
COPA-203ENST00000481040 KPRPQ5T749 579 aaPredicted RBP3.16□□□□□ -1.9
COPA-203ENST00000481040 Q6ZQT7 251 aa3.16□□□□□ -1.9
COPA-203ENST00000481040 LYG2Q86SG7 212 aa3.16□□□□□ -1.9
COPA-203ENST00000481040 C20orf196Q8IYI0 205 aa3.16□□□□□ -1.9
COPA-203ENST00000481040 BPIFB6Q8NFQ5 453 aa3.16□□□□□ -1.9
COPA-203ENST00000481040 OR2D3Q8NGH3 330 aa3.16□□□□□ -1.9
COPA-203ENST00000481040 BORCS7Q96B45 105 aa3.16□□□□□ -1.9
COPA-203ENST00000481040 STARD4Q96DR4 205 aa3.16□□□□□ -1.9
COPA-203ENST00000481040 LINC00477Q96M19 166 aa3.16□□□□□ -1.9
COPA-203ENST00000481040 KIFC1Q9BW19 673 aa3.16□□□□□ -1.9
COPA-203ENST00000481040 C1QTNF6Q9BXI9 259 aa3.16□□□□□ -1.9
COPA-203ENST00000481040 GID8Q9NWU2 228 aa3.16□□□□□ -1.9
COPA-203ENST00000481040 HHLA2Q9UM44 414 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms