RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 APOA2P02652 100 aa12.55□□□□□ -0.4
COL1A1-204ENST00000474644 MC5RP33032 325 aa12.55□□□□□ -0.4
COL1A1-204ENST00000474644 DUTP33316 252 aaKnown RBP12.55□□□□□ -0.4
COL1A1-204ENST00000474644 THBS3P49746 956 aa12.55□□□□□ -0.4
COL1A1-204ENST00000474644 TSPAN5P62079 268 aa12.55□□□□□ -0.4
COL1A1-204ENST00000474644 MSMO1Q15800 293 aa12.55□□□□□ -0.4
COL1A1-204ENST00000474644 STEAP1BQ6NZ63 245 aa12.55□□□□□ -0.4
COL1A1-204ENST00000474644 Q8N402 240 aa12.55□□□□□ -0.4
COL1A1-204ENST00000474644 ARRDC1Q8N5I2 433 aa12.55□□□□□ -0.4
COL1A1-204ENST00000474644 TRIM63Q969Q1 353 aa12.55□□□□□ -0.4
COL1A1-204ENST00000474644 THAP7Q9BT49 309 aaPredicted RBP12.55□□□□□ -0.4
COL1A1-204ENST00000474644 SRRQ9GZT4 340 aa12.55□□□□□ -0.4
COL1A1-204ENST00000474644 SLC5A7Q9GZV3 580 aa12.55□□□□□ -0.4
COL1A1-204ENST00000474644 ZNF702PQ9H963 129 aa12.55□□□□□ -0.4
COL1A1-204ENST00000474644 TAS2R8Q9NYW2 309 aa12.55□□□□□ -0.4
COL1A1-204ENST00000474644 PTTG2Q9NZH5 202 aa12.55□□□□□ -0.4
COL1A1-204ENST00000474644 ANKRD20A5PA0PJZ0 165 aa12.54□□□□□ -0.4
COL1A1-204ENST00000474644 LINC00473A8K010 186 aa12.54□□□□□ -0.4
COL1A1-204ENST00000474644 H7C2Y5 167 aa12.54□□□□□ -0.4
COL1A1-204ENST00000474644 M0QZK8 103 aa12.54□□□□□ -0.4
COL1A1-204ENST00000474644 FGF16O43320 207 aa12.54□□□□□ -0.4
COL1A1-204ENST00000474644 RAB3DO95716 219 aa12.54□□□□□ -0.4
COL1A1-204ENST00000474644 AMY1AP04745 511 aa12.54□□□□□ -0.4
COL1A1-204ENST00000474644 AMY2AP04746 511 aa12.54□□□□□ -0.4
COL1A1-204ENST00000474644 MDKP21741 143 aaPredicted RBP12.54□□□□□ -0.4
COL1A1-204ENST00000474644 BLCAPP62952 87 aa12.54□□□□□ -0.4
COL1A1-204ENST00000474644 FOXL1Q12952 345 aa12.54□□□□□ -0.4
COL1A1-204ENST00000474644 EIF4EBP1Q13541 118 aaPredicted RBP12.54□□□□□ -0.4
COL1A1-204ENST00000474644 ZNF818PQ6ZRF7 136 aa12.54□□□□□ -0.4
COL1A1-204ENST00000474644 PDPNQ86YL7 162 aa12.54□□□□□ -0.4
COL1A1-204ENST00000474644 C5orf56Q8N8D9 126 aa12.54□□□□□ -0.4
COL1A1-204ENST00000474644 OR8H1Q8NGG4 311 aa12.54□□□□□ -0.4
COL1A1-204ENST00000474644 OR4F5Q8NH21 305 aa12.54□□□□□ -0.4
COL1A1-204ENST00000474644 DDB2Q92466 427 aa12.54□□□□□ -0.4
COL1A1-204ENST00000474644 RITA1Q96K30 269 aa12.54□□□□□ -0.4
COL1A1-204ENST00000474644 C16orf95Q9H693 158 aa12.54□□□□□ -0.4
COL1A1-204ENST00000474644 PLSCR3Q9NRY6 295 aa12.54□□□□□ -0.4
COL1A1-204ENST00000474644 NBEAL1Q6ZS30 2694 aa12.53□□□□□ -0.4
COL1A1-204ENST00000474644 SH2D7A6NKC9 451 aaPredicted RBP12.53□□□□□ -0.4
COL1A1-204ENST00000474644 NCBP2LA6PVI3 153 aaKnown RBP12.53□□□□□ -0.4
COL1A1-204ENST00000474644 IGKV1-16P04430 117 aa12.53□□□□□ -0.4
COL1A1-204ENST00000474644 IFNA6P05013 189 aa12.53□□□□□ -0.4
COL1A1-204ENST00000474644 AKAIN1P0CW23 69 aa12.53□□□□□ -0.4
COL1A1-204ENST00000474644 COMPP49747 757 aaPredicted RBP12.53□□□□□ -0.4
COL1A1-204ENST00000474644 MEF2DQ14814 521 aa12.53□□□□□ -0.4
COL1A1-204ENST00000474644 MMDQ15546 238 aa12.53□□□□□ -0.4
COL1A1-204ENST00000474644 AADACL3Q5VUY0 350 aa12.53□□□□□ -0.4
COL1A1-204ENST00000474644 FAAP20Q6NZ36 180 aa12.53□□□□□ -0.4
COL1A1-204ENST00000474644 C11orf88Q6PI97 169 aa12.53□□□□□ -0.4
COL1A1-204ENST00000474644 KCTD9Q7L273 389 aa12.53□□□□□ -0.4
COL1A1-204ENST00000474644 Q8N2B8 174 aa12.53□□□□□ -0.4
COL1A1-204ENST00000474644 OR4C16Q8NGL9 310 aa12.53□□□□□ -0.4
COL1A1-204ENST00000474644 LINC01006Q8NI28 216 aa12.53□□□□□ -0.4
COL1A1-204ENST00000474644 ADTRPQ96IZ2 230 aa12.53□□□□□ -0.4
COL1A1-204ENST00000474644 SLC35D1Q9NTN3 355 aa12.53□□□□□ -0.4
COL1A1-204ENST00000474644 TNFSF12O43508 249 aa12.52□□□□□ -0.41
COL1A1-204ENST00000474644 ZNF735P0CB33 412 aa12.52□□□□□ -0.41
COL1A1-204ENST00000474644 CNTFRP26992 372 aa12.52□□□□□ -0.41
COL1A1-204ENST00000474644 GNRHRP30968 328 aa12.52□□□□□ -0.41
COL1A1-204ENST00000474644 F2RL1P55085 397 aa12.52□□□□□ -0.41
COL1A1-204ENST00000474644 RPL30P62888 115 aaKnown RBP12.52□□□□□ -0.41
COL1A1-204ENST00000474644 TAGLNQ01995 201 aaKnown RBP12.52□□□□□ -0.41
COL1A1-204ENST00000474644 ABCA11PQ4W5N1 156 aa12.52□□□□□ -0.41
COL1A1-204ENST00000474644 AWAT1Q58HT5 328 aa12.52□□□□□ -0.41
COL1A1-204ENST00000474644 Q6ZS46 218 aa12.52□□□□□ -0.41
COL1A1-204ENST00000474644 LHFPL1Q86WI0 220 aa12.52□□□□□ -0.41
COL1A1-204ENST00000474644 MFSD4AQ8N468 514 aa12.52□□□□□ -0.41
COL1A1-204ENST00000474644 FAM71E2Q8N5Q1 922 aa12.52□□□□□ -0.41
COL1A1-204ENST00000474644 Q8N9W7 124 aa12.52□□□□□ -0.41
COL1A1-204ENST00000474644 ZBTB34Q8NCN2 500 aa12.52□□□□□ -0.41
COL1A1-204ENST00000474644 BVESQ8NE79 360 aa12.52□□□□□ -0.41
COL1A1-204ENST00000474644 BORCS5Q969J3 196 aa12.52□□□□□ -0.41
COL1A1-204ENST00000474644 GPHA2Q96T91 129 aa12.52□□□□□ -0.41
COL1A1-204ENST00000474644 HSD17B10Q99714 261 aaKnown RBP12.52□□□□□ -0.41
COL1A1-204ENST00000474644 PRSS22Q9GZN4 317 aa12.52□□□□□ -0.41
COL1A1-204ENST00000474644 BEX1Q9HBH7 125 aa12.52□□□□□ -0.41
COL1A1-204ENST00000474644 SIGLEC9Q9Y336 463 aa12.52□□□□□ -0.41
COL1A1-204ENST00000474644 MMP24Q9Y5R2 645 aa12.52□□□□□ -0.41
COL1A1-204ENST00000474644 CLPSL1A2RUU4 121 aa12.51□□□□□ -0.41
COL1A1-204ENST00000474644 NBR2O15453 112 aa12.51□□□□□ -0.41
COL1A1-204ENST00000474644 KLF9Q13886 244 aaPredicted RBP12.51□□□□□ -0.41
COL1A1-204ENST00000474644 RTL8BQ17RB0 113 aa12.51□□□□□ -0.41
COL1A1-204ENST00000474644 ZNF66Q6ZN08 573 aa12.51□□□□□ -0.41
COL1A1-204ENST00000474644 LINC00299Q6ZSB3 139 aa12.51□□□□□ -0.41
COL1A1-204ENST00000474644 GDPD1Q8N9F7 314 aa12.51□□□□□ -0.41
COL1A1-204ENST00000474644 OR2T6Q8NHC8 308 aa12.51□□□□□ -0.41
COL1A1-204ENST00000474644 TCTEX1D2Q8WW35 142 aa12.51□□□□□ -0.41
COL1A1-204ENST00000474644 AKIP1Q9NQ31 210 aa12.51□□□□□ -0.41
COL1A1-204ENST00000474644 LIN7CQ9NUP9 197 aaKnown RBP12.51□□□□□ -0.41
COL1A1-204ENST00000474644 A0A1B0GUS0 222 aa12.5□□□□□ -0.41
COL1A1-204ENST00000474644 DISC1C4P0D8 188 aa12.5□□□□□ -0.41
COL1A1-204ENST00000474644 PEX14O75381 377 aa12.5□□□□□ -0.41
COL1A1-204ENST00000474644 NDUFA3O95167 84 aa12.5□□□□□ -0.41
COL1A1-204ENST00000474644 RRASP10301 218 aa12.5□□□□□ -0.41
COL1A1-204ENST00000474644 PPP5CP53041 499 aa12.5□□□□□ -0.41
COL1A1-204ENST00000474644 UCP3P55916 312 aa12.5□□□□□ -0.41
COL1A1-204ENST00000474644 ZNF45Q02386 682 aa12.5□□□□□ -0.41
COL1A1-204ENST00000474644 CBX3Q13185 183 aa12.5□□□□□ -0.41
COL1A1-204ENST00000474644 TMEM95Q3KNT9 176 aa12.5□□□□□ -0.41
COL1A1-204ENST00000474644 SCGB2B2Q4G0G5 96 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms