RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 CCL26Q9Y258 94 aa2.05□□□□□ -2.08
SGCE-210ENST00000472326 URGCP-MRPS24S4R325 110 aa2.05□□□□□ -2.08
SGCE-210ENST00000472326 NOTCH1P46531 2555 aa2.05□□□□□ -2.08
SGCE-210ENST00000472326 F5H5T6 163 aa2.04□□□□□ -2.08
SGCE-210ENST00000472326 KLRC4-KLRK1H3BQV0 150 aa2.04□□□□□ -2.08
SGCE-210ENST00000472326 K7EN84 100 aa2.04□□□□□ -2.08
SGCE-210ENST00000472326 ZNF593O00488 134 aaPredicted RBP2.04□□□□□ -2.08
SGCE-210ENST00000472326 CCL16O15467 120 aa2.04□□□□□ -2.08
SGCE-210ENST00000472326 VAPBO95292 243 aa2.04□□□□□ -2.08
SGCE-210ENST00000472326 MBP02144 154 aa2.04□□□□□ -2.08
SGCE-210ENST00000472326 LCTP09848 1927 aa2.04□□□□□ -2.08
SGCE-210ENST00000472326 OR12D1P0DN82 309 aa2.04□□□□□ -2.08
SGCE-210ENST00000472326 PSMB9P28065 219 aa2.04□□□□□ -2.08
SGCE-210ENST00000472326 ADORA1P30542 326 aa2.04□□□□□ -2.08
SGCE-210ENST00000472326 KCNJ3P48549 501 aa2.04□□□□□ -2.08
SGCE-210ENST00000472326 JMJD1CQ15652 2540 aa2.04□□□□□ -2.08
SGCE-210ENST00000472326 SLC25A25Q6KCM7 469 aa2.04□□□□□ -2.08
SGCE-210ENST00000472326 PDCL2Q8N4E4 241 aa2.04□□□□□ -2.08
SGCE-210ENST00000472326 TSTD1Q8NFU3 115 aa2.04□□□□□ -2.08
SGCE-210ENST00000472326 OR51L1Q8NGJ5 315 aa2.04□□□□□ -2.08
SGCE-210ENST00000472326 PKD1L1Q8TDX9 2849 aa2.04□□□□□ -2.08
SGCE-210ENST00000472326 PDCD6IPQ8WUM4 868 aaKnown RBP2.04□□□□□ -2.08
SGCE-210ENST00000472326 TM6SF2Q9BZW4 377 aa2.04□□□□□ -2.08
SGCE-210ENST00000472326 SLC23A2Q9UGH3 650 aa2.04□□□□□ -2.08
SGCE-210ENST00000472326 GINS2Q9Y248 185 aa2.04□□□□□ -2.08
SGCE-210ENST00000472326 STK38LQ9Y2H1 464 aa2.04□□□□□ -2.08
SGCE-210ENST00000472326 RP1L1Q8IWN7 2480 aaPredicted RBP2.03□□□□□ -2.08
SGCE-210ENST00000472326 CSPG4Q6UVK1 2322 aa2.03□□□□□ -2.08
SGCE-210ENST00000472326 KNTC1P50748 2209 aa2.03□□□□□ -2.08
SGCE-210ENST00000472326 CCDC171Q6TFL3 1326 aa2.03□□□□□ -2.08
SGCE-210ENST00000472326 LOC100506127A0A0U1RQW1 187 aa2.03□□□□□ -2.08
SGCE-210ENST00000472326 H3BP45 60 aa2.03□□□□□ -2.08
SGCE-210ENST00000472326 PSMD11O00231 422 aa2.03□□□□□ -2.08
SGCE-210ENST00000472326 TP53I11O14683 189 aa2.03□□□□□ -2.08
SGCE-210ENST00000472326 KRT7P08729 469 aa2.03□□□□□ -2.08
SGCE-210ENST00000472326 PTNP21246 168 aa2.03□□□□□ -2.08
SGCE-210ENST00000472326 BGNP21810 368 aa2.03□□□□□ -2.08
SGCE-210ENST00000472326 SPAM1P38567 509 aa2.03□□□□□ -2.08
SGCE-210ENST00000472326 CD151P48509 253 aa2.03□□□□□ -2.08
SGCE-210ENST00000472326 XKP51811 444 aa2.03□□□□□ -2.08
SGCE-210ENST00000472326 SNAP25P60880 206 aa2.03□□□□□ -2.08
SGCE-210ENST00000472326 USF2Q15853 346 aaPredicted RBP2.03□□□□□ -2.08
SGCE-210ENST00000472326 Q3ZCU0 254 aa2.03□□□□□ -2.08
SGCE-210ENST00000472326 HES3Q5TGS1 186 aa2.03□□□□□ -2.08
SGCE-210ENST00000472326 DEFB119Q8N690 84 aa2.03□□□□□ -2.08
SGCE-210ENST00000472326 CLHC1Q8NHS4 586 aa2.03□□□□□ -2.08
SGCE-210ENST00000472326 ADTRPQ96IZ2 230 aa2.03□□□□□ -2.08
SGCE-210ENST00000472326 OLFM3Q96PB7 478 aa2.03□□□□□ -2.08
SGCE-210ENST00000472326 SIKE1Q9BRV8 207 aa2.03□□□□□ -2.08
SGCE-210ENST00000472326 OR52A5Q9H2C5 316 aa2.03□□□□□ -2.08
SGCE-210ENST00000472326 MYLKQ15746 1914 aa2.03□□□□□ -2.08
SGCE-210ENST00000472326 TNRC6BQ9UPQ9 1833 aaKnown RBP2.03□□□□□ -2.09
SGCE-210ENST00000472326 CCDC168Q8NDH2 2452 aa2.02□□□□□ -2.09
SGCE-210ENST00000472326 ZNF469Q96JG9 3925 aaPredicted RBP2.02□□□□□ -2.09
SGCE-210ENST00000472326 ABCB11O95342 1321 aa2.02□□□□□ -2.09
SGCE-210ENST00000472326 ZFC3H1O60293 1989 aaKnown RBP2.02□□□□□ -2.09
SGCE-210ENST00000472326 PCDH15Q96QU1 1955 aa2.02□□□□□ -2.09
SGCE-210ENST00000472326 FLNAP21333 2647 aaKnown RBP2.02□□□□□ -2.09
SGCE-210ENST00000472326 IGHV1-45A0A0A0MS14 117 aa2.02□□□□□ -2.09
SGCE-210ENST00000472326 A0A1B0GXF2 115 aa2.02□□□□□ -2.09
SGCE-210ENST00000472326 LECT2O14960 151 aa2.02□□□□□ -2.09
SGCE-210ENST00000472326 ZMPSTE24O75844 475 aa2.02□□□□□ -2.09
SGCE-210ENST00000472326 S1PR2O95136 353 aa2.02□□□□□ -2.09
SGCE-210ENST00000472326 GUSBP08236 651 aa2.02□□□□□ -2.09
SGCE-210ENST00000472326 PSG3Q16557 428 aa2.02□□□□□ -2.09
SGCE-210ENST00000472326 C10orf91Q5T1B1 145 aa2.02□□□□□ -2.09
SGCE-210ENST00000472326 NXNL2Q5VZ03 156 aa2.02□□□□□ -2.09
SGCE-210ENST00000472326 CLEC6AQ6EIG7 209 aa2.02□□□□□ -2.09
SGCE-210ENST00000472326 TMEM25Q86YD3 366 aa2.02□□□□□ -2.09
SGCE-210ENST00000472326 ASCC1Q8N9N2 400 aaKnown RBP2.02□□□□□ -2.09
SGCE-210ENST00000472326 OR4A5Q8NH83 315 aa2.02□□□□□ -2.09
SGCE-210ENST00000472326 BLNKQ8WV28 456 aa2.02□□□□□ -2.09
SGCE-210ENST00000472326 FAM131CQ96AQ9 280 aa2.02□□□□□ -2.09
SGCE-210ENST00000472326 CPB2Q96IY4 423 aa2.02□□□□□ -2.09
SGCE-210ENST00000472326 UTP23Q9BRU9 249 aaKnown RBP2.02□□□□□ -2.09
SGCE-210ENST00000472326 ARL6Q9H0F7 186 aa2.02□□□□□ -2.09
SGCE-210ENST00000472326 SYT4Q9H2B2 425 aa2.02□□□□□ -2.09
SGCE-210ENST00000472326 WDR55Q9H6Y2 383 aaPredicted RBP2.02□□□□□ -2.09
SGCE-210ENST00000472326 COL4A2P08572 1712 aa2.02□□□□□ -2.09
SGCE-210ENST00000472326 NBEAL2Q6ZNJ1 2754 aa2.02□□□□□ -2.09
SGCE-210ENST00000472326 HELZP42694 1942 aaKnown RBP2.01□□□□□ -2.09
SGCE-210ENST00000472326 CEP192Q8TEP8 1941 aa2.01□□□□□ -2.09
SGCE-210ENST00000472326 COL6A5A8TX70 2615 aa2.01□□□□□ -2.09
SGCE-210ENST00000472326 K7ERQ8 282 aa2.01□□□□□ -2.09
SGCE-210ENST00000472326 M0QXV9 152 aa2.01□□□□□ -2.09
SGCE-210ENST00000472326 EEF1E1O43324 174 aaKnown RBP2.01□□□□□ -2.09
SGCE-210ENST00000472326 GMDSO60547 372 aa2.01□□□□□ -2.09
SGCE-210ENST00000472326 MYO1DO94832 1006 aa2.01□□□□□ -2.09
SGCE-210ENST00000472326 CCNOP22674 350 aa2.01□□□□□ -2.09
SGCE-210ENST00000472326 C18orf21Q32NC0 220 aaPredicted RBP2.01□□□□□ -2.09
SGCE-210ENST00000472326 TMEM176BQ3YBM2 270 aaPredicted RBP2.01□□□□□ -2.09
SGCE-210ENST00000472326 ELP2Q6IA86 826 aa2.01□□□□□ -2.09
SGCE-210ENST00000472326 TRIML2Q8N7C3 387 aa2.01□□□□□ -2.09
SGCE-210ENST00000472326 OR11G2Q8NGC1 345 aa2.01□□□□□ -2.09
SGCE-210ENST00000472326 OR6N2Q8NGY6 317 aa2.01□□□□□ -2.09
SGCE-210ENST00000472326 B9D2Q9BPU9 175 aa2.01□□□□□ -2.09
SGCE-210ENST00000472326 AICDAQ9GZX7 198 aa2.01□□□□□ -2.09
SGCE-210ENST00000472326 SLC25A31Q9H0C2 315 aa2.01□□□□□ -2.09
SGCE-210ENST00000472326 ACOT13Q9NPJ3 140 aa2.01□□□□□ -2.09
SGCE-210ENST00000472326 V9GYY9 64 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms