RNA–Protein interactions for RNA: ENST00000469463.1

TPR-204, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 5

Gene TPR, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-204ENST00000469463 DYNC2LI1Q8TCX1 351 aa0.78□□□□□ -2.28
TPR-204ENST00000469463 SLC7A6Q92536 515 aa0.78□□□□□ -2.28
TPR-204ENST00000469463 SFRP2Q96HF1 295 aa0.78□□□□□ -2.28
TPR-204ENST00000469463 OR7D2Q96RA2 312 aa0.78□□□□□ -2.28
TPR-204ENST00000469463 MED10Q9BTT4 135 aa0.78□□□□□ -2.28
TPR-204ENST00000469463 METTL9Q9H1A3 318 aa0.78□□□□□ -2.28
TPR-204ENST00000469463 VCX3BQ9H321 246 aa0.78□□□□□ -2.28
TPR-204ENST00000469463 CHMP5Q9NZZ3 219 aa0.78□□□□□ -2.28
TPR-204ENST00000469463 TIMM9Q9Y5J7 89 aa0.78□□□□□ -2.28
TPR-204ENST00000469463 FREM1Q5H8C1 2179 aa0.78□□□□□ -2.28
TPR-204ENST00000469463 CLUHO75153 1309 aa0.78□□□□□ -2.28
TPR-204ENST00000469463 KDM5BQ9UGL1 1544 aa0.78□□□□□ -2.28
TPR-204ENST00000469463 HELZ2Q9BYK8 2649 aaKnown RBP0.77□□□□□ -2.29
TPR-204ENST00000469463 TRAV8-1A0A0A6YYK1 113 aa0.77□□□□□ -2.29
TPR-204ENST00000469463 BHLHE40O14503 412 aa0.77□□□□□ -2.29
TPR-204ENST00000469463 CREBL2O60519 120 aaPredicted RBP0.77□□□□□ -2.29
TPR-204ENST00000469463 ADAP1O75689 374 aa0.77□□□□□ -2.29
TPR-204ENST00000469463 ATP6V1G2O95670 118 aa0.77□□□□□ -2.29
TPR-204ENST00000469463 GP1BAP07359 652 aa0.77□□□□□ -2.29
TPR-204ENST00000469463 CD24P25063 80 aa0.77□□□□□ -2.29
TPR-204ENST00000469463 AKR1C3P42330 323 aa0.77□□□□□ -2.29
TPR-204ENST00000469463 STC1P52823 247 aa0.77□□□□□ -2.29
TPR-204ENST00000469463 BTN3A2P78410 334 aa0.77□□□□□ -2.29
TPR-204ENST00000469463 SMAGPQ0VAQ4 97 aa0.77□□□□□ -2.29
TPR-204ENST00000469463 TMEM267Q0VDI3 215 aaPredicted RBP0.77□□□□□ -2.29
TPR-204ENST00000469463 ANGPT1Q15389 498 aa0.77□□□□□ -2.29
TPR-204ENST00000469463 SYCP1Q15431 976 aa0.77□□□□□ -2.29
TPR-204ENST00000469463 TMEM42Q69YG0 159 aa0.77□□□□□ -2.29
TPR-204ENST00000469463 SPATA12Q7Z6I5 190 aa0.77□□□□□ -2.29
TPR-204ENST00000469463 RPS19BP1Q86WX3 136 aaKnown RBP0.77□□□□□ -2.29
TPR-204ENST00000469463 TLCD1Q96CP7 247 aa0.77□□□□□ -2.29
TPR-204ENST00000469463 ZNF514Q96K75 400 aaPredicted RBP0.77□□□□□ -2.29
TPR-204ENST00000469463 RETNLBQ9BQ08 111 aa0.77□□□□□ -2.29
TPR-204ENST00000469463 ASCL3Q9NQ33 180 aa0.77□□□□□ -2.29
TPR-204ENST00000469463 UBQLN4Q9NRR5 601 aa0.77□□□□□ -2.29
TPR-204ENST00000469463 CFAP45Q9UL16 551 aa0.77□□□□□ -2.29
TPR-204ENST00000469463 MAP3K19Q56UN5 1328 aa0.77□□□□□ -2.29
TPR-204ENST00000469463 GRIN2BQ13224 1484 aa0.77□□□□□ -2.29
TPR-204ENST00000469463 ADAMTSL1Q8N6G6 1762 aa0.77□□□□□ -2.29
TPR-204ENST00000469463 PTPRBP23467 1997 aa0.77□□□□□ -2.29
TPR-204ENST00000469463 IFNGR2P38484 337 aa0.76□□□□□ -2.29
TPR-204ENST00000469463 GABRA2P47869 451 aa0.76□□□□□ -2.29
TPR-204ENST00000469463 TMEM33P57088 247 aa0.76□□□□□ -2.29
TPR-204ENST00000469463 FXYD7P58549 80 aa0.76□□□□□ -2.29
TPR-204ENST00000469463 HPCAP84074 193 aa0.76□□□□□ -2.29
TPR-204ENST00000469463 EMX1Q04741 257 aaPredicted RBP0.76□□□□□ -2.29
TPR-204ENST00000469463 CDK5R1Q15078 307 aa0.76□□□□□ -2.29
TPR-204ENST00000469463 NNATQ16517 81 aa0.76□□□□□ -2.29
TPR-204ENST00000469463 CLEC12BQ2HXU8 276 aa0.76□□□□□ -2.29
TPR-204ENST00000469463 SLC36A1Q7Z2H8 476 aa0.76□□□□□ -2.29
TPR-204ENST00000469463 KTN1-AS1Q86SY8 53 aa0.76□□□□□ -2.29
TPR-204ENST00000469463 C1orf174Q8IYL3 243 aa0.76□□□□□ -2.29
TPR-204ENST00000469463 SPERTQ8NA61 448 aa0.76□□□□□ -2.29
TPR-204ENST00000469463 SMCR5Q8TEV8 140 aa0.76□□□□□ -2.29
TPR-204ENST00000469463 NMNAT3Q96T66 252 aa0.76□□□□□ -2.29
TPR-204ENST00000469463 HBEGFQ99075 208 aa0.76□□□□□ -2.29
TPR-204ENST00000469463 CYSTM1Q9H1C7 97 aa0.76□□□□□ -2.29
TPR-204ENST00000469463 OR51B6Q9H340 312 aa0.76□□□□□ -2.29
TPR-204ENST00000469463 PARVAQ9NVD7 372 aa0.76□□□□□ -2.29
TPR-204ENST00000469463 HDGFL3Q9Y3E1 203 aa0.76□□□□□ -2.29
TPR-204ENST00000469463 RTTNQ86VV8 2226 aa0.76□□□□□ -2.29
TPR-204ENST00000469463 MICAL3Q7RTP6 2002 aa0.76□□□□□ -2.29
TPR-204ENST00000469463 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
TPR-204ENST00000469463 MALRD1Q5VYJ5 2156 aa0.75□□□□□ -2.29
TPR-204ENST00000469463 MEIKINA0A087WXM9 373 aa0.75□□□□□ -2.29
TPR-204ENST00000469463 HMSDA8MTL9 139 aa0.75□□□□□ -2.29
TPR-204ENST00000469463 ORC5O43913 435 aa0.75□□□□□ -2.29
TPR-204ENST00000469463 NDUFB2O95178 105 aa0.75□□□□□ -2.29
TPR-204ENST00000469463 NPYP01303 97 aa0.75□□□□□ -2.29
TPR-204ENST00000469463 IVLP07476 585 aa0.75□□□□□ -2.29
TPR-204ENST00000469463 ALDH3A1P30838 453 aa0.75□□□□□ -2.29
TPR-204ENST00000469463 KDELR2P33947 212 aa0.75□□□□□ -2.29
TPR-204ENST00000469463 CD79BP40259 229 aa0.75□□□□□ -2.29
TPR-204ENST00000469463 RPL27AP46776 148 aaKnown RBP0.75□□□□□ -2.29
TPR-204ENST00000469463 HOXC5Q00444 222 aa0.75□□□□□ -2.29
TPR-204ENST00000469463 SURF2Q15527 256 aaPredicted RBP0.75□□□□□ -2.29
TPR-204ENST00000469463 LCN8Q6JVE9 175 aa0.75□□□□□ -2.29
TPR-204ENST00000469463 FP248Q71RG6 208 aaPredicted RBP0.75□□□□□ -2.29
TPR-204ENST00000469463 BLIDQ8IZY5 108 aa0.75□□□□□ -2.29
TPR-204ENST00000469463 CLDND2Q8NHS1 167 aa0.75□□□□□ -2.29
TPR-204ENST00000469463 STOML3Q8TAV4 291 aa0.75□□□□□ -2.29
TPR-204ENST00000469463 Q8WTZ3 238 aa0.75□□□□□ -2.29
TPR-204ENST00000469463 MROQ9BYG7 248 aa0.75□□□□□ -2.29
TPR-204ENST00000469463 TTTY13Q9BZ97 58 aa0.75□□□□□ -2.29
TPR-204ENST00000469463 TMEM222Q9H0R3 208 aa0.75□□□□□ -2.29
TPR-204ENST00000469463 EMC3Q9P0I2 261 aa0.75□□□□□ -2.29
TPR-204ENST00000469463 POLR3HQ9Y535 204 aaPredicted RBP0.75□□□□□ -2.29
TPR-204ENST00000469463 MYH11P35749 1972 aa0.75□□□□□ -2.29
TPR-204ENST00000469463 KIAA0232Q92628 1395 aa0.74□□□□□ -2.29
TPR-204ENST00000469463 IGKV2D-26A0A0A0MRZ7 120 aa0.74□□□□□ -2.29
TPR-204ENST00000469463 F8W036 122 aa0.74□□□□□ -2.29
TPR-204ENST00000469463 GOLGA8RI6L899 631 aa0.74□□□□□ -2.29
TPR-204ENST00000469463 M0R381 172 aa0.74□□□□□ -2.29
TPR-204ENST00000469463 HLA-DQB2P05538 268 aa0.74□□□□□ -2.29
TPR-204ENST00000469463 LINC00614P0C842 121 aa0.74□□□□□ -2.29
TPR-204ENST00000469463 RD3LP0DJH9 198 aa0.74□□□□□ -2.29
TPR-204ENST00000469463 GPX2P18283 190 aa0.74□□□□□ -2.29
TPR-204ENST00000469463 CCR7P32248 378 aa0.74□□□□□ -2.29
TPR-204ENST00000469463 KCNJ3P48549 501 aa0.74□□□□□ -2.29
TPR-204ENST00000469463 RBM11P57052 281 aaKnown RBP0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms