RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 RABL2AQ9UBK7 228 aaPredicted RBP16.1■□□□□ 0.17
SKA3-205ENST00000465471 RABL2BQ9UNT1 228 aa16.1■□□□□ 0.17
SKA3-205ENST00000465471 J3QRK9 145 aa16.09■□□□□ 0.17
SKA3-205ENST00000465471 NBR2O15453 112 aa16.09■□□□□ 0.17
SKA3-205ENST00000465471 IGKV1-16P04430 117 aa16.09■□□□□ 0.17
SKA3-205ENST00000465471 HRH1P35367 487 aa16.09■□□□□ 0.17
SKA3-205ENST00000465471 RFX2P48378 723 aa16.09■□□□□ 0.17
SKA3-205ENST00000465471 THBS3P49746 956 aa16.09■□□□□ 0.17
SKA3-205ENST00000465471 TAGLNQ01995 201 aaKnown RBP16.09■□□□□ 0.17
SKA3-205ENST00000465471 FOXB2Q5VYV0 432 aa16.09■□□□□ 0.17
SKA3-205ENST00000465471 OR5H2Q8NGV7 314 aa16.09■□□□□ 0.17
SKA3-205ENST00000465471 DIRAS2Q96HU8 199 aa16.09■□□□□ 0.17
SKA3-205ENST00000465471 ADTRPQ96IZ2 230 aa16.09■□□□□ 0.17
SKA3-205ENST00000465471 SOSTQ9BQB4 213 aa16.09■□□□□ 0.17
SKA3-205ENST00000465471 KLK11Q9UBX7 282 aa16.09■□□□□ 0.17
SKA3-205ENST00000465471 MTFP1Q9UDX5 166 aa16.09■□□□□ 0.17
SKA3-205ENST00000465471 RBMX2Q9Y388 322 aaKnown RBP16.09■□□□□ 0.17
SKA3-205ENST00000465471 DPPA5A6NC42 116 aa16.08■□□□□ 0.16
SKA3-205ENST00000465471 LINC00473A8K010 186 aa16.08■□□□□ 0.16
SKA3-205ENST00000465471 CTDSPLO15194 276 aa16.08■□□□□ 0.16
SKA3-205ENST00000465471 APOA2P02652 100 aa16.08■□□□□ 0.16
SKA3-205ENST00000465471 PMP2P02689 132 aa16.08■□□□□ 0.16
SKA3-205ENST00000465471 HLA-DMAP28067 261 aa16.08■□□□□ 0.16
SKA3-205ENST00000465471 TNFSF8P32971 234 aa16.08■□□□□ 0.16
SKA3-205ENST00000465471 MRPS10P82664 201 aaKnown RBP16.08■□□□□ 0.16
SKA3-205ENST00000465471 PYHIN1Q6K0P9 492 aa16.08■□□□□ 0.16
SKA3-205ENST00000465471 MMP27Q9H306 513 aa16.08■□□□□ 0.16
SKA3-205ENST00000465471 SLC35D1Q9NTN3 355 aa16.08■□□□□ 0.16
SKA3-205ENST00000465471 TRRAPQ9Y4A5 3859 aa16.08■□□□□ 0.16
SKA3-205ENST00000465471 GABARAPH6UMI1 98 aa16.07■□□□□ 0.16
SKA3-205ENST00000465471 H7C2Y5 167 aa16.07■□□□□ 0.16
SKA3-205ENST00000465471 VSIG10L2P0DP72 767 aa16.07■□□□□ 0.16
SKA3-205ENST00000465471 DGCR2P98153 550 aa16.07■□□□□ 0.16
SKA3-205ENST00000465471 C5orf64Q2M2E5 130 aa16.07■□□□□ 0.16
SKA3-205ENST00000465471 ARSJQ5FYB0 599 aaPredicted RBP16.07■□□□□ 0.16
SKA3-205ENST00000465471 C9orf152Q5JTZ5 239 aa16.07■□□□□ 0.16
SKA3-205ENST00000465471 SMIM4Q8WVI0 70 aa16.07■□□□□ 0.16
SKA3-205ENST00000465471 DGCR14Q96DF8 476 aaKnown RBP16.07■□□□□ 0.16
SKA3-205ENST00000465471 RASL11BQ9BPW5 248 aa16.07■□□□□ 0.16
SKA3-205ENST00000465471 HLA-DRB1P01911 266 aa16.06■□□□□ 0.16
SKA3-205ENST00000465471 SSBP1Q04837 148 aaKnown RBP16.06■□□□□ 0.16
SKA3-205ENST00000465471 RNASE12Q5GAN4 147 aaKnown RBP16.06■□□□□ 0.16
SKA3-205ENST00000465471 VAX1Q5SQQ9 334 aa16.06■□□□□ 0.16
SKA3-205ENST00000465471 SECTM1Q8WVN6 248 aa16.06■□□□□ 0.16
SKA3-205ENST00000465471 FCAMRQ8WWV6 532 aa16.06■□□□□ 0.16
SKA3-205ENST00000465471 MOB3AQ96BX8 217 aa16.06■□□□□ 0.16
SKA3-205ENST00000465471 HSPB9Q9BQS6 159 aa16.06■□□□□ 0.16
SKA3-205ENST00000465471 LINC01548A6NM66 108 aa16.05■□□□□ 0.16
SKA3-205ENST00000465471 RRHO14718 337 aa16.05■□□□□ 0.16
SKA3-205ENST00000465471 SPDEFO95238 335 aa16.05■□□□□ 0.16
SKA3-205ENST00000465471 RRASP10301 218 aa16.05■□□□□ 0.16
SKA3-205ENST00000465471 RPL30P62888 115 aaKnown RBP16.05■□□□□ 0.16
SKA3-205ENST00000465471 IL18Q14116 193 aa16.05■□□□□ 0.16
SKA3-205ENST00000465471 TMEM177Q53S58 311 aa16.05■□□□□ 0.16
SKA3-205ENST00000465471 ACTBL2Q562R1 376 aa16.05■□□□□ 0.16
SKA3-205ENST00000465471 SLC35E3Q7Z769 313 aa16.05■□□□□ 0.16
SKA3-205ENST00000465471 ZBTB34Q8NCN2 500 aa16.05■□□□□ 0.16
SKA3-205ENST00000465471 BVESQ8NE79 360 aa16.05■□□□□ 0.16
SKA3-205ENST00000465471 FLYWCH2Q96CP2 140 aaKnown RBP16.05■□□□□ 0.16
SKA3-205ENST00000465471 HSD17B10Q99714 261 aaKnown RBP16.05■□□□□ 0.16
SKA3-205ENST00000465471 ZNF2Q9BSG1 426 aaPredicted RBP16.05■□□□□ 0.16
SKA3-205ENST00000465471 CCL28Q9NRJ3 127 aa16.05■□□□□ 0.16
SKA3-205ENST00000465471 KIAA1456Q9P272 454 aa16.05■□□□□ 0.16
SKA3-205ENST00000465471 ZNF107Q9UII5 783 aaPredicted RBP16.05■□□□□ 0.16
SKA3-205ENST00000465471 ZNF580Q9UK33 172 aa16.05■□□□□ 0.16
SKA3-205ENST00000465471 KCNAB3O43448 404 aa16.04■□□□□ 0.16
SKA3-205ENST00000465471 IGLV2-23P01705 113 aa16.04■□□□□ 0.16
SKA3-205ENST00000465471 TBPP20226 339 aa16.04■□□□□ 0.16
SKA3-205ENST00000465471 FXYD4P59646 89 aa16.04■□□□□ 0.16
SKA3-205ENST00000465471 PSG5Q15238 335 aa16.04■□□□□ 0.16
SKA3-205ENST00000465471 ZNF66Q6ZN08 573 aa16.04■□□□□ 0.16
SKA3-205ENST00000465471 TSNAXQ99598 290 aaKnown RBP16.04■□□□□ 0.16
SKA3-205ENST00000465471 SLC5A7Q9GZV3 580 aa16.04■□□□□ 0.16
SKA3-205ENST00000465471 FXYD6Q9H0Q3 95 aa16.04■□□□□ 0.16
SKA3-205ENST00000465471 GSTZ1O43708 216 aaPredicted RBP16.03■□□□□ 0.16
SKA3-205ENST00000465471 PEX14O75381 377 aa16.03■□□□□ 0.16
SKA3-205ENST00000465471 CD74P04233 296 aa16.03■□□□□ 0.16
SKA3-205ENST00000465471 GNRHRP30968 328 aa16.03■□□□□ 0.16
SKA3-205ENST00000465471 HERV-K104P61576 105 aa16.03■□□□□ 0.16
SKA3-205ENST00000465471 RTL8BQ17RB0 113 aa16.03■□□□□ 0.16
SKA3-205ENST00000465471 ZNF818PQ6ZRF7 136 aa16.03■□□□□ 0.16
SKA3-205ENST00000465471 KCTD9Q7L273 389 aa16.03■□□□□ 0.16
SKA3-205ENST00000465471 TMEM17Q86X19 198 aa16.03■□□□□ 0.16
SKA3-205ENST00000465471 TMEM229BQ8NBD8 167 aa16.03■□□□□ 0.16
SKA3-205ENST00000465471 OR6F1Q8NGZ6 308 aa16.03■□□□□ 0.16
SKA3-205ENST00000465471 FBXL15Q9H469 300 aa16.03■□□□□ 0.16
SKA3-205ENST00000465471 V9GYH0 126 aa16.03■□□□□ 0.16
SKA3-205ENST00000465471 IGHV7-81A0A0B4J1V7 117 aa16.02■□□□□ 0.16
SKA3-205ENST00000465471 M0QYG6 137 aa16.02■□□□□ 0.16
SKA3-205ENST00000465471 AP4M1O00189 453 aa16.02■□□□□ 0.16
SKA3-205ENST00000465471 CD3DP04234 171 aa16.02■□□□□ 0.16
SKA3-205ENST00000465471 IGF1P05019 195 aa16.02■□□□□ 0.16
SKA3-205ENST00000465471 LGALS7P47929 136 aa16.02■□□□□ 0.16
SKA3-205ENST00000465471 BRWD1-AS2P59051 145 aa16.02■□□□□ 0.16
SKA3-205ENST00000465471 RPS16P62249 146 aaKnown RBP16.02■□□□□ 0.16
SKA3-205ENST00000465471 LIN54Q6MZP7 749 aa16.02■□□□□ 0.16
SKA3-205ENST00000465471 CCDC190Q86UF4 302 aa16.02■□□□□ 0.16
SKA3-205ENST00000465471 FOXRED2Q8IWF2 684 aa16.02■□□□□ 0.16
SKA3-205ENST00000465471 STPG2Q8N412 459 aa16.02■□□□□ 0.16
SKA3-205ENST00000465471 MFSD4AQ8N468 514 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms