RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 CENPVQ7Z7K6 275 aaPredicted RBP13.93□□□□□ -0.18
VPS52-214ENST00000463486 ZNF645Q8N7E2 425 aa13.93□□□□□ -0.18
VPS52-214ENST00000463486 GIMAP1Q8WWP7 306 aa13.93□□□□□ -0.18
VPS52-214ENST00000463486 ABHD1Q96SE0 405 aa13.93□□□□□ -0.18
VPS52-214ENST00000463486 SCPEP1Q9HB40 452 aa13.93□□□□□ -0.18
VPS52-214ENST00000463486 TET2Q6N021 2002 aaPredicted RBP13.92□□□□□ -0.18
VPS52-214ENST00000463486 H7C2Y5 167 aa13.92□□□□□ -0.18
VPS52-214ENST00000463486 M0QZ24 198 aa13.92□□□□□ -0.18
VPS52-214ENST00000463486 FCN1O00602 326 aa13.92□□□□□ -0.18
VPS52-214ENST00000463486 RRHO14718 337 aa13.92□□□□□ -0.18
VPS52-214ENST00000463486 TPPPO94811 219 aa13.92□□□□□ -0.18
VPS52-214ENST00000463486 TSPAN15O95858 294 aa13.92□□□□□ -0.18
VPS52-214ENST00000463486 IGLV2-23P01705 113 aa13.92□□□□□ -0.18
VPS52-214ENST00000463486 IGF1P05019 195 aa13.92□□□□□ -0.18
VPS52-214ENST00000463486 SOX6P35712 828 aa13.92□□□□□ -0.18
VPS52-214ENST00000463486 BRWD1-AS2P59051 145 aa13.92□□□□□ -0.18
VPS52-214ENST00000463486 RPL30P62888 115 aaKnown RBP13.92□□□□□ -0.18
VPS52-214ENST00000463486 CFHR3Q02985 330 aa13.92□□□□□ -0.18
VPS52-214ENST00000463486 CDK10Q15131 360 aa13.92□□□□□ -0.18
VPS52-214ENST00000463486 PSG5Q15238 335 aa13.92□□□□□ -0.18
VPS52-214ENST00000463486 DHRS11Q6UWP2 260 aa13.92□□□□□ -0.18
VPS52-214ENST00000463486 PDPNQ86YL7 162 aa13.92□□□□□ -0.18
VPS52-214ENST00000463486 SNX29P2Q8IUI4 249 aa13.92□□□□□ -0.18
VPS52-214ENST00000463486 LAX1Q8IWV1 398 aa13.92□□□□□ -0.18
VPS52-214ENST00000463486 STPG2Q8N412 459 aa13.92□□□□□ -0.18
VPS52-214ENST00000463486 FBXL15Q9H469 300 aa13.92□□□□□ -0.18
VPS52-214ENST00000463486 NECAP2Q9NVZ3 263 aa13.92□□□□□ -0.18
VPS52-214ENST00000463486 ZNF580Q9UK33 172 aa13.92□□□□□ -0.18
VPS52-214ENST00000463486 RBMX2Q9Y388 322 aaKnown RBP13.92□□□□□ -0.18
VPS52-214ENST00000463486 RBM7Q9Y580 266 aaKnown RBP13.92□□□□□ -0.18
VPS52-214ENST00000463486 IGHV7-81A0A0B4J1V7 117 aa13.91□□□□□ -0.18
VPS52-214ENST00000463486 SRRM4A7MD48 611 aaKnown RBP13.91□□□□□ -0.18
VPS52-214ENST00000463486 PEX14O75381 377 aa13.91□□□□□ -0.18
VPS52-214ENST00000463486 PPYP01298 95 aa13.91□□□□□ -0.18
VPS52-214ENST00000463486 CRYGBP07316 175 aa13.91□□□□□ -0.18
VPS52-214ENST00000463486 RFX2P48378 723 aa13.91□□□□□ -0.18
VPS52-214ENST00000463486 THBS3P49746 956 aa13.91□□□□□ -0.18
VPS52-214ENST00000463486 DYRK1AQ13627 763 aa13.91□□□□□ -0.18
VPS52-214ENST00000463486 TMEM177Q53S58 311 aa13.91□□□□□ -0.18
VPS52-214ENST00000463486 LIN54Q6MZP7 749 aa13.91□□□□□ -0.18
VPS52-214ENST00000463486 TREML4Q6UXN2 200 aa13.91□□□□□ -0.18
VPS52-214ENST00000463486 ZNF329Q86UD4 541 aa13.91□□□□□ -0.18
VPS52-214ENST00000463486 CHPT1Q8WUD6 406 aa13.91□□□□□ -0.18
VPS52-214ENST00000463486 NXF2Q9GZY0 626 aaKnown RBP13.91□□□□□ -0.18
VPS52-214ENST00000463486 IFT46Q9NQC8 304 aa13.91□□□□□ -0.18
VPS52-214ENST00000463486 SLC35D1Q9NTN3 355 aa13.91□□□□□ -0.18
VPS52-214ENST00000463486 EXTL2Q9UBQ6 330 aa13.91□□□□□ -0.18
VPS52-214ENST00000463486 PSMB11A5LHX3 300 aa13.9□□□□□ -0.18
VPS52-214ENST00000463486 FAM25AB3EWG3 89 aa13.9□□□□□ -0.18
VPS52-214ENST00000463486 FAM25CB3EWG5 89 aa13.9□□□□□ -0.18
VPS52-214ENST00000463486 FAM25GB3EWG6 89 aa13.9□□□□□ -0.18
VPS52-214ENST00000463486 AP4M1O00189 453 aa13.9□□□□□ -0.18
VPS52-214ENST00000463486 SULT1C2O00338 296 aa13.9□□□□□ -0.18
VPS52-214ENST00000463486 SLC22A5O76082 557 aa13.9□□□□□ -0.18
VPS52-214ENST00000463486 NDPQ00604 133 aa13.9□□□□□ -0.18
VPS52-214ENST00000463486 TAGLNQ01995 201 aaKnown RBP13.9□□□□□ -0.18
VPS52-214ENST00000463486 MRGPRG-AS1Q2M3A8 158 aa13.9□□□□□ -0.18
VPS52-214ENST00000463486 BVESQ8NE79 360 aa13.9□□□□□ -0.18
VPS52-214ENST00000463486 FLYWCH2Q96CP2 140 aaKnown RBP13.9□□□□□ -0.18
VPS52-214ENST00000463486 CCL28Q9NRJ3 127 aa13.9□□□□□ -0.18
VPS52-214ENST00000463486 KCNAB3O43448 404 aa13.89□□□□□ -0.19
VPS52-214ENST00000463486 APOA2P02652 100 aa13.89□□□□□ -0.19
VPS52-214ENST00000463486 PMP2P02689 132 aa13.89□□□□□ -0.19
VPS52-214ENST00000463486 EGR2P11161 476 aaPredicted RBP13.89□□□□□ -0.19
VPS52-214ENST00000463486 RPS16P62249 146 aaKnown RBP13.89□□□□□ -0.19
VPS52-214ENST00000463486 SSBP2P81877 361 aaPredicted RBP13.89□□□□□ -0.19
VPS52-214ENST00000463486 MSMO1Q15800 293 aa13.89□□□□□ -0.19
VPS52-214ENST00000463486 C19orf54Q5BKX5 351 aa13.89□□□□□ -0.19
VPS52-214ENST00000463486 NDUFA11Q86Y39 141 aa13.89□□□□□ -0.19
VPS52-214ENST00000463486 FOXRED2Q8IWF2 684 aa13.89□□□□□ -0.19
VPS52-214ENST00000463486 ADTRPQ96IZ2 230 aa13.89□□□□□ -0.19
VPS52-214ENST00000463486 GPHA2Q96T91 129 aa13.89□□□□□ -0.19
VPS52-214ENST00000463486 OR51J1Q9H342 316 aa13.89□□□□□ -0.19
VPS52-214ENST00000463486 TPSG1Q9NRR2 321 aa13.89□□□□□ -0.19
VPS52-214ENST00000463486 FBXO7Q9Y3I1 522 aa13.89□□□□□ -0.19
VPS52-214ENST00000463486 SPDEFO95238 335 aa13.88□□□□□ -0.19
VPS52-214ENST00000463486 HLA-DMAP28067 261 aa13.88□□□□□ -0.19
VPS52-214ENST00000463486 PPIFP30405 207 aaKnown RBP13.88□□□□□ -0.19
VPS52-214ENST00000463486 HRH1P35367 487 aa13.88□□□□□ -0.19
VPS52-214ENST00000463486 LGALS7P47929 136 aa13.88□□□□□ -0.19
VPS52-214ENST00000463486 CX3CL1P78423 397 aa13.88□□□□□ -0.19
VPS52-214ENST00000463486 C2orf68Q2NKX9 166 aa13.88□□□□□ -0.19
VPS52-214ENST00000463486 OR52I2Q8NH67 350 aa13.88□□□□□ -0.19
VPS52-214ENST00000463486 TSNAXQ99598 290 aaKnown RBP13.88□□□□□ -0.19
VPS52-214ENST00000463486 SOSTQ9BQB4 213 aa13.88□□□□□ -0.19
VPS52-214ENST00000463486 EHFQ9NZC4 300 aa13.88□□□□□ -0.19
VPS52-214ENST00000463486 KIAA1456Q9P272 454 aa13.88□□□□□ -0.19
VPS52-214ENST00000463486 KLK11Q9UBX7 282 aa13.88□□□□□ -0.19
VPS52-214ENST00000463486 NOTCH3Q9UM47 2321 aa13.87□□□□□ -0.19
VPS52-214ENST00000463486 TNCP24821 2201 aa13.87□□□□□ -0.19
VPS52-214ENST00000463486 ZNF701M0R085 212 aaPredicted RBP13.87□□□□□ -0.19
VPS52-214ENST00000463486 RGS5O15539 181 aa13.87□□□□□ -0.19
VPS52-214ENST00000463486 CSF1P09603 554 aa13.87□□□□□ -0.19
VPS52-214ENST00000463486 GNRHRP30968 328 aa13.87□□□□□ -0.19
VPS52-214ENST00000463486 CRIP2P52943 208 aaPredicted RBP13.87□□□□□ -0.19
VPS52-214ENST00000463486 TAS2R46P59540 309 aa13.87□□□□□ -0.19
VPS52-214ENST00000463486 MFSD4AQ8N468 514 aa13.87□□□□□ -0.19
VPS52-214ENST00000463486 RNF152Q8N8N0 203 aa13.87□□□□□ -0.19
VPS52-214ENST00000463486 SECTM1Q8WVN6 248 aa13.87□□□□□ -0.19
VPS52-214ENST00000463486 MMP27Q9H306 513 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms