RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 FCGR3BO75015 233 aa10.56□□□□□ -0.72
VAPB-203ENST00000463370 LYNX1P0DP58 116 aa10.56□□□□□ -0.72
VAPB-203ENST00000463370 GNG10P50151 68 aa10.56□□□□□ -0.72
VAPB-203ENST00000463370 Q6ZRG5 221 aa10.56□□□□□ -0.72
VAPB-203ENST00000463370 HAPLN4Q86UW8 402 aa10.56□□□□□ -0.72
VAPB-203ENST00000463370 ABHD14AQ9BUJ0 271 aa10.56□□□□□ -0.72
VAPB-203ENST00000463370 SLC25A10Q9UBX3 287 aaPredicted RBP10.56□□□□□ -0.72
VAPB-203ENST00000463370 TRAV38-1A0A0B4J264 116 aa10.55□□□□□ -0.72
VAPB-203ENST00000463370 PIGBOS1A0A0B4J2F0 54 aa10.55□□□□□ -0.72
VAPB-203ENST00000463370 VSTM5A8MXK1 200 aa10.55□□□□□ -0.72
VAPB-203ENST00000463370 KRBOX1C9JBD0 128 aa10.55□□□□□ -0.72
VAPB-203ENST00000463370 TOR1AO14656 332 aa10.55□□□□□ -0.72
VAPB-203ENST00000463370 TNFRSF13BO14836 293 aaPredicted RBP10.55□□□□□ -0.72
VAPB-203ENST00000463370 AGPAT2O15120 278 aa10.55□□□□□ -0.72
VAPB-203ENST00000463370 SEC11BP0C7V7 166 aa10.55□□□□□ -0.72
VAPB-203ENST00000463370 METTL15P1P0C7V9 234 aa10.55□□□□□ -0.72
VAPB-203ENST00000463370 ATP6V0CP27449 155 aa10.55□□□□□ -0.72
VAPB-203ENST00000463370 UBE2KP61086 200 aa10.55□□□□□ -0.72
VAPB-203ENST00000463370 RUNX1Q01196 453 aa10.55□□□□□ -0.72
VAPB-203ENST00000463370 SPINK9Q5DT21 86 aa10.55□□□□□ -0.72
VAPB-203ENST00000463370 VKORC1L1Q8N0U8 176 aa10.55□□□□□ -0.72
VAPB-203ENST00000463370 ZNF439Q8NDP4 499 aa10.55□□□□□ -0.72
VAPB-203ENST00000463370 SAT2Q96F10 170 aaPredicted RBP10.55□□□□□ -0.72
VAPB-203ENST00000463370 RAB40CQ96S21 281 aa10.55□□□□□ -0.72
VAPB-203ENST00000463370 RBKSQ9H477 322 aa10.55□□□□□ -0.72
VAPB-203ENST00000463370 CTSZQ9UBR2 303 aa10.55□□□□□ -0.72
VAPB-203ENST00000463370 WSB1Q9Y6I7 421 aa10.55□□□□□ -0.72
VAPB-203ENST00000463370 SAA2-SAA4A0A096LPE2 208 aa10.55□□□□□ -0.72
VAPB-203ENST00000463370 MARCH11A6NNE9 402 aa10.55□□□□□ -0.72
VAPB-203ENST00000463370 DANCRP0C864 163 aa10.55□□□□□ -0.72
VAPB-203ENST00000463370 SAA2P0DJI9 122 aaPredicted RBP10.55□□□□□ -0.72
VAPB-203ENST00000463370 CCL3L1P16619 93 aa10.55□□□□□ -0.72
VAPB-203ENST00000463370 LOXP28300 417 aaPredicted RBP10.55□□□□□ -0.72
VAPB-203ENST00000463370 TNFRSF9Q07011 255 aa10.55□□□□□ -0.72
VAPB-203ENST00000463370 TFF3Q07654 80 aa10.55□□□□□ -0.72
VAPB-203ENST00000463370 BAXQ07812 192 aa10.55□□□□□ -0.72
VAPB-203ENST00000463370 EFNB3Q15768 340 aa10.55□□□□□ -0.72
VAPB-203ENST00000463370 BTNL8Q6UX41 500 aa10.55□□□□□ -0.72
VAPB-203ENST00000463370 TMEM182Q6ZP80 229 aaPredicted RBP10.55□□□□□ -0.72
VAPB-203ENST00000463370 ZDHHC16Q969W1 377 aa10.55□□□□□ -0.72
VAPB-203ENST00000463370 NARS2Q96I59 477 aaKnown RBP10.55□□□□□ -0.72
VAPB-203ENST00000463370 ZNF251Q9BRH9 671 aa10.55□□□□□ -0.72
VAPB-203ENST00000463370 MMP26Q9NRE1 261 aa10.55□□□□□ -0.72
VAPB-203ENST00000463370 COA4Q9NYJ1 87 aa10.55□□□□□ -0.72
VAPB-203ENST00000463370 PSENENQ9NZ42 101 aa10.55□□□□□ -0.72
VAPB-203ENST00000463370 FAM96BQ9Y3D0 163 aa10.55□□□□□ -0.72
VAPB-203ENST00000463370 DIDO1Q9BTC0 2240 aaKnown RBP10.55□□□□□ -0.72
VAPB-203ENST00000463370 RAB19A4D1S5 217 aa10.54□□□□□ -0.72
VAPB-203ENST00000463370 NKX6-3A6NJ46 265 aa10.54□□□□□ -0.72
VAPB-203ENST00000463370 B9A039 149 aa10.54□□□□□ -0.72
VAPB-203ENST00000463370 SULT1A1P50225 295 aa10.54□□□□□ -0.72
VAPB-203ENST00000463370 RPL23AP62750 156 aaKnown RBP10.54□□□□□ -0.72
VAPB-203ENST00000463370 SSX9Q7RTT3 188 aa10.54□□□□□ -0.72
VAPB-203ENST00000463370 CORO2AQ92828 525 aa10.54□□□□□ -0.72
VAPB-203ENST00000463370 MS4A5Q9H3V2 200 aa10.54□□□□□ -0.72
VAPB-203ENST00000463370 LINC00574Q9H8X3 128 aa10.54□□□□□ -0.72
VAPB-203ENST00000463370 FAM212BQ9NTI7 297 aaPredicted RBP10.54□□□□□ -0.72
VAPB-203ENST00000463370 IDI2-AS1Q9NZ38 188 aa10.54□□□□□ -0.72
VAPB-203ENST00000463370 HSPB7Q9UBY9 170 aa10.54□□□□□ -0.72
VAPB-203ENST00000463370 OR9G9P0C7N8 305 aa10.54□□□□□ -0.72
VAPB-203ENST00000463370 ADCYAP1P18509 176 aa10.54□□□□□ -0.72
VAPB-203ENST00000463370 RPL31P62899 125 aaKnown RBP10.54□□□□□ -0.72
VAPB-203ENST00000463370 SPANXN5Q5MJ07 72 aa10.54□□□□□ -0.72
VAPB-203ENST00000463370 C1orf87Q8N0U7 546 aa10.54□□□□□ -0.72
VAPB-203ENST00000463370 MUC15Q8N387 334 aa10.54□□□□□ -0.72
VAPB-203ENST00000463370 R3HDM4Q96D70 268 aa10.54□□□□□ -0.72
VAPB-203ENST00000463370 PARP11Q9NR21 331 aa10.54□□□□□ -0.72
VAPB-203ENST00000463370 CACFD1Q9UGQ2 172 aa10.54□□□□□ -0.72
VAPB-203ENST00000463370 IGHV1-69-2A0A0G2JMI3 117 aa10.53□□□□□ -0.72
VAPB-203ENST00000463370 ZNF729A6NN14 1252 aaPredicted RBP10.53□□□□□ -0.72
VAPB-203ENST00000463370 CRYZL1O95825 349 aa10.53□□□□□ -0.72
VAPB-203ENST00000463370 OR2B8PP59922 312 aa10.53□□□□□ -0.72
VAPB-203ENST00000463370 PJVKQ0ZLH3 352 aa10.53□□□□□ -0.72
VAPB-203ENST00000463370 ZNF266Q14584 549 aa10.53□□□□□ -0.72
VAPB-203ENST00000463370 ZNF672Q499Z4 452 aaPredicted RBP10.53□□□□□ -0.72
VAPB-203ENST00000463370 TMEM200BQ69YZ2 307 aa10.53□□□□□ -0.72
VAPB-203ENST00000463370 ATRAIDQ6UW56 229 aa10.53□□□□□ -0.72
VAPB-203ENST00000463370 H2BFWTQ7Z2G1 175 aa10.53□□□□□ -0.72
VAPB-203ENST00000463370 STX12Q86Y82 276 aa10.53□□□□□ -0.72
VAPB-203ENST00000463370 LYG1Q8N1E2 194 aa10.53□□□□□ -0.72
VAPB-203ENST00000463370 DDB2Q92466 427 aa10.53□□□□□ -0.72
VAPB-203ENST00000463370 ATP5SQ99766 215 aa10.53□□□□□ -0.72
VAPB-203ENST00000463370 CFAP46Q8IYW2 2715 aa10.53□□□□□ -0.72
VAPB-203ENST00000463370 SVEP1Q4LDE5 3571 aa10.53□□□□□ -0.72
VAPB-203ENST00000463370 hADV38S2A0JD32 116 aa10.53□□□□□ -0.72
VAPB-203ENST00000463370 ZG16O60844 167 aa10.53□□□□□ -0.72
VAPB-203ENST00000463370 APOC3P02656 99 aa10.53□□□□□ -0.72
VAPB-203ENST00000463370 RPS16P62249 146 aaKnown RBP10.53□□□□□ -0.72
VAPB-203ENST00000463370 TCTEX1D1Q8N7M0 179 aa10.53□□□□□ -0.72
VAPB-203ENST00000463370 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.53□□□□□ -0.72
VAPB-203ENST00000463370 RPUSD1Q9UJJ7 312 aaKnown RBP10.53□□□□□ -0.72
VAPB-203ENST00000463370 RALYQ9UKM9 306 aaKnown RBP10.53□□□□□ -0.72
VAPB-203ENST00000463370 LINC00312Q9Y6C7 94 aa10.53□□□□□ -0.72
VAPB-203ENST00000463370 DVL1O14640 695 aa10.52□□□□□ -0.73
VAPB-203ENST00000463370 RAB29O14966 203 aa10.52□□□□□ -0.73
VAPB-203ENST00000463370 COL8A2P25067 703 aa10.52□□□□□ -0.73
VAPB-203ENST00000463370 UQCRFS1P47985 274 aa10.52□□□□□ -0.73
VAPB-203ENST00000463370 ZNF616Q08AN1 781 aa10.52□□□□□ -0.73
VAPB-203ENST00000463370 ZNF383Q8NA42 475 aa10.52□□□□□ -0.73
VAPB-203ENST00000463370 OR2G3Q8NGZ4 309 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms