RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 MMDQ15546 238 aa5.12□□□□□ -1.59
SF3B1-206ENST00000462613 ABCA11PQ4W5N1 156 aa5.12□□□□□ -1.59
SF3B1-206ENST00000462613 RPL39P5Q59GN2 51 aa5.12□□□□□ -1.59
SF3B1-206ENST00000462613 C9orf152Q5JTZ5 239 aa5.12□□□□□ -1.59
SF3B1-206ENST00000462613 VAX1Q5SQQ9 334 aa5.12□□□□□ -1.59
SF3B1-206ENST00000462613 UTF1Q5T230 341 aa5.12□□□□□ -1.59
SF3B1-206ENST00000462613 ZNF57Q68EA5 555 aaPredicted RBP5.12□□□□□ -1.59
SF3B1-206ENST00000462613 FAM53AQ6NSI3 398 aaPredicted RBP5.12□□□□□ -1.59
SF3B1-206ENST00000462613 DHRS11Q6UWP2 260 aa5.12□□□□□ -1.59
SF3B1-206ENST00000462613 ZNF66Q6ZN08 573 aa5.12□□□□□ -1.59
SF3B1-206ENST00000462613 KCTD9Q7L273 389 aa5.12□□□□□ -1.59
SF3B1-206ENST00000462613 FOXRED2Q8IWF2 684 aa5.12□□□□□ -1.59
SF3B1-206ENST00000462613 ODF3L1Q8IXM7 274 aa5.12□□□□□ -1.59
SF3B1-206ENST00000462613 SLC38A6Q8IZM9 456 aa5.12□□□□□ -1.59
SF3B1-206ENST00000462613 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.12□□□□□ -1.59
SF3B1-206ENST00000462613 GDPD1Q8N9F7 314 aa5.12□□□□□ -1.59
SF3B1-206ENST00000462613 CCDC71LQ8N9Z2 235 aa5.12□□□□□ -1.59
SF3B1-206ENST00000462613 OR4S2Q8NH73 311 aa5.12□□□□□ -1.59
SF3B1-206ENST00000462613 ZFAND1Q8TCF1 268 aa5.12□□□□□ -1.59
SF3B1-206ENST00000462613 TCTEX1D2Q8WW35 142 aa5.12□□□□□ -1.59
SF3B1-206ENST00000462613 CFHR4Q92496 578 aa5.12□□□□□ -1.59
SF3B1-206ENST00000462613 MOB3AQ96BX8 217 aa5.12□□□□□ -1.59
SF3B1-206ENST00000462613 FLYWCH2Q96CP2 140 aaKnown RBP5.12□□□□□ -1.59
SF3B1-206ENST00000462613 EAF1Q96JC9 268 aaPredicted RBP5.12□□□□□ -1.59
SF3B1-206ENST00000462613 SCGB3A2Q96PL1 93 aa5.12□□□□□ -1.59
SF3B1-206ENST00000462613 PRRT1Q99946 306 aa5.12□□□□□ -1.59
SF3B1-206ENST00000462613 RASL11BQ9BPW5 248 aa5.12□□□□□ -1.59
SF3B1-206ENST00000462613 THAP7Q9BT49 309 aaPredicted RBP5.12□□□□□ -1.59
SF3B1-206ENST00000462613 PARP12Q9H0J9 701 aaKnown RBP5.12□□□□□ -1.59
SF3B1-206ENST00000462613 MCUBQ9NWR8 336 aa5.12□□□□□ -1.59
SF3B1-206ENST00000462613 SDHAF2Q9NX18 166 aa5.12□□□□□ -1.59
SF3B1-206ENST00000462613 SCP2D1Q9UJQ7 156 aa5.12□□□□□ -1.59
SF3B1-206ENST00000462613 RBMX2Q9Y388 322 aaKnown RBP5.12□□□□□ -1.59
SF3B1-206ENST00000462613 TET2Q6N021 2002 aaPredicted RBP5.11□□□□□ -1.59
SF3B1-206ENST00000462613 TMEM89A2RUT3 159 aa5.11□□□□□ -1.59
SF3B1-206ENST00000462613 CLPSL1A2RUU4 121 aa5.11□□□□□ -1.59
SF3B1-206ENST00000462613 M0QYG6 137 aa5.11□□□□□ -1.59
SF3B1-206ENST00000462613 GPR31O00270 319 aa5.11□□□□□ -1.59
SF3B1-206ENST00000462613 SHOXO15266 292 aa5.11□□□□□ -1.59
SF3B1-206ENST00000462613 NBR2O15453 112 aa5.11□□□□□ -1.59
SF3B1-206ENST00000462613 KCNAB3O43448 404 aa5.11□□□□□ -1.59
SF3B1-206ENST00000462613 FCGR3BO75015 233 aa5.11□□□□□ -1.59
SF3B1-206ENST00000462613 TSPAN9O75954 239 aa5.11□□□□□ -1.59
SF3B1-206ENST00000462613 SPDEFO95238 335 aa5.11□□□□□ -1.59
SF3B1-206ENST00000462613 CD3DP04234 171 aa5.11□□□□□ -1.59
SF3B1-206ENST00000462613 CT45A6P0DMU7 189 aa5.11□□□□□ -1.59
SF3B1-206ENST00000462613 CT45A5P0DMU8 189 aa5.11□□□□□ -1.59
SF3B1-206ENST00000462613 CT45A7P0DMV0 189 aa5.11□□□□□ -1.59
SF3B1-206ENST00000462613 LGALS7P47929 136 aa5.11□□□□□ -1.59
SF3B1-206ENST00000462613 SRSF2Q01130 221 aaKnown RBP5.11□□□□□ -1.59
SF3B1-206ENST00000462613 CNPY1Q3B7I2 92 aa5.11□□□□□ -1.59
SF3B1-206ENST00000462613 KRTAP24-1Q3LI83 254 aa5.11□□□□□ -1.59
SF3B1-206ENST00000462613 VMA21Q3ZAQ7 101 aa5.11□□□□□ -1.59
SF3B1-206ENST00000462613 SCGB2B2Q4G0G5 96 aa5.11□□□□□ -1.59
SF3B1-206ENST00000462613 AADACL3Q5VUY0 350 aa5.11□□□□□ -1.59
SF3B1-206ENST00000462613 FOXB2Q5VYV0 432 aa5.11□□□□□ -1.59
SF3B1-206ENST00000462613 GLDNQ6ZMI3 551 aaPredicted RBP5.11□□□□□ -1.59
SF3B1-206ENST00000462613 CCDC190Q86UF4 302 aa5.11□□□□□ -1.59
SF3B1-206ENST00000462613 LYSMD2Q8IV50 215 aa5.11□□□□□ -1.59
SF3B1-206ENST00000462613 TCTEX1D1Q8N7M0 179 aa5.11□□□□□ -1.59
SF3B1-206ENST00000462613 C3orf56Q8N813 242 aa5.11□□□□□ -1.59
SF3B1-206ENST00000462613 DRAXINQ8NBI3 349 aaPredicted RBP5.11□□□□□ -1.59
SF3B1-206ENST00000462613 OR5AN1Q8NGI8 311 aa5.11□□□□□ -1.59
SF3B1-206ENST00000462613 VSTM2AQ8TAG5 236 aa5.11□□□□□ -1.59
SF3B1-206ENST00000462613 OSR1Q8TAX0 266 aaPredicted RBP5.11□□□□□ -1.59
SF3B1-206ENST00000462613 PIFOQ8TCI5 191 aa5.11□□□□□ -1.59
SF3B1-206ENST00000462613 CD300LFQ8TDQ1 290 aa5.11□□□□□ -1.59
SF3B1-206ENST00000462613 ZNF486Q96H40 463 aaPredicted RBP5.11□□□□□ -1.59
SF3B1-206ENST00000462613 HARBI1Q96MB7 349 aa5.11□□□□□ -1.59
SF3B1-206ENST00000462613 GON7Q9BXV9 100 aa5.11□□□□□ -1.59
SF3B1-206ENST00000462613 WDR12Q9GZL7 423 aaKnown RBP5.11□□□□□ -1.59
SF3B1-206ENST00000462613 LIN7CQ9NUP9 197 aaKnown RBP5.11□□□□□ -1.59
SF3B1-206ENST00000462613 C14orf166Q9Y224 244 aaKnown RBP5.11□□□□□ -1.59
SF3B1-206ENST00000462613 RNF114Q9Y508 228 aa5.11□□□□□ -1.59
SF3B1-206ENST00000462613 PLXNB1O43157 2135 aa5.11□□□□□ -1.59
SF3B1-206ENST00000462613 IGKV1D-13A0A0B4J2D9 117 aa5.1□□□□□ -1.59
SF3B1-206ENST00000462613 PIGBOS1A0A0B4J2F0 54 aa5.1□□□□□ -1.59
SF3B1-206ENST00000462613 ANKRD20A5PA0PJZ0 165 aa5.1□□□□□ -1.59
SF3B1-206ENST00000462613 NAP1L6A6NFF2 107 aa5.1□□□□□ -1.59
SF3B1-206ENST00000462613 H0YJW9 148 aa5.1□□□□□ -1.59
SF3B1-206ENST00000462613 CHST1O43916 411 aa5.1□□□□□ -1.59
SF3B1-206ENST00000462613 ACTL6BO94805 426 aa5.1□□□□□ -1.59
SF3B1-206ENST00000462613 CRYZL1O95825 349 aa5.1□□□□□ -1.59
SF3B1-206ENST00000462613 HRASP01112 189 aa5.1□□□□□ -1.59
SF3B1-206ENST00000462613 CD74P04233 296 aa5.1□□□□□ -1.59
SF3B1-206ENST00000462613 IGKV1-13P0DP09 117 aa5.1□□□□□ -1.59
SF3B1-206ENST00000462613 DUTP33316 252 aaKnown RBP5.1□□□□□ -1.59
SF3B1-206ENST00000462613 VDAC2P45880 294 aaPredicted RBP5.1□□□□□ -1.59
SF3B1-206ENST00000462613 PPP5CP53041 499 aa5.1□□□□□ -1.59
SF3B1-206ENST00000462613 UCP3P55916 312 aa5.1□□□□□ -1.59
SF3B1-206ENST00000462613 ERVK-16P61578 105 aa5.1□□□□□ -1.59
SF3B1-206ENST00000462613 SLC35B1P78383 322 aa5.1□□□□□ -1.59
SF3B1-206ENST00000462613 SURF2Q15527 256 aaPredicted RBP5.1□□□□□ -1.59
SF3B1-206ENST00000462613 Q6ZSV7 163 aa5.1□□□□□ -1.59
SF3B1-206ENST00000462613 SLC35E3Q7Z769 313 aa5.1□□□□□ -1.59
SF3B1-206ENST00000462613 MFSD4AQ8N468 514 aa5.1□□□□□ -1.59
SF3B1-206ENST00000462613 C5orf56Q8N8D9 126 aa5.1□□□□□ -1.59
SF3B1-206ENST00000462613 ZNF383Q8NA42 475 aa5.1□□□□□ -1.59
SF3B1-206ENST00000462613 BVESQ8NE79 360 aa5.1□□□□□ -1.59
SF3B1-206ENST00000462613 OR4C16Q8NGL9 310 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms