RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 TRDCB7Z8K6 153 aa11.82□□□□□ -0.52
SKA3-204ENST00000462482 SLC17A2O00624 439 aa11.82□□□□□ -0.52
SKA3-204ENST00000462482 IGLV1-51P01701 117 aa11.82□□□□□ -0.52
SKA3-204ENST00000462482 IGKV1-16P04430 117 aa11.82□□□□□ -0.52
SKA3-204ENST00000462482 AADACP22760 399 aa11.82□□□□□ -0.52
SKA3-204ENST00000462482 LGALS7P47929 136 aa11.82□□□□□ -0.52
SKA3-204ENST00000462482 VEGFCP49767 419 aa11.82□□□□□ -0.52
SKA3-204ENST00000462482 TAGLNQ01995 201 aaKnown RBP11.82□□□□□ -0.52
SKA3-204ENST00000462482 TRAM1Q15629 374 aa11.82□□□□□ -0.52
SKA3-204ENST00000462482 LIPKQ5VXJ0 399 aa11.82□□□□□ -0.52
SKA3-204ENST00000462482 FAM89BQ8N5H3 189 aa11.82□□□□□ -0.52
SKA3-204ENST00000462482 ZNF383Q8NA42 475 aa11.82□□□□□ -0.52
SKA3-204ENST00000462482 OR56B1Q8NGI3 324 aa11.82□□□□□ -0.52
SKA3-204ENST00000462482 TMEM203Q969S6 136 aa11.82□□□□□ -0.52
SKA3-204ENST00000462482 RDH8Q9NYR8 311 aa11.82□□□□□ -0.52
SKA3-204ENST00000462482 ANKRD34BA5PLL1 514 aa11.81□□□□□ -0.52
SKA3-204ENST00000462482 CD3GP09693 182 aa11.81□□□□□ -0.52
SKA3-204ENST00000462482 PSMA1P25786 263 aaKnown RBP11.81□□□□□ -0.52
SKA3-204ENST00000462482 RTL8BQ17RB0 113 aa11.81□□□□□ -0.52
SKA3-204ENST00000462482 OGFRL1Q5TC84 451 aaPredicted RBP11.81□□□□□ -0.52
SKA3-204ENST00000462482 HAPLN4Q86UW8 402 aa11.81□□□□□ -0.52
SKA3-204ENST00000462482 OR4A4PQ8NGN8 299 aa11.81□□□□□ -0.52
SKA3-204ENST00000462482 ARHGAP5-AS1Q96IT6 56 aa11.81□□□□□ -0.52
SKA3-204ENST00000462482 PHB2Q99623 299 aa11.81□□□□□ -0.52
SKA3-204ENST00000462482 TM2D3Q9BRN9 247 aa11.81□□□□□ -0.52
SKA3-204ENST00000462482 PECRQ9BY49 303 aa11.81□□□□□ -0.52
SKA3-204ENST00000462482 RBM7Q9Y580 266 aaKnown RBP11.81□□□□□ -0.52
SKA3-204ENST00000462482 BET1O15155 118 aa11.8□□□□□ -0.52
SKA3-204ENST00000462482 IFNA6P05013 189 aa11.8□□□□□ -0.52
SKA3-204ENST00000462482 HSMCR30P0CW71 290 aa11.8□□□□□ -0.52
SKA3-204ENST00000462482 CD37P11049 281 aa11.8□□□□□ -0.52
SKA3-204ENST00000462482 PSMD7P51665 324 aa11.8□□□□□ -0.52
SKA3-204ENST00000462482 ZFAND6Q6FIF0 208 aa11.8□□□□□ -0.52
SKA3-204ENST00000462482 GTSCR1Q86UQ5 136 aa11.8□□□□□ -0.52
SKA3-204ENST00000462482 OR9G4Q8NGQ1 327 aa11.8□□□□□ -0.52
SKA3-204ENST00000462482 HARBI1Q96MB7 349 aa11.8□□□□□ -0.52
SKA3-204ENST00000462482 SPATA25Q9BR10 227 aa11.8□□□□□ -0.52
SKA3-204ENST00000462482 TUBA4BQ9H853 241 aa11.8□□□□□ -0.52
SKA3-204ENST00000462482 COA4Q9NYJ1 87 aa11.8□□□□□ -0.52
SKA3-204ENST00000462482 TPRKBQ9Y3C4 175 aa11.8□□□□□ -0.52
SKA3-204ENST00000462482 AK6Q9Y3D8 172 aaKnown RBP11.8□□□□□ -0.52
SKA3-204ENST00000462482 A8MZ25 164 aa11.79□□□□□ -0.52
SKA3-204ENST00000462482 SHOXO15266 292 aa11.79□□□□□ -0.52
SKA3-204ENST00000462482 FABP7O15540 132 aa11.79□□□□□ -0.52
SKA3-204ENST00000462482 DENRO43583 198 aaKnown RBP11.79□□□□□ -0.52
SKA3-204ENST00000462482 RRASP10301 218 aa11.79□□□□□ -0.52
SKA3-204ENST00000462482 RPEL1Q2QD12 228 aa11.79□□□□□ -0.52
SKA3-204ENST00000462482 LCN12Q6JVE5 192 aa11.79□□□□□ -0.52
SKA3-204ENST00000462482 OR10J5Q8NHC4 309 aa11.79□□□□□ -0.52
SKA3-204ENST00000462482 FAM3DQ96BQ1 224 aa11.79□□□□□ -0.52
SKA3-204ENST00000462482 USMG5Q96IX5 58 aa11.79□□□□□ -0.52
SKA3-204ENST00000462482 CENPOQ9BU64 300 aa11.79□□□□□ -0.52
SKA3-204ENST00000462482 OR2D2Q9H210 308 aa11.79□□□□□ -0.52
SKA3-204ENST00000462482 PEF1Q9UBV8 284 aaKnown RBP11.79□□□□□ -0.52
SKA3-204ENST00000462482 LSM2Q9Y333 95 aaKnown RBP11.79□□□□□ -0.52
SKA3-204ENST00000462482 A0A0B4J203 849 aa11.78□□□□□ -0.52
SKA3-204ENST00000462482 CASQ2O14958 399 aaPredicted RBP11.78□□□□□ -0.52
SKA3-204ENST00000462482 MPPED1O15442 326 aa11.78□□□□□ -0.52
SKA3-204ENST00000462482 PROP1O75360 226 aa11.78□□□□□ -0.52
SKA3-204ENST00000462482 GADD45AP24522 165 aa11.78□□□□□ -0.52
SKA3-204ENST00000462482 TMEM50BP56557 158 aa11.78□□□□□ -0.52
SKA3-204ENST00000462482 SYNJ2BPP57105 145 aa11.78□□□□□ -0.52
SKA3-204ENST00000462482 LINC00205P59089 165 aa11.78□□□□□ -0.52
SKA3-204ENST00000462482 TPBGQ13641 420 aa11.78□□□□□ -0.52
SKA3-204ENST00000462482 KLF5Q13887 457 aaPredicted RBP11.78□□□□□ -0.52
SKA3-204ENST00000462482 VMA21Q3ZAQ7 101 aa11.78□□□□□ -0.52
SKA3-204ENST00000462482 Q8N1Y9 231 aa11.78□□□□□ -0.52
SKA3-204ENST00000462482 TINAGL1Q9GZM7 467 aaPredicted RBP11.78□□□□□ -0.52
SKA3-204ENST00000462482 C19orf73Q9NVV2 129 aa11.78□□□□□ -0.52
SKA3-204ENST00000462482 RAB22AQ9UL26 194 aa11.78□□□□□ -0.52
SKA3-204ENST00000462482 IGKV1-6A0A0C4DH72 117 aa11.77□□□□□ -0.53
SKA3-204ENST00000462482 LCE6AA0A183 80 aa11.77□□□□□ -0.53
SKA3-204ENST00000462482 FOXI3A8MTJ6 420 aaPredicted RBP11.77□□□□□ -0.53
SKA3-204ENST00000462482 BRI3O95415 125 aa11.77□□□□□ -0.53
SKA3-204ENST00000462482 CALRP27797 417 aaKnown RBP11.77□□□□□ -0.53
SKA3-204ENST00000462482 CLDN12P56749 244 aa11.77□□□□□ -0.53
SKA3-204ENST00000462482 PJVKQ0ZLH3 352 aa11.77□□□□□ -0.53
SKA3-204ENST00000462482 C2orf76Q3KRA6 126 aa11.77□□□□□ -0.53
SKA3-204ENST00000462482 Q8N402 240 aa11.77□□□□□ -0.53
SKA3-204ENST00000462482 BVESQ8NE79 360 aa11.77□□□□□ -0.53
SKA3-204ENST00000462482 SNAPC3Q92966 411 aa11.77□□□□□ -0.53
SKA3-204ENST00000462482 RAB3CQ96E17 227 aa11.77□□□□□ -0.53
SKA3-204ENST00000462482 ADTRPQ96IZ2 230 aa11.77□□□□□ -0.53
SKA3-204ENST00000462482 GINS4Q9BRT9 223 aa11.77□□□□□ -0.53
SKA3-204ENST00000462482 CCDC90BQ9GZT6 254 aa11.77□□□□□ -0.53
SKA3-204ENST00000462482 PEMTQ9UBM1 199 aa11.77□□□□□ -0.53
SKA3-204ENST00000462482 V9GY05 133 aa11.77□□□□□ -0.53
SKA3-204ENST00000462482 PDCD5O14737 125 aa11.76□□□□□ -0.53
SKA3-204ENST00000462482 RGS10O43665 173 aa11.76□□□□□ -0.53
SKA3-204ENST00000462482 CREBL2O60519 120 aaPredicted RBP11.76□□□□□ -0.53
SKA3-204ENST00000462482 ACTL6BO94805 426 aa11.76□□□□□ -0.53
SKA3-204ENST00000462482 DIRAS3O95661 229 aa11.76□□□□□ -0.53
SKA3-204ENST00000462482 TALDO1P37837 337 aa11.76□□□□□ -0.53
SKA3-204ENST00000462482 RPS25P62851 125 aaKnown RBP11.76□□□□□ -0.53
SKA3-204ENST00000462482 TMEM177Q53S58 311 aa11.76□□□□□ -0.53
SKA3-204ENST00000462482 ZNF343Q6P1L6 599 aa11.76□□□□□ -0.53
SKA3-204ENST00000462482 TMEM91Q6ZNR0 172 aa11.76□□□□□ -0.53
SKA3-204ENST00000462482 ACOT13Q9NPJ3 140 aa11.76□□□□□ -0.53
SKA3-204ENST00000462482 SDHAF2Q9NX18 166 aa11.76□□□□□ -0.53
SKA3-204ENST00000462482 MSGN1A6NI15 193 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms