RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 SSX2Q16385 188 aa4.56□□□□□ -1.68
VPS36-202ENST00000462289 IGSF11Q5DX21 431 aa4.56□□□□□ -1.68
VPS36-202ENST00000462289 CNIH2Q6PI25 160 aa4.56□□□□□ -1.68
VPS36-202ENST00000462289 DHRS11Q6UWP2 260 aa4.56□□□□□ -1.68
VPS36-202ENST00000462289 LINC00299Q6ZSB3 139 aa4.56□□□□□ -1.68
VPS36-202ENST00000462289 OVCH2Q7RTZ1 564 aa4.56□□□□□ -1.68
VPS36-202ENST00000462289 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.56□□□□□ -1.68
VPS36-202ENST00000462289 OR52L2PQ8NGH6 319 aa4.56□□□□□ -1.68
VPS36-202ENST00000462289 NEK7Q8TDX7 302 aa4.56□□□□□ -1.68
VPS36-202ENST00000462289 DDB2Q92466 427 aa4.56□□□□□ -1.68
VPS36-202ENST00000462289 LEAP2Q969E1 77 aa4.56□□□□□ -1.68
VPS36-202ENST00000462289 DGCR14Q96DF8 476 aaKnown RBP4.56□□□□□ -1.68
VPS36-202ENST00000462289 S100A16Q96FQ6 103 aaKnown RBP4.56□□□□□ -1.68
VPS36-202ENST00000462289 RAX2Q96IS3 184 aa4.56□□□□□ -1.68
VPS36-202ENST00000462289 RBM14Q96PK6 669 aaKnown RBP4.56□□□□□ -1.68
VPS36-202ENST00000462289 ABHD1Q96SE0 405 aa4.56□□□□□ -1.68
VPS36-202ENST00000462289 NABP2Q9BQ15 211 aa4.56□□□□□ -1.68
VPS36-202ENST00000462289 ABHD14AQ9BUJ0 271 aa4.56□□□□□ -1.68
VPS36-202ENST00000462289 C19orf24Q9BVV8 132 aa4.56□□□□□ -1.68
VPS36-202ENST00000462289 C11orf54Q9H0W9 315 aaPredicted RBP4.56□□□□□ -1.68
VPS36-202ENST00000462289 OR2S2Q9NQN1 319 aa4.56□□□□□ -1.68
VPS36-202ENST00000462289 DIABLOQ9NR28 239 aa4.56□□□□□ -1.68
VPS36-202ENST00000462289 KCNIP1Q9NZI2 227 aa4.56□□□□□ -1.68
VPS36-202ENST00000462289 NDUFA13Q9P0J0 144 aa4.56□□□□□ -1.68
VPS36-202ENST00000462289 OR1A1Q9P1Q5 309 aa4.56□□□□□ -1.68
VPS36-202ENST00000462289 RABL2AQ9UBK7 228 aaPredicted RBP4.56□□□□□ -1.68
VPS36-202ENST00000462289 RSL24D1Q9UHA3 163 aaKnown RBP4.56□□□□□ -1.68
VPS36-202ENST00000462289 ZNF230Q9UIE0 474 aaPredicted RBP4.56□□□□□ -1.68
VPS36-202ENST00000462289 ANXA10Q9UJ72 324 aa4.56□□□□□ -1.68
VPS36-202ENST00000462289 RABL2BQ9UNT1 228 aa4.56□□□□□ -1.68
VPS36-202ENST00000462289 TET2Q6N021 2002 aaPredicted RBP4.55□□□□□ -1.68
VPS36-202ENST00000462289 IGHV3-43A0A0B4J1X8 118 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 A0A1B0GUS0 222 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 A0A1W2PRD5 423 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 A0A1W2PRF3 423 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 A0A1W2PRM7 423 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 DPPA5A6NC42 116 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 FAM172BPA6NC97 362 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 TIMM23O14925 209 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 RAB29O14966 203 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 GSTZ1O43708 216 aaPredicted RBP4.55□□□□□ -1.68
VPS36-202ENST00000462289 NDUFA3O95167 84 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 CD74P04233 296 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 GAPDHP04406 335 aaKnown RBP4.55□□□□□ -1.68
VPS36-202ENST00000462289 CT45A6P0DMU7 189 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 CT45A5P0DMU8 189 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 CT45A7P0DMV0 189 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 IGHV3-43DP0DP04 118 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 PTHLHP12272 177 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 NFYBP25208 207 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 PAX6P26367 422 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 CRIP2P52943 208 aaPredicted RBP4.55□□□□□ -1.68
VPS36-202ENST00000462289 BRWD1-AS2P59051 145 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 MRPS10P82664 201 aaKnown RBP4.55□□□□□ -1.68
VPS36-202ENST00000462289 SRSF2Q01130 221 aaKnown RBP4.55□□□□□ -1.68
VPS36-202ENST00000462289 SSBP1Q04837 148 aaKnown RBP4.55□□□□□ -1.68
VPS36-202ENST00000462289 VAX1Q5SQQ9 334 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 MZT2AQ6P582 158 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 C11orf88Q6PI97 169 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 RBMS3Q6XE24 437 aaKnown RBP4.55□□□□□ -1.68
VPS36-202ENST00000462289 Q6ZSV7 163 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 CCDC190Q86UF4 302 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 LHFPL1Q86WI0 220 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 LAX1Q8IWV1 398 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 CADM3Q8N126 398 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 FAM71E2Q8N5Q1 922 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 GVQW1Q8N7I0 195 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 CLRN3Q8NCR9 226 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 BEST4Q8NFU0 473 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 OR2AK2Q8NG84 335 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 OR5AP2Q8NGF4 316 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 OR8H1Q8NGG4 311 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 LINC01006Q8NI28 216 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 UBALD1Q8TB05 177 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 SMIM4Q8WVI0 70 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 GIMAP1Q8WWP7 306 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 MMP27Q9H306 513 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 ZNF702PQ9H963 129 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 RAB18Q9NP72 206 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 SERTAD4Q9NUC0 356 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 RDH8Q9NYR8 311 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 PIPOXQ9P0Z9 390 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 GNG12Q9UBI6 72 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 MTFP1Q9UDX5 166 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 PITPNC1Q9UKF7 332 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 FAM96BQ9Y3D0 163 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 OR2W1Q9Y3N9 320 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 V9GYH0 126 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 CMYA5Q8N3K9 4069 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 NOTCH3Q9UM47 2321 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 NOTCH1P46531 2555 aa4.55□□□□□ -1.68
VPS36-202ENST00000462289 IGKV1D-13A0A0B4J2D9 117 aa4.54□□□□□ -1.68
VPS36-202ENST00000462289 A0A1W2PPE3 182 aa4.54□□□□□ -1.68
VPS36-202ENST00000462289 OR5H14A6NHG9 310 aa4.54□□□□□ -1.68
VPS36-202ENST00000462289 H0YJW9 148 aa4.54□□□□□ -1.68
VPS36-202ENST00000462289 GABARAPH6UMI1 98 aa4.54□□□□□ -1.68
VPS36-202ENST00000462289 M0QZK8 103 aa4.54□□□□□ -1.68
VPS36-202ENST00000462289 TOR1AO14656 332 aa4.54□□□□□ -1.68
VPS36-202ENST00000462289 FGF2P09038 288 aa4.54□□□□□ -1.68
VPS36-202ENST00000462289 IGKV1-13P0DP09 117 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms