RNA–Protein interactions for RNA: ENST00000455548.2

SMPD4-214, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-214ENST00000455548 FOXE3Q13461 319 aa12.78□□□□□ -0.36
SMPD4-214ENST00000455548 GPR141Q7Z602 305 aa12.78□□□□□ -0.36
SMPD4-214ENST00000455548 FLYWCH2Q96CP2 140 aaKnown RBP12.78□□□□□ -0.36
SMPD4-214ENST00000455548 FBXL15Q9H469 300 aa12.78□□□□□ -0.36
SMPD4-214ENST00000455548 PARP11Q9NR21 331 aa12.78□□□□□ -0.36
SMPD4-214ENST00000455548 IGHG4P01861 327 aa12.77□□□□□ -0.37
SMPD4-214ENST00000455548 PF4P02776 101 aa12.77□□□□□ -0.37
SMPD4-214ENST00000455548 IGKV1-16P04430 117 aa12.77□□□□□ -0.37
SMPD4-214ENST00000455548 ELANEP08246 267 aa12.77□□□□□ -0.37
SMPD4-214ENST00000455548 LGALS7P47929 136 aa12.77□□□□□ -0.37
SMPD4-214ENST00000455548 ALDH3B2P48448 385 aa12.77□□□□□ -0.37
SMPD4-214ENST00000455548 RORCP51449 518 aa12.77□□□□□ -0.37
SMPD4-214ENST00000455548 LINC00205P59089 165 aa12.77□□□□□ -0.37
SMPD4-214ENST00000455548 PSG5Q15238 335 aa12.77□□□□□ -0.37
SMPD4-214ENST00000455548 CTF1Q16619 201 aa12.77□□□□□ -0.37
SMPD4-214ENST00000455548 RTL8BQ17RB0 113 aa12.77□□□□□ -0.37
SMPD4-214ENST00000455548 CXorf66Q5JRM2 361 aaPredicted RBP12.77□□□□□ -0.37
SMPD4-214ENST00000455548 TMEM69Q5SWH9 247 aa12.77□□□□□ -0.37
SMPD4-214ENST00000455548 GPR107Q5VW38 600 aa12.77□□□□□ -0.37
SMPD4-214ENST00000455548 ZNF660Q6AZW8 331 aaPredicted RBP12.77□□□□□ -0.37
SMPD4-214ENST00000455548 ZNF645Q8N7E2 425 aa12.77□□□□□ -0.37
SMPD4-214ENST00000455548 GVQW1Q8N7I0 195 aa12.77□□□□□ -0.37
SMPD4-214ENST00000455548 RNF152Q8N8N0 203 aa12.77□□□□□ -0.37
SMPD4-214ENST00000455548 C5orf30Q96GV9 206 aa12.77□□□□□ -0.37
SMPD4-214ENST00000455548 CMTM3Q96MX0 182 aa12.77□□□□□ -0.37
SMPD4-214ENST00000455548 NAA50Q9GZZ1 169 aaKnown RBP12.77□□□□□ -0.37
SMPD4-214ENST00000455548 COMMD3Q9UBI1 195 aa12.77□□□□□ -0.37
SMPD4-214ENST00000455548 METTL1Q9UBP6 276 aaKnown RBP12.77□□□□□ -0.37
SMPD4-214ENST00000455548 ATP6V0E1O15342 81 aa12.76□□□□□ -0.37
SMPD4-214ENST00000455548 TUSC2O75896 110 aa12.76□□□□□ -0.37
SMPD4-214ENST00000455548 APOA1P02647 267 aa12.76□□□□□ -0.37
SMPD4-214ENST00000455548 DUTP33316 252 aaKnown RBP12.76□□□□□ -0.37
SMPD4-214ENST00000455548 TAS2R20P59543 309 aa12.76□□□□□ -0.37
SMPD4-214ENST00000455548 CFHR3Q02985 330 aa12.76□□□□□ -0.37
SMPD4-214ENST00000455548 IFT46Q9NQC8 304 aa12.76□□□□□ -0.37
SMPD4-214ENST00000455548 NECAP2Q9NVZ3 263 aa12.76□□□□□ -0.37
SMPD4-214ENST00000455548 TRAV41A0A0B4J266 112 aa12.75□□□□□ -0.37
SMPD4-214ENST00000455548 SMIM31A0A1B0GVY4 71 aa12.75□□□□□ -0.37
SMPD4-214ENST00000455548 NUDT19A8MXV4 375 aa12.75□□□□□ -0.37
SMPD4-214ENST00000455548 PTHLHP12272 177 aa12.75□□□□□ -0.37
SMPD4-214ENST00000455548 CRIP2P52943 208 aaPredicted RBP12.75□□□□□ -0.37
SMPD4-214ENST00000455548 CX3CL1P78423 397 aa12.75□□□□□ -0.37
SMPD4-214ENST00000455548 DEFA6Q01524 100 aa12.75□□□□□ -0.37
SMPD4-214ENST00000455548 TMEM177Q53S58 311 aa12.75□□□□□ -0.37
SMPD4-214ENST00000455548 MZT2AQ6P582 158 aa12.75□□□□□ -0.37
SMPD4-214ENST00000455548 BVESQ8NE79 360 aa12.75□□□□□ -0.37
SMPD4-214ENST00000455548 AP3S1Q92572 193 aa12.75□□□□□ -0.37
SMPD4-214ENST00000455548 HARBI1Q96MB7 349 aa12.75□□□□□ -0.37
SMPD4-214ENST00000455548 IGKV1D-13A0A0B4J2D9 117 aa12.74□□□□□ -0.37
SMPD4-214ENST00000455548 J3QRK9 145 aa12.74□□□□□ -0.37
SMPD4-214ENST00000455548 FCN1O00602 326 aa12.74□□□□□ -0.37
SMPD4-214ENST00000455548 SLC25A17O43808 307 aa12.74□□□□□ -0.37
SMPD4-214ENST00000455548 RPLP1P05386 114 aaKnown RBP12.74□□□□□ -0.37
SMPD4-214ENST00000455548 EIF4EP06730 217 aaKnown RBP12.74□□□□□ -0.37
SMPD4-214ENST00000455548 IGKV1-13P0DP09 117 aa12.74□□□□□ -0.37
SMPD4-214ENST00000455548 CD33P20138 364 aa12.74□□□□□ -0.37
SMPD4-214ENST00000455548 PRSS3P35030 304 aa12.74□□□□□ -0.37
SMPD4-214ENST00000455548 TMEM267Q0VDI3 215 aaPredicted RBP12.74□□□□□ -0.37
SMPD4-214ENST00000455548 ZNF562Q6V9R5 426 aa12.74□□□□□ -0.37
SMPD4-214ENST00000455548 ZNF695Q8IW36 515 aa12.74□□□□□ -0.37
SMPD4-214ENST00000455548 KLHL30-AS1Q8NEE0 82 aa12.74□□□□□ -0.37
SMPD4-214ENST00000455548 WFDC9Q8NEX5 89 aa12.74□□□□□ -0.37
SMPD4-214ENST00000455548 OR5AP2Q8NGF4 316 aa12.74□□□□□ -0.37
SMPD4-214ENST00000455548 DDB2Q92466 427 aa12.74□□□□□ -0.37
SMPD4-214ENST00000455548 SNAPC3Q92966 411 aa12.74□□□□□ -0.37
SMPD4-214ENST00000455548 RBMX2Q9Y388 322 aaKnown RBP12.74□□□□□ -0.37
SMPD4-214ENST00000455548 PRELID3BQ9Y3B1 194 aa12.74□□□□□ -0.37
SMPD4-214ENST00000455548 WSB1Q9Y6I7 421 aa12.74□□□□□ -0.37
SMPD4-214ENST00000455548 MEIS3P1A6NDR6 274 aa12.73□□□□□ -0.37
SMPD4-214ENST00000455548 LINC00473A8K010 186 aa12.73□□□□□ -0.37
SMPD4-214ENST00000455548 SHOXO15266 292 aa12.73□□□□□ -0.37
SMPD4-214ENST00000455548 ZNF182P17025 639 aaPredicted RBP12.73□□□□□ -0.37
SMPD4-214ENST00000455548 PSMB8P28062 276 aa12.73□□□□□ -0.37
SMPD4-214ENST00000455548 PPIFP30405 207 aaKnown RBP12.73□□□□□ -0.37
SMPD4-214ENST00000455548 CDX1P47902 265 aaPredicted RBP12.73□□□□□ -0.37
SMPD4-214ENST00000455548 NDPQ00604 133 aa12.73□□□□□ -0.37
SMPD4-214ENST00000455548 CDK10Q15131 360 aa12.73□□□□□ -0.37
SMPD4-214ENST00000455548 TMEM65Q6PI78 240 aa12.73□□□□□ -0.37
SMPD4-214ENST00000455548 TCTEX1D1Q8N7M0 179 aa12.73□□□□□ -0.37
SMPD4-214ENST00000455548 ABHD5Q8WTS1 349 aa12.73□□□□□ -0.37
SMPD4-214ENST00000455548 CLCC1Q96S66 551 aa12.73□□□□□ -0.37
SMPD4-214ENST00000455548 HSD17B10Q99714 261 aaKnown RBP12.73□□□□□ -0.37
SMPD4-214ENST00000455548 ANAPC10Q9UM13 185 aa12.73□□□□□ -0.37
SMPD4-214ENST00000455548 G3V318 75 aa12.72□□□□□ -0.37
SMPD4-214ENST00000455548 G3V4G9 280 aa12.72□□□□□ -0.37
SMPD4-214ENST00000455548 CRYZL1O95825 349 aa12.72□□□□□ -0.37
SMPD4-214ENST00000455548 CA2P00918 260 aa12.72□□□□□ -0.37
SMPD4-214ENST00000455548 IGLV2-23P01705 113 aa12.72□□□□□ -0.37
SMPD4-214ENST00000455548 AADACP22760 399 aa12.72□□□□□ -0.37
SMPD4-214ENST00000455548 FCGR2CP31995 323 aa12.72□□□□□ -0.37
SMPD4-214ENST00000455548 MSMO1Q15800 293 aa12.72□□□□□ -0.37
SMPD4-214ENST00000455548 SAMD5Q5TGI4 173 aa12.72□□□□□ -0.37
SMPD4-214ENST00000455548 LCNL1Q6ZST4 164 aa12.72□□□□□ -0.37
SMPD4-214ENST00000455548 KCTD9Q7L273 389 aa12.72□□□□□ -0.37
SMPD4-214ENST00000455548 PPP1R27Q86WC6 154 aa12.72□□□□□ -0.37
SMPD4-214ENST00000455548 C1QL4Q86Z23 238 aa12.72□□□□□ -0.37
SMPD4-214ENST00000455548 MINDY2Q8NBR6 621 aa12.72□□□□□ -0.37
SMPD4-214ENST00000455548 OSR1Q8TAX0 266 aaPredicted RBP12.72□□□□□ -0.37
SMPD4-214ENST00000455548 MRPS7Q9Y2R9 242 aaKnown RBP12.72□□□□□ -0.37
SMPD4-214ENST00000455548 NUBP2Q9Y5Y2 271 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms