RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 SULT1C2O00338 296 aa11.16□□□□□ -0.62
HDAC4-205ENST00000454542 RRHO14718 337 aa11.16□□□□□ -0.62
HDAC4-205ENST00000454542 SLC22A5O76082 557 aa11.16□□□□□ -0.62
HDAC4-205ENST00000454542 IGF1P05019 195 aa11.16□□□□□ -0.62
HDAC4-205ENST00000454542 PRSS3P35030 304 aa11.16□□□□□ -0.62
HDAC4-205ENST00000454542 SOX6P35712 828 aa11.16□□□□□ -0.62
HDAC4-205ENST00000454542 CRIP2P52943 208 aaPredicted RBP11.16□□□□□ -0.62
HDAC4-205ENST00000454542 NDPQ00604 133 aa11.16□□□□□ -0.62
HDAC4-205ENST00000454542 CDK10Q15131 360 aa11.16□□□□□ -0.62
HDAC4-205ENST00000454542 ZNF660Q6AZW8 331 aaPredicted RBP11.16□□□□□ -0.62
HDAC4-205ENST00000454542 TREML4Q6UXN2 200 aa11.16□□□□□ -0.62
HDAC4-205ENST00000454542 OVCH2Q7RTZ1 564 aa11.16□□□□□ -0.62
HDAC4-205ENST00000454542 FOXRED2Q8IWF2 684 aa11.16□□□□□ -0.62
HDAC4-205ENST00000454542 OR5AU1Q8NGC0 362 aa11.16□□□□□ -0.62
HDAC4-205ENST00000454542 ADTRPQ96IZ2 230 aa11.16□□□□□ -0.62
HDAC4-205ENST00000454542 NOL4LQ96MY1 436 aaPredicted RBP11.16□□□□□ -0.62
HDAC4-205ENST00000454542 MMP27Q9H306 513 aa11.16□□□□□ -0.62
HDAC4-205ENST00000454542 IFT46Q9NQC8 304 aa11.16□□□□□ -0.62
HDAC4-205ENST00000454542 SLC35D1Q9NTN3 355 aa11.16□□□□□ -0.62
HDAC4-205ENST00000454542 RBMX2Q9Y388 322 aaKnown RBP11.16□□□□□ -0.62
HDAC4-205ENST00000454542 WNK1Q9H4A3 2382 aa11.15□□□□□ -0.62
HDAC4-205ENST00000454542 IGHV7-81A0A0B4J1V7 117 aa11.15□□□□□ -0.62
HDAC4-205ENST00000454542 PSMB11A5LHX3 300 aa11.15□□□□□ -0.62
HDAC4-205ENST00000454542 LINC00473A8K010 186 aa11.15□□□□□ -0.62
HDAC4-205ENST00000454542 PPYP01298 95 aa11.15□□□□□ -0.62
HDAC4-205ENST00000454542 IGLV2-23P01705 113 aa11.15□□□□□ -0.62
HDAC4-205ENST00000454542 OR5H8P0DN80 308 aa11.15□□□□□ -0.62
HDAC4-205ENST00000454542 AADACP22760 399 aa11.15□□□□□ -0.62
HDAC4-205ENST00000454542 TMEM177Q53S58 311 aa11.15□□□□□ -0.62
HDAC4-205ENST00000454542 LAX1Q8IWV1 398 aa11.15□□□□□ -0.62
HDAC4-205ENST00000454542 RNF152Q8N8N0 203 aa11.15□□□□□ -0.62
HDAC4-205ENST00000454542 OR4X2Q8NGF9 303 aa11.15□□□□□ -0.62
HDAC4-205ENST00000454542 SLIRPQ9GZT3 109 aaKnown RBP11.15□□□□□ -0.62
HDAC4-205ENST00000454542 KIAA1456Q9P272 454 aa11.15□□□□□ -0.62
HDAC4-205ENST00000454542 RBM7Q9Y580 266 aaKnown RBP11.15□□□□□ -0.62
HDAC4-205ENST00000454542 SMIM31A0A1B0GVY4 71 aa11.14□□□□□ -0.63
HDAC4-205ENST00000454542 H7C2Y5 167 aa11.14□□□□□ -0.63
HDAC4-205ENST00000454542 NOL3O60936 208 aaKnown RBP11.14□□□□□ -0.63
HDAC4-205ENST00000454542 CSF1P09603 554 aa11.14□□□□□ -0.63
HDAC4-205ENST00000454542 FCGR2CP31995 323 aa11.14□□□□□ -0.63
HDAC4-205ENST00000454542 TAS2R46P59540 309 aa11.14□□□□□ -0.63
HDAC4-205ENST00000454542 PSG5Q15238 335 aa11.14□□□□□ -0.63
HDAC4-205ENST00000454542 C19orf54Q5BKX5 351 aa11.14□□□□□ -0.63
HDAC4-205ENST00000454542 CENPVQ7Z7K6 275 aaPredicted RBP11.14□□□□□ -0.63
HDAC4-205ENST00000454542 COMMD1Q8N668 190 aa11.14□□□□□ -0.63
HDAC4-205ENST00000454542 GIMAP1Q8WWP7 306 aa11.14□□□□□ -0.63
HDAC4-205ENST00000454542 TSNAXQ99598 290 aaKnown RBP11.14□□□□□ -0.63
HDAC4-205ENST00000454542 NXF2Q9GZY0 626 aaKnown RBP11.14□□□□□ -0.63
HDAC4-205ENST00000454542 FBXL15Q9H469 300 aa11.14□□□□□ -0.63
HDAC4-205ENST00000454542 EXTL2Q9UBQ6 330 aa11.14□□□□□ -0.63
HDAC4-205ENST00000454542 NBEAL1Q6ZS30 2694 aa11.14□□□□□ -0.63
HDAC4-205ENST00000454542 FAM25AB3EWG3 89 aa11.13□□□□□ -0.63
HDAC4-205ENST00000454542 FAM25CB3EWG5 89 aa11.13□□□□□ -0.63
HDAC4-205ENST00000454542 FAM25GB3EWG6 89 aa11.13□□□□□ -0.63
HDAC4-205ENST00000454542 ATP6V0E1O15342 81 aa11.13□□□□□ -0.63
HDAC4-205ENST00000454542 OPN1MWP04001 364 aa11.13□□□□□ -0.63
HDAC4-205ENST00000454542 FCER2P06734 321 aa11.13□□□□□ -0.63
HDAC4-205ENST00000454542 CRYGBP07316 175 aa11.13□□□□□ -0.63
HDAC4-205ENST00000454542 OPN1MW2P0DN77 364 aa11.13□□□□□ -0.63
HDAC4-205ENST00000454542 OPN1MW3P0DN78 364 aa11.13□□□□□ -0.63
HDAC4-205ENST00000454542 RRASP10301 218 aa11.13□□□□□ -0.63
HDAC4-205ENST00000454542 RCVRNP35243 200 aa11.13□□□□□ -0.63
HDAC4-205ENST00000454542 RPL30P62888 115 aaKnown RBP11.13□□□□□ -0.63
HDAC4-205ENST00000454542 DYRK1AQ13627 763 aa11.13□□□□□ -0.63
HDAC4-205ENST00000454542 RTL8BQ17RB0 113 aa11.13□□□□□ -0.63
HDAC4-205ENST00000454542 ZNF329Q86UD4 541 aa11.13□□□□□ -0.63
HDAC4-205ENST00000454542 SNX29P2Q8IUI4 249 aa11.13□□□□□ -0.63
HDAC4-205ENST00000454542 BVESQ8NE79 360 aa11.13□□□□□ -0.63
HDAC4-205ENST00000454542 MOB3AQ96BX8 217 aa11.13□□□□□ -0.63
HDAC4-205ENST00000454542 FLYWCH2Q96CP2 140 aaKnown RBP11.13□□□□□ -0.63
HDAC4-205ENST00000454542 FXYD6Q9H0Q3 95 aa11.13□□□□□ -0.63
HDAC4-205ENST00000454542 OR51J1Q9H342 316 aa11.13□□□□□ -0.63
HDAC4-205ENST00000454542 EHFQ9NZC4 300 aa11.13□□□□□ -0.63
HDAC4-205ENST00000454542 LINC00527Q9UJ94 153 aa11.13□□□□□ -0.63
HDAC4-205ENST00000454542 TSSC4Q9Y5U2 329 aaPredicted RBP11.13□□□□□ -0.63
HDAC4-205ENST00000454542 ZNF701M0R085 212 aaPredicted RBP11.12□□□□□ -0.63
HDAC4-205ENST00000454542 CTDSP2O14595 271 aa11.12□□□□□ -0.63
HDAC4-205ENST00000454542 IGHG4P01861 327 aa11.12□□□□□ -0.63
HDAC4-205ENST00000454542 PPIFP30405 207 aaKnown RBP11.12□□□□□ -0.63
HDAC4-205ENST00000454542 LGALS7P47929 136 aa11.12□□□□□ -0.63
HDAC4-205ENST00000454542 SLC35B1P78383 322 aa11.12□□□□□ -0.63
HDAC4-205ENST00000454542 SSBP2P81877 361 aaPredicted RBP11.12□□□□□ -0.63
HDAC4-205ENST00000454542 LIN54Q6MZP7 749 aa11.12□□□□□ -0.63
HDAC4-205ENST00000454542 DHRS11Q6UWP2 260 aa11.12□□□□□ -0.63
HDAC4-205ENST00000454542 ZNF66Q6ZN08 573 aa11.12□□□□□ -0.63
HDAC4-205ENST00000454542 KCTD9Q7L273 389 aa11.12□□□□□ -0.63
HDAC4-205ENST00000454542 LYSMD2Q8IV50 215 aa11.12□□□□□ -0.63
HDAC4-205ENST00000454542 ZBTB34Q8NCN2 500 aa11.12□□□□□ -0.63
HDAC4-205ENST00000454542 MYOZ3Q8TDC0 251 aa11.12□□□□□ -0.63
HDAC4-205ENST00000454542 HARBI1Q96MB7 349 aa11.12□□□□□ -0.63
HDAC4-205ENST00000454542 ABHD1Q96SE0 405 aa11.12□□□□□ -0.63
HDAC4-205ENST00000454542 HSD17B10Q99714 261 aaKnown RBP11.12□□□□□ -0.63
HDAC4-205ENST00000454542 GON7Q9BXV9 100 aa11.12□□□□□ -0.63
HDAC4-205ENST00000454542 TPSG1Q9NRR2 321 aa11.12□□□□□ -0.63
HDAC4-205ENST00000454542 METTL1Q9UBP6 276 aaKnown RBP11.12□□□□□ -0.63
HDAC4-205ENST00000454542 MRPS7Q9Y2R9 242 aaKnown RBP11.12□□□□□ -0.63
HDAC4-205ENST00000454542 FBXO7Q9Y3I1 522 aa11.12□□□□□ -0.63
HDAC4-205ENST00000454542 DNAH3Q8TD57 4116 aa11.11□□□□□ -0.63
HDAC4-205ENST00000454542 SRRM4A7MD48 611 aaKnown RBP11.11□□□□□ -0.63
HDAC4-205ENST00000454542 J3QRK9 145 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms