RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 A0A087WUJ7 227 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 TRAV8-3A0A0A6YYJ7 113 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 IGHV2-26A0A0B4J1V2 119 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 CIB4A0PJX0 185 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 FAM159BA6NKW6 160 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 ZNF729A6NN14 1252 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 BTNL10A8MVZ5 291 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 KLLNB2CW77 178 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 TRIM49D1C9J1S8 452 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 TSTD3H0UI37 97 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 FFAR1O14842 300 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 MMP23AO75900 390 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 ARL6IP5O75915 188 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 ATG12O94817 140 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 LY6G6DO95868 133 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 IGKV3-15P01624 115 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 IGHG2P01859 326 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 HBZP02008 142 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 KRTAP1-4P0C5Y4 121 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 OR4A8P0C604 315 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 SCGB1A1P11684 91 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 KLK2P20151 261 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 GABRR1P24046 479 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 MNAT1P51948 309 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 TCTAP57738 103 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 RPL23P62829 140 aaKnown RBP2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 SMCO1Q147U7 214 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 CDK10Q15131 360 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 ARHGAP11BQ3KRB8 267 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 HES5Q5TA89 166 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 TEX36Q5VZQ5 186 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 GLYATQ6IB77 296 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 RNF165Q6ZSG1 346 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 Q6ZSR6 202 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 VN1R4Q7Z5H5 301 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 CAMK2N1Q7Z7J9 78 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 NAA40Q86UY6 237 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 UBALD2Q8IYN6 164 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 ORAOV1Q8WV07 137 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 TNFAIP8L1Q8WVP5 186 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 RASSF5Q8WWW0 418 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 ACY3Q96HD9 319 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 TIMM17AQ99595 171 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 HSD17B10Q99714 261 aaKnown RBP2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 PRSS27Q9BQR3 290 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 RTBDNQ9BSG5 229 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 ZNF430Q9H8G1 570 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 ERGIC3Q9Y282 383 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 PRELID3BQ9Y3B1 194 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 SMAD5-AS1Q9Y6J3 95 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 ENPP4Q9Y6X5 453 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 MIA3Q5JRA6 1907 aa2.62□□□□□ -1.99
HMGB1P15-201ENST00000453854 TP53BP1Q12888 1972 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 ZZEF1O43149 2961 aa2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 BPTFQ12830 3046 aa2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 IGKV1-27A0A075B6S5 117 aa2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 TRAV19A0A0A6YYK7 116 aa2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 C5orf49A4QMS7 147 aa2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 EVPLLA8MZ36 301 aa2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 ATP5G1P05496 136 aa2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 CYBAP13498 195 aa2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 IL9P15248 144 aa2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 CRISP2P16562 243 aa2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 ZBTB25P24278 435 aa2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 GADD45AP24522 165 aa2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 KRTAP5-9P26371 169 aa2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 RPL5P46777 297 aaKnown RBP2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 GZMMP51124 257 aa2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 GFERP55789 205 aa2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 TAS2R41P59536 307 aa2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 TIMM10P62072 90 aa2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 RPS24P62847 133 aaKnown RBP2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 REG3AQ06141 175 aa2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 SPCS2Q15005 226 aa2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 IRF4Q15306 451 aa2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 IL17AQ16552 155 aa2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 RNF212Q495C1 297 aa2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 UBE2NLQ5JXB2 153 aa2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 LCE3CQ5T5A8 94 aa2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 FAM78BQ5VT40 261 aa2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 TMEM215Q68D42 235 aa2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 ZNF550Q7Z398 422 aa2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 NEGR1Q7Z3B1 354 aa2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 TGIF2LYQ8IUE0 185 aa2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 DRAM1Q8N682 238 aa2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 OR51H1Q8NH63 302 aa2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 LINC01006Q8NI28 216 aa2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 ABHD3Q8WU67 409 aa2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 RPUSD4Q96CM3 377 aaKnown RBP2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 TMEM101Q96IK0 257 aa2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 KCNS1Q96KK3 526 aa2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 OR4K3Q96R72 315 aa2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 OR7D2Q96RA2 312 aa2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 AIF1LQ9BQI0 150 aa2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 ZNF2Q9BSG1 426 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 ZSCAN16Q9H4T2 348 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 SPANXA1Q9NS26 97 aa2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 TMEM216Q9P0N5 145 aa2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 FAM32AQ9Y421 112 aaKnown RBP2.61□□□□□ -1.99
HMGB1P15-201ENST00000453854 FANCMQ8IYD8 2048 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms