RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 IFNA6P05013 189 aa8.18□□□□□ -1.1
CCDC171-203ENST00000449575 ARG1P05089 322 aa8.18□□□□□ -1.1
CCDC171-203ENST00000449575 AKR1C4P17516 323 aa8.18□□□□□ -1.1
CCDC171-203ENST00000449575 CHATP28329 748 aa8.18□□□□□ -1.1
CCDC171-203ENST00000449575 TAGLN2P37802 199 aaKnown RBP8.18□□□□□ -1.1
CCDC171-203ENST00000449575 MDH2P40926 338 aaKnown RBP8.18□□□□□ -1.1
CCDC171-203ENST00000449575 LOXL1Q08397 574 aaPredicted RBP8.18□□□□□ -1.1
CCDC171-203ENST00000449575 PDCD1Q15116 288 aa8.18□□□□□ -1.1
CCDC171-203ENST00000449575 TEX36Q5VZQ5 186 aa8.18□□□□□ -1.1
CCDC171-203ENST00000449575 FAM166AQ6J272 317 aa8.18□□□□□ -1.1
CCDC171-203ENST00000449575 ACP7Q6ZNF0 438 aa8.18□□□□□ -1.1
CCDC171-203ENST00000449575 JAGN1Q8N5M9 183 aa8.18□□□□□ -1.1
CCDC171-203ENST00000449575 CCL13Q99616 98 aa8.18□□□□□ -1.1
CCDC171-203ENST00000449575 EIF5A2Q9GZV4 153 aaKnown RBP8.18□□□□□ -1.1
CCDC171-203ENST00000449575 HES4Q9HCC6 221 aa8.18□□□□□ -1.1
CCDC171-203ENST00000449575 CKLFQ9UBR5 152 aa8.18□□□□□ -1.1
CCDC171-203ENST00000449575 A0A1W2PPE2 198 aa8.17□□□□□ -1.1
CCDC171-203ENST00000449575 H0YIZ8 118 aa8.17□□□□□ -1.1
CCDC171-203ENST00000449575 PHF1O43189 567 aaPredicted RBP8.17□□□□□ -1.1
CCDC171-203ENST00000449575 KCNAB3O43448 404 aa8.17□□□□□ -1.1
CCDC171-203ENST00000449575 NXPH2O95156 264 aa8.17□□□□□ -1.1
CCDC171-203ENST00000449575 OR8U9P0C7N5 309 aa8.17□□□□□ -1.1
CCDC171-203ENST00000449575 PSG2P11465 335 aa8.17□□□□□ -1.1
CCDC171-203ENST00000449575 COTL1Q14019 142 aa8.17□□□□□ -1.1
CCDC171-203ENST00000449575 TMEM249Q2WGJ8 235 aa8.17□□□□□ -1.1
CCDC171-203ENST00000449575 FAM216BQ8N7L0 139 aa8.17□□□□□ -1.1
CCDC171-203ENST00000449575 Q8NFD4 153 aa8.17□□□□□ -1.1
CCDC171-203ENST00000449575 OR8U1Q8NH10 309 aa8.17□□□□□ -1.1
CCDC171-203ENST00000449575 YPEL4Q96NS1 127 aa8.17□□□□□ -1.1
CCDC171-203ENST00000449575 SCGB3A2Q96PL1 93 aa8.17□□□□□ -1.1
CCDC171-203ENST00000449575 SLC35B3Q9H1N7 401 aa8.17□□□□□ -1.1
CCDC171-203ENST00000449575 GSX1Q9H4S2 264 aaPredicted RBP8.17□□□□□ -1.1
CCDC171-203ENST00000449575 MEGF11A6BM72 1044 aa8.17□□□□□ -1.1
CCDC171-203ENST00000449575 IFNL4K9M1U5 179 aa8.17□□□□□ -1.1
CCDC171-203ENST00000449575 RAB27BO00194 218 aa8.17□□□□□ -1.1
CCDC171-203ENST00000449575 CSN2P05814 226 aa8.17□□□□□ -1.1
CCDC171-203ENST00000449575 FGF7P21781 194 aa8.17□□□□□ -1.1
CCDC171-203ENST00000449575 ZFP36P26651 326 aaKnown RBP8.17□□□□□ -1.1
CCDC171-203ENST00000449575 CLINT1Q14677 625 aa8.17□□□□□ -1.1
CCDC171-203ENST00000449575 ZNF674Q2M3X9 581 aa8.17□□□□□ -1.1
CCDC171-203ENST00000449575 TMEM128Q5BJH2 165 aa8.17□□□□□ -1.1
CCDC171-203ENST00000449575 TMEM268Q5VZI3 342 aa8.17□□□□□ -1.1
CCDC171-203ENST00000449575 STUMQ69YW2 141 aa8.17□□□□□ -1.1
CCDC171-203ENST00000449575 RPL7L1Q6DKI1 246 aaKnown RBP8.17□□□□□ -1.1
CCDC171-203ENST00000449575 Q71RC1 249 aaPredicted RBP8.17□□□□□ -1.1
CCDC171-203ENST00000449575 CD177Q8N6Q3 437 aa8.17□□□□□ -1.1
CCDC171-203ENST00000449575 LFNGQ8NES3 379 aa8.17□□□□□ -1.1
CCDC171-203ENST00000449575 CD300LFQ8TDQ1 290 aa8.17□□□□□ -1.1
CCDC171-203ENST00000449575 C18orf12Q96KH6 178 aa8.17□□□□□ -1.1
CCDC171-203ENST00000449575 C2orf50Q96LR7 162 aa8.17□□□□□ -1.1
CCDC171-203ENST00000449575 C1orf147Q96MC9 270 aaPredicted RBP8.17□□□□□ -1.1
CCDC171-203ENST00000449575 NDUFAF3Q9BU61 184 aa8.17□□□□□ -1.1
CCDC171-203ENST00000449575 C20orf24Q9BUV8 137 aa8.17□□□□□ -1.1
CCDC171-203ENST00000449575 ZNF665Q9H7R5 613 aa8.17□□□□□ -1.1
CCDC171-203ENST00000449575 OR14J1Q9UGF5 321 aa8.17□□□□□ -1.1
CCDC171-203ENST00000449575 POLDIP2Q9Y2S7 368 aa8.17□□□□□ -1.1
CCDC171-203ENST00000449575 MSGN1A6NI15 193 aa8.16□□□□□ -1.1
CCDC171-203ENST00000449575 TMPRSS2O15393 492 aa8.16□□□□□ -1.1
CCDC171-203ENST00000449575 SCGNO76038 276 aa8.16□□□□□ -1.1
CCDC171-203ENST00000449575 PMP2P02689 132 aa8.16□□□□□ -1.1
CCDC171-203ENST00000449575 WNT2P09544 360 aa8.16□□□□□ -1.1
CCDC171-203ENST00000449575 IGHV4-31P0DP07 118 aa8.16□□□□□ -1.1
CCDC171-203ENST00000449575 CD99P14209 185 aa8.16□□□□□ -1.1
CCDC171-203ENST00000449575 RAB6AP20340 208 aa8.16□□□□□ -1.1
CCDC171-203ENST00000449575 TMEM155Q4W5P6 130 aa8.16□□□□□ -1.1
CCDC171-203ENST00000449575 ZNF841Q6ZN19 808 aa8.16□□□□□ -1.1
CCDC171-203ENST00000449575 HIST3H2BBQ8N257 126 aa8.16□□□□□ -1.1
CCDC171-203ENST00000449575 ZNRF1Q8ND25 227 aa8.16□□□□□ -1.1
CCDC171-203ENST00000449575 MSI2Q96DH6 328 aaKnown RBP8.16□□□□□ -1.1
CCDC171-203ENST00000449575 ELL3Q9HB65 397 aaPredicted RBP8.16□□□□□ -1.1
CCDC171-203ENST00000449575 PATZ1Q9HBE1 687 aaKnown RBP8.16□□□□□ -1.1
CCDC171-203ENST00000449575 C19orf12Q9NSK7 152 aa8.16□□□□□ -1.1
CCDC171-203ENST00000449575 A0A087WWC5 75 aa8.16□□□□□ -1.1
CCDC171-203ENST00000449575 TRAV38-1A0A0B4J264 116 aa8.16□□□□□ -1.1
CCDC171-203ENST00000449575 A0A1B0GW64 132 aa8.16□□□□□ -1.1
CCDC171-203ENST00000449575 TRAPPC2LH3BP13 241 aa8.16□□□□□ -1.1
CCDC171-203ENST00000449575 ADAM20O43506 726 aa8.16□□□□□ -1.1
CCDC171-203ENST00000449575 GABRA2P47869 451 aa8.16□□□□□ -1.1
CCDC171-203ENST00000449575 MOGAT2Q3SYC2 334 aa8.16□□□□□ -1.1
CCDC171-203ENST00000449575 CDPF1Q6NVV7 123 aa8.16□□□□□ -1.1
CCDC171-203ENST00000449575 MKXQ8IYA7 352 aa8.16□□□□□ -1.1
CCDC171-203ENST00000449575 EMG1Q92979 244 aaKnown RBP8.16□□□□□ -1.1
CCDC171-203ENST00000449575 GAFA1Q96PS6 74 aa8.16□□□□□ -1.1
CCDC171-203ENST00000449575 OR5AC2Q9NZP5 309 aa8.16□□□□□ -1.1
CCDC171-203ENST00000449575 STRAPQ9Y3F4 350 aaKnown RBP8.16□□□□□ -1.1
CCDC171-203ENST00000449575 SMCO3A2RU48 225 aa8.16□□□□□ -1.1
CCDC171-203ENST00000449575 MBP02144 154 aa8.16□□□□□ -1.1
CCDC171-203ENST00000449575 PF4V1P10720 104 aa8.16□□□□□ -1.1
CCDC171-203ENST00000449575 LCN2P80188 198 aa8.16□□□□□ -1.1
CCDC171-203ENST00000449575 PIGYQ3MUY2 71 aa8.16□□□□□ -1.1
CCDC171-203ENST00000449575 SLC22A6Q4U2R8 563 aa8.16□□□□□ -1.1
CCDC171-203ENST00000449575 MIDNQ504T8 468 aa8.16□□□□□ -1.1
CCDC171-203ENST00000449575 AKR1C8PQ5T2L2 129 aa8.16□□□□□ -1.1
CCDC171-203ENST00000449575 FAM58AQ8N1B3 248 aa8.16□□□□□ -1.1
CCDC171-203ENST00000449575 ADAD2Q8NCV1 583 aaKnown RBP8.16□□□□□ -1.1
CCDC171-203ENST00000449575 TMEM104Q8NE00 496 aa8.16□□□□□ -1.1
CCDC171-203ENST00000449575 PRO1933Q9H354 126 aa8.16□□□□□ -1.1
CCDC171-203ENST00000449575 SIRT7Q9NRC8 400 aa8.16□□□□□ -1.1
CCDC171-203ENST00000449575 MRPS28Q9Y2Q9 187 aaKnown RBP8.16□□□□□ -1.1
CCDC171-203ENST00000449575 FN1P02751 2386 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms