RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 IGKV1D-42A0A075B6H8 117 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 OR11H12B2RN74 326 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 C19orf84I3L1E1 186 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 ISLRO14498 428 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 TCAPO15273 167 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 IGHV4-39P01824 125 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 SLC25A6P12236 298 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 NTF3P20783 257 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 RPS25P62851 125 aaKnown RBP4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 KLRD1Q13241 179 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 RBMS2Q15434 407 aaKnown RBP4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 FFAR4Q5NUL3 377 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 SAPCD1Q5SSQ6 148 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 LRP11Q86VZ4 500 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 IGKV3OR2-268A0A0C4DH90 116 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 CCL24O00175 119 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 OR2A4O95047 310 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 HBE1P02100 147 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 AADACP22760 399 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 FCGR2CP31995 323 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 GALR1P47211 349 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 CEBPDP49716 269 aaPredicted RBP4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 EGR4Q05215 589 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 LYPD4Q6UWN0 246 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 OR2A7Q96R45 310 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 RANGRFQ9HD47 186 aaPredicted RBP4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 HMGA2P52926 109 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 BAXQ07812 192 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 IL24Q13007 206 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 TTC32Q5I0X7 151 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 METAP1DQ6UB28 335 aaPredicted RBP4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 CD300LDQ6UXZ3 194 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 MMD2Q8IY49 270 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 RNF141Q8WVD5 230 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 ZNF837Q96EG3 531 aaPredicted RBP4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 LHFPL6Q9Y693 200 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 A0A1B0GU03 582 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 TMEM178BH3BS89 294 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 CD81P60033 236 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 COL5A1-AS1Q5SY13 56 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 APH1BQ8WW43 257 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 RBFOX1Q9NWB1 397 aaKnown RBP4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 DSPPQ9NZW4 1301 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 CGB1A6NKQ9 187 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 ZNF815PA8K554 130 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 RAMP3O60896 148 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 TSPOP30536 169 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 PMELP40967 661 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 HTD2P86397 168 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 HERPUD1Q15011 391 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 TBCEQ15813 527 aaPredicted RBP4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 PRSS53Q2L4Q9 553 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 ZNF767PQ75MW2 155 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 OR1N2Q8NGR9 330 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 C10orf105Q8TEF2 133 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 FAM206AQ9NX38 181 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 COX11Q9Y6N1 276 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 WDR87Q6ZQQ6 2873 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 ADAM10O14672 748 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 TSPAN15O95858 294 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 RPL27AP46776 148 aaKnown RBP4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 SMN1Q16637 294 aaKnown RBP4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 UBE2NLQ5JXB2 153 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 PRR31Q5SQ13 230 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 OR2W3Q7Z3T1 314 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 COMMD7Q86VX2 200 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 LGI3Q8N145 548 aa4.72□□□□□ -1.65
CDC42BPA-209ENST00000448940 DHRS7CA6NNS2 312 aa4.71□□□□□ -1.65
CDC42BPA-209ENST00000448940 RGS13O14921 159 aa4.71□□□□□ -1.65
CDC42BPA-209ENST00000448940 HOXD3P31249 432 aaPredicted RBP4.71□□□□□ -1.65
CDC42BPA-209ENST00000448940 SAA4P35542 130 aa4.71□□□□□ -1.65
CDC42BPA-209ENST00000448940 CD200P41217 278 aa4.71□□□□□ -1.65
CDC42BPA-209ENST00000448940 ENDOGQ14249 297 aaKnown RBP4.71□□□□□ -1.65
CDC42BPA-209ENST00000448940 MBNL2Q5VZF2 373 aaKnown RBP4.71□□□□□ -1.65
CDC42BPA-209ENST00000448940 AMMECR1LQ6DCA0 310 aa4.71□□□□□ -1.65
CDC42BPA-209ENST00000448940 OR4D11Q8NGI4 311 aa4.71□□□□□ -1.65
CDC42BPA-209ENST00000448940 DUX3Q96PT4 197 aa4.71□□□□□ -1.65
CDC42BPA-209ENST00000448940 NRN1Q9NPD7 142 aa4.71□□□□□ -1.65
CDC42BPA-209ENST00000448940 NUDT15Q9NV35 164 aa4.71□□□□□ -1.65
CDC42BPA-209ENST00000448940 IGHV1-69DA0A0B4J2H0 117 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 IGLL5B9A064 214 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 F5H768 121 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 GPX5O75715 221 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 CST4P01036 141 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 IGHV1-69P01742 117 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 IL5P05113 134 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 FGF2P09038 288 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 FAM3AP98173 230 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 OR8G2PQ6IF36 304 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 OR51A4Q8NGJ6 313 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 NPDC1Q9NQX5 325 aaPredicted RBP4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 KLF4O43474 513 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 OR2H2O95918 312 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 LOXL1Q08397 574 aaPredicted RBP4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 LGALS14Q8TCE9 139 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 CDCA4Q9BXL8 241 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 TAS2R3Q9NYW6 316 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 RPUSD1Q9UJJ7 312 aaKnown RBP4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 LINC00312Q9Y6C7 94 aa4.71□□□□□ -1.66
CDC42BPA-209ENST00000448940 TRBV5-3A0A0A0MS03 114 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms