RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 TSNAXQ99598 290 aaKnown RBP14.04□□□□□ -0.16
COL9A1-205ENST00000447041 ACOT13Q9NPJ3 140 aa14.04□□□□□ -0.16
COL9A1-205ENST00000447041 ARPC1BO15143 372 aaKnown RBP14.03□□□□□ -0.16
COL9A1-205ENST00000447041 BET1O15155 118 aa14.03□□□□□ -0.16
COL9A1-205ENST00000447041 FABP7O15540 132 aa14.03□□□□□ -0.16
COL9A1-205ENST00000447041 SLC25A17O43808 307 aa14.03□□□□□ -0.16
COL9A1-205ENST00000447041 FCGR3AP08637 254 aa14.03□□□□□ -0.16
COL9A1-205ENST00000447041 SPNP16150 400 aa14.03□□□□□ -0.16
COL9A1-205ENST00000447041 OR10A3P58181 314 aa14.03□□□□□ -0.16
COL9A1-205ENST00000447041 SSBP2P81877 361 aaPredicted RBP14.03□□□□□ -0.16
COL9A1-205ENST00000447041 TBCEQ15813 527 aaPredicted RBP14.03□□□□□ -0.16
COL9A1-205ENST00000447041 IGSF11Q5DX21 431 aa14.03□□□□□ -0.16
COL9A1-205ENST00000447041 OR4A4PQ8NGN8 299 aa14.03□□□□□ -0.16
COL9A1-205ENST00000447041 GRPEL2Q8TAA5 225 aa14.03□□□□□ -0.16
COL9A1-205ENST00000447041 MAFIPQ8WZ33 124 aa14.03□□□□□ -0.16
COL9A1-205ENST00000447041 OR2D2Q9H210 308 aa14.03□□□□□ -0.16
COL9A1-205ENST00000447041 SLC35D1Q9NTN3 355 aa14.03□□□□□ -0.16
COL9A1-205ENST00000447041 RAB22AQ9UL26 194 aa14.03□□□□□ -0.16
COL9A1-205ENST00000447041 SMAD5-AS1Q9Y6J3 95 aa14.03□□□□□ -0.16
COL9A1-205ENST00000447041 TENM3Q9P273 2699 aa14.03□□□□□ -0.16
COL9A1-205ENST00000447041 GSTT2P0CG29 244 aa14.02□□□□□ -0.17
COL9A1-205ENST00000447041 GSTT2BP0CG30 244 aa14.02□□□□□ -0.17
COL9A1-205ENST00000447041 ACSM6Q6P461 480 aa14.02□□□□□ -0.17
COL9A1-205ENST00000447041 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.02□□□□□ -0.17
COL9A1-205ENST00000447041 FLYWCH2Q96CP2 140 aaKnown RBP14.02□□□□□ -0.17
COL9A1-205ENST00000447041 RAB3CQ96E17 227 aa14.02□□□□□ -0.17
COL9A1-205ENST00000447041 C5orf30Q96GV9 206 aa14.02□□□□□ -0.17
COL9A1-205ENST00000447041 CNBD2Q96M20 576 aa14.02□□□□□ -0.17
COL9A1-205ENST00000447041 CABLES2Q9BTV7 478 aa14.02□□□□□ -0.17
COL9A1-205ENST00000447041 SDHAF2Q9NX18 166 aa14.02□□□□□ -0.17
COL9A1-205ENST00000447041 A0A075B6Q4 140 aa14.01□□□□□ -0.17
COL9A1-205ENST00000447041 IGLV2-23P01705 113 aa14.01□□□□□ -0.17
COL9A1-205ENST00000447041 TRGV3P03979 118 aa14.01□□□□□ -0.17
COL9A1-205ENST00000447041 HSPB1P04792 205 aaKnown RBP14.01□□□□□ -0.17
COL9A1-205ENST00000447041 OR8U9P0C7N5 309 aa14.01□□□□□ -0.17
COL9A1-205ENST00000447041 GNB3P16520 340 aa14.01□□□□□ -0.17
COL9A1-205ENST00000447041 SERPINB10P48595 397 aa14.01□□□□□ -0.17
COL9A1-205ENST00000447041 MRPS15P82914 257 aaKnown RBP14.01□□□□□ -0.17
COL9A1-205ENST00000447041 FXYD3Q14802 87 aa14.01□□□□□ -0.17
COL9A1-205ENST00000447041 IZUMO2Q6UXV1 221 aa14.01□□□□□ -0.17
COL9A1-205ENST00000447041 ZNF367Q7RTV3 350 aa14.01□□□□□ -0.17
COL9A1-205ENST00000447041 RHOVQ96L33 236 aa14.01□□□□□ -0.17
COL9A1-205ENST00000447041 SLA2Q9H6Q3 261 aa14.01□□□□□ -0.17
COL9A1-205ENST00000447041 ZNF230Q9UIE0 474 aaPredicted RBP14.01□□□□□ -0.17
COL9A1-205ENST00000447041 A0A0B4J203 849 aa14□□□□□ -0.17
COL9A1-205ENST00000447041 MFNGO00587 321 aa14□□□□□ -0.17
COL9A1-205ENST00000447041 GP9P14770 177 aa14□□□□□ -0.17
COL9A1-205ENST00000447041 CD40LGP29965 261 aa14□□□□□ -0.17
COL9A1-205ENST00000447041 PSMD7P51665 324 aa14□□□□□ -0.17
COL9A1-205ENST00000447041 PITPNAQ00169 270 aa14□□□□□ -0.17
COL9A1-205ENST00000447041 PJVKQ0ZLH3 352 aa14□□□□□ -0.17
COL9A1-205ENST00000447041 HAPLN4Q86UW8 402 aa14□□□□□ -0.17
COL9A1-205ENST00000447041 OR10R2Q8NGX6 335 aa14□□□□□ -0.17
COL9A1-205ENST00000447041 HARBI1Q96MB7 349 aa14□□□□□ -0.17
COL9A1-205ENST00000447041 TRBV6-7A0A0A0MS04 114 aa13.99□□□□□ -0.17
COL9A1-205ENST00000447041 TRAV1-2A0A0B4J238 106 aa13.99□□□□□ -0.17
COL9A1-205ENST00000447041 IFITM5A6NNB3 132 aa13.99□□□□□ -0.17
COL9A1-205ENST00000447041 RAB27BO00194 218 aa13.99□□□□□ -0.17
COL9A1-205ENST00000447041 PDCD5O14737 125 aa13.99□□□□□ -0.17
COL9A1-205ENST00000447041 CRYGBP07316 175 aa13.99□□□□□ -0.17
COL9A1-205ENST00000447041 RANBP1P43487 201 aa13.99□□□□□ -0.17
COL9A1-205ENST00000447041 DEFA5Q01523 94 aa13.99□□□□□ -0.17
COL9A1-205ENST00000447041 OVCH2Q7RTZ1 564 aa13.99□□□□□ -0.17
COL9A1-205ENST00000447041 POC5Q8NA72 575 aa13.99□□□□□ -0.17
COL9A1-205ENST00000447041 OR5T1Q8NG75 326 aa13.99□□□□□ -0.17
COL9A1-205ENST00000447041 OR6Q1Q8NGQ2 317 aa13.99□□□□□ -0.17
COL9A1-205ENST00000447041 OR10J5Q8NHC4 309 aa13.99□□□□□ -0.17
COL9A1-205ENST00000447041 ZNF355PQ9NSJ1 428 aa13.99□□□□□ -0.17
COL9A1-205ENST00000447041 NDUFB11Q9NX14 153 aa13.99□□□□□ -0.17
COL9A1-205ENST00000447041 TRIM64CA6NLI5 447 aa13.98□□□□□ -0.17
COL9A1-205ENST00000447041 CNIH1O95406 144 aa13.98□□□□□ -0.17
COL9A1-205ENST00000447041 HIST1H1DP16402 221 aaKnown RBP13.98□□□□□ -0.17
COL9A1-205ENST00000447041 GADD45AP24522 165 aa13.98□□□□□ -0.17
COL9A1-205ENST00000447041 MYL9P24844 172 aa13.98□□□□□ -0.17
COL9A1-205ENST00000447041 NR2C2APQ86WQ0 139 aa13.98□□□□□ -0.17
COL9A1-205ENST00000447041 SBSPONQ8IVN8 264 aa13.98□□□□□ -0.17
COL9A1-205ENST00000447041 BVESQ8NE79 360 aa13.98□□□□□ -0.17
COL9A1-205ENST00000447041 VCX3BQ9H321 246 aa13.98□□□□□ -0.17
COL9A1-205ENST00000447041 ELF5Q9UKW6 265 aaPredicted RBP13.98□□□□□ -0.17
COL9A1-205ENST00000447041 IGKV1D-8A0A087WSZ0 117 aa13.97□□□□□ -0.17
COL9A1-205ENST00000447041 SMIM30A4D0T7 59 aa13.97□□□□□ -0.17
COL9A1-205ENST00000447041 SRRM4A7MD48 611 aaKnown RBP13.97□□□□□ -0.17
COL9A1-205ENST00000447041 RAB3BP20337 219 aa13.97□□□□□ -0.17
COL9A1-205ENST00000447041 RAB6AP20340 208 aa13.97□□□□□ -0.17
COL9A1-205ENST00000447041 HSPA13P48723 471 aa13.97□□□□□ -0.17
COL9A1-205ENST00000447041 OR4C12Q96R67 309 aa13.97□□□□□ -0.17
COL9A1-205ENST00000447041 BLOC1S6Q9UL45 172 aa13.97□□□□□ -0.17
COL9A1-205ENST00000447041 SORL1Q92673 2214 aa13.96□□□□□ -0.17
COL9A1-205ENST00000447041 C13orf42A0A1B0GVH6 325 aa13.96□□□□□ -0.17
COL9A1-205ENST00000447041 TRDV1A0A1B0GX56 115 aa13.96□□□□□ -0.17
COL9A1-205ENST00000447041 H3BUA1 57 aa13.96□□□□□ -0.17
COL9A1-205ENST00000447041 SHOXO15266 292 aa13.96□□□□□ -0.17
COL9A1-205ENST00000447041 DIRAS3O95661 229 aa13.96□□□□□ -0.17
COL9A1-205ENST00000447041 FRMD6-AS1P0C7T7 363 aa13.96□□□□□ -0.17
COL9A1-205ENST00000447041 LGALS7P47929 136 aa13.96□□□□□ -0.17
COL9A1-205ENST00000447041 SRSF7Q16629 238 aaKnown RBP eCLIP13.96□□□□□ -0.17
COL9A1-205ENST00000447041 MRGPRG-AS1Q2M3A8 158 aa13.96□□□□□ -0.17
COL9A1-205ENST00000447041 TMEM177Q53S58 311 aa13.96□□□□□ -0.17
COL9A1-205ENST00000447041 C22orf42Q6IC83 251 aa13.96□□□□□ -0.17
COL9A1-205ENST00000447041 GINS4Q9BRT9 223 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms