RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 HEPN1Q6WQI6 88 aa9.03□□□□□ -0.96
TOP3B-210ENST00000444502 ZNF596Q8TC21 504 aa9.03□□□□□ -0.96
TOP3B-210ENST00000444502 NABP1Q96AH0 204 aa9.03□□□□□ -0.96
TOP3B-210ENST00000444502 ARV1Q9H2C2 271 aa9.03□□□□□ -0.96
TOP3B-210ENST00000444502 IL36RNQ9UBH0 155 aa9.03□□□□□ -0.96
TOP3B-210ENST00000444502 hADV38S2A0JD32 116 aa9.03□□□□□ -0.96
TOP3B-210ENST00000444502 GYPAP02724 150 aa9.03□□□□□ -0.96
TOP3B-210ENST00000444502 IGHV1-2P23083 117 aa9.03□□□□□ -0.96
TOP3B-210ENST00000444502 HBG1P69891 147 aa9.03□□□□□ -0.96
TOP3B-210ENST00000444502 HBG2P69892 147 aa9.03□□□□□ -0.96
TOP3B-210ENST00000444502 TESK1Q15569 626 aa9.03□□□□□ -0.96
TOP3B-210ENST00000444502 RTL8BQ17RB0 113 aa9.03□□□□□ -0.96
TOP3B-210ENST00000444502 PARP11Q9NR21 331 aa9.03□□□□□ -0.96
TOP3B-210ENST00000444502 LIN7CQ9NUP9 197 aaKnown RBP9.03□□□□□ -0.96
TOP3B-210ENST00000444502 ZNF581Q9P0T4 197 aa9.03□□□□□ -0.96
TOP3B-210ENST00000444502 RPL36A-HNRNPH2H7BZ11 118 aa9.02□□□□□ -0.96
TOP3B-210ENST00000444502 CD8AP01732 235 aa9.02□□□□□ -0.96
TOP3B-210ENST00000444502 REG1BP48304 166 aa9.02□□□□□ -0.96
TOP3B-210ENST00000444502 RAB7AP51149 207 aa9.02□□□□□ -0.96
TOP3B-210ENST00000444502 TMEM267Q0VDI3 215 aaPredicted RBP9.02□□□□□ -0.96
TOP3B-210ENST00000444502 RPEQ96AT9 228 aa9.02□□□□□ -0.96
TOP3B-210ENST00000444502 GALNT14Q96FL9 552 aa9.02□□□□□ -0.96
TOP3B-210ENST00000444502 RTBDNQ9BSG5 229 aaPredicted RBP9.02□□□□□ -0.96
TOP3B-210ENST00000444502 SFXN3Q9BWM7 321 aa9.02□□□□□ -0.96
TOP3B-210ENST00000444502 CLN8Q9UBY8 286 aa9.02□□□□□ -0.96
TOP3B-210ENST00000444502 hCG_38984A0A1B0GV85 526 aa9.02□□□□□ -0.97
TOP3B-210ENST00000444502 SULT1A2P50226 295 aa9.02□□□□□ -0.97
TOP3B-210ENST00000444502 CEACAM21Q3KPI0 293 aa9.02□□□□□ -0.97
TOP3B-210ENST00000444502 RNFT1Q5M7Z0 435 aa9.02□□□□□ -0.97
TOP3B-210ENST00000444502 FAM201AQ5SY85 155 aa9.02□□□□□ -0.97
TOP3B-210ENST00000444502 BTF3L4Q96K17 158 aa9.02□□□□□ -0.97
TOP3B-210ENST00000444502 FAM103A1Q9BTL3 118 aaKnown RBP9.02□□□□□ -0.97
TOP3B-210ENST00000444502 TRDCB7Z8K6 153 aa9.02□□□□□ -0.97
TOP3B-210ENST00000444502 SCGB2A1O75556 95 aa9.02□□□□□ -0.97
TOP3B-210ENST00000444502 NAAAQ02083 359 aa9.02□□□□□ -0.97
TOP3B-210ENST00000444502 TBR1Q16650 682 aa9.02□□□□□ -0.97
TOP3B-210ENST00000444502 COL5A1-AS1Q5SY13 56 aa9.02□□□□□ -0.97
TOP3B-210ENST00000444502 ABLIM2Q6H8Q1 611 aa9.02□□□□□ -0.97
TOP3B-210ENST00000444502 C5orf24Q7Z6I8 188 aa9.02□□□□□ -0.97
TOP3B-210ENST00000444502 GGNQ86UU5 652 aa9.02□□□□□ -0.97
TOP3B-210ENST00000444502 FAM57AQ8TBR7 257 aa9.02□□□□□ -0.97
TOP3B-210ENST00000444502 ZDHHC16Q969W1 377 aa9.02□□□□□ -0.97
TOP3B-210ENST00000444502 CYYR1Q96J86 154 aa9.02□□□□□ -0.97
TOP3B-210ENST00000444502 VAMP8Q9BV40 100 aa9.02□□□□□ -0.97
TOP3B-210ENST00000444502 PARD6GQ9BYG4 376 aaPredicted RBP9.02□□□□□ -0.97
TOP3B-210ENST00000444502 CACNG5Q9UF02 275 aa9.02□□□□□ -0.97
TOP3B-210ENST00000444502 ADAMTS9Q9P2N4 1935 aa9.02□□□□□ -0.97
TOP3B-210ENST00000444502 IFITM10A6NMD0 228 aa9.02□□□□□ -0.97
TOP3B-210ENST00000444502 TDGF1P3P51864 188 aa9.02□□□□□ -0.97
TOP3B-210ENST00000444502 RPL31P62899 125 aaKnown RBP9.02□□□□□ -0.97
TOP3B-210ENST00000444502 IZUMO4Q1ZYL8 232 aa9.02□□□□□ -0.97
TOP3B-210ENST00000444502 CYB561D1Q8N8Q1 229 aa9.02□□□□□ -0.97
TOP3B-210ENST00000444502 MSI2Q96DH6 328 aaKnown RBP9.02□□□□□ -0.97
TOP3B-210ENST00000444502 MALSU1Q96EH3 234 aa9.02□□□□□ -0.97
TOP3B-210ENST00000444502 DLL3Q9NYJ7 618 aa9.02□□□□□ -0.97
TOP3B-210ENST00000444502 KIAA1456Q9P272 454 aa9.02□□□□□ -0.97
TOP3B-210ENST00000444502 FOXD3Q9UJU5 478 aaPredicted RBP9.02□□□□□ -0.97
TOP3B-210ENST00000444502 CLDN34H7C241 214 aa9.01□□□□□ -0.97
TOP3B-210ENST00000444502 CHST1O43916 411 aa9.01□□□□□ -0.97
TOP3B-210ENST00000444502 TMEM230Q96A57 120 aa9.01□□□□□ -0.97
TOP3B-210ENST00000444502 PCGF1Q9BSM1 259 aa9.01□□□□□ -0.97
TOP3B-210ENST00000444502 SLC39A9Q9NUM3 307 aa9.01□□□□□ -0.97
TOP3B-210ENST00000444502 PSENENQ9NZ42 101 aa9.01□□□□□ -0.97
TOP3B-210ENST00000444502 FUT9Q9Y231 359 aa9.01□□□□□ -0.97
TOP3B-210ENST00000444502 SSUH2Q9Y2M2 353 aa9.01□□□□□ -0.97
TOP3B-210ENST00000444502 ZG16O60844 167 aa9.01□□□□□ -0.97
TOP3B-210ENST00000444502 GZMBP10144 247 aa9.01□□□□□ -0.97
TOP3B-210ENST00000444502 ERVFC1-1P60608 527 aa9.01□□□□□ -0.97
TOP3B-210ENST00000444502 JOSD1Q15040 202 aaPredicted RBP9.01□□□□□ -0.97
TOP3B-210ENST00000444502 PRR30Q53SZ7 412 aaPredicted RBP9.01□□□□□ -0.97
TOP3B-210ENST00000444502 RBMXL3Q8N7X1 1067 aaKnown RBP9.01□□□□□ -0.97
TOP3B-210ENST00000444502 R3HDM4Q96D70 268 aa9.01□□□□□ -0.97
TOP3B-210ENST00000444502 RNF115Q9Y4L5 304 aa9.01□□□□□ -0.97
TOP3B-210ENST00000444502 POMT1Q9Y6A1 747 aa9.01□□□□□ -0.97
TOP3B-210ENST00000444502 FASNP49327 2511 aaKnown RBP9.01□□□□□ -0.97
TOP3B-210ENST00000444502 WNT9BO14905 357 aa9.01□□□□□ -0.97
TOP3B-210ENST00000444502 MT-CO2P00403 227 aa9.01□□□□□ -0.97
TOP3B-210ENST00000444502 IFNA1P01562 189 aa9.01□□□□□ -0.97
TOP3B-210ENST00000444502 APELAP0DMC3 54 aa9.01□□□□□ -0.97
TOP3B-210ENST00000444502 CCL1P22362 96 aa9.01□□□□□ -0.97
TOP3B-210ENST00000444502 PRDX2P32119 198 aa9.01□□□□□ -0.97
TOP3B-210ENST00000444502 PMELP40967 661 aa9.01□□□□□ -0.97
TOP3B-210ENST00000444502 WNT5AP41221 380 aa9.01□□□□□ -0.97
TOP3B-210ENST00000444502 MST1LQ2TV78 715 aa9.01□□□□□ -0.97
TOP3B-210ENST00000444502 OR1L6Q8NGR2 347 aa9.01□□□□□ -0.97
TOP3B-210ENST00000444502 CIB3Q96Q77 187 aaPredicted RBP9.01□□□□□ -0.97
TOP3B-210ENST00000444502 GNB4Q9HAV0 340 aa9.01□□□□□ -0.97
TOP3B-210ENST00000444502 PROK2Q9HC23 129 aa9.01□□□□□ -0.97
TOP3B-210ENST00000444502 PPIAL4AQ9Y536 164 aa9.01□□□□□ -0.97
TOP3B-210ENST00000444502 TIMM8BQ9Y5J9 83 aaPredicted RBP9.01□□□□□ -0.97
TOP3B-210ENST00000444502 PPIAL4EA0A075B759 164 aa9□□□□□ -0.97
TOP3B-210ENST00000444502 IGKV1-12A0A0C4DH73 117 aa9□□□□□ -0.97
TOP3B-210ENST00000444502 PPIAL4DF5H284 164 aa9□□□□□ -0.97
TOP3B-210ENST00000444502 H0YIZ8 118 aa9□□□□□ -0.97
TOP3B-210ENST00000444502 HMGB3O15347 200 aaKnown RBP9□□□□□ -0.97
TOP3B-210ENST00000444502 IGKV1D-12P01611 117 aa9□□□□□ -0.97
TOP3B-210ENST00000444502 PPIAL4FP0DN26 164 aa9□□□□□ -0.97
TOP3B-210ENST00000444502 FGF12P61328 243 aa9□□□□□ -0.97
TOP3B-210ENST00000444502 RPL11P62913 178 aaKnown RBP9□□□□□ -0.97
TOP3B-210ENST00000444502 COL10A1Q03692 680 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms