RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 DMRT1Q9Y5R6 373 aa10.79□□□□□ -0.68
HMGN1-208ENST00000443046 DNAH2Q9P225 4427 aa10.79□□□□□ -0.68
HMGN1-208ENST00000443046 TRBV6-6A0A0A6YYG2 114 aa10.78□□□□□ -0.68
HMGN1-208ENST00000443046 A0A0B4J203 849 aa10.78□□□□□ -0.68
HMGN1-208ENST00000443046 A0A1W2PPK0 400 aa10.78□□□□□ -0.68
HMGN1-208ENST00000443046 DCKP27707 260 aa10.78□□□□□ -0.68
HMGN1-208ENST00000443046 CEACAM6P40199 344 aa10.78□□□□□ -0.68
HMGN1-208ENST00000443046 PMS2P11Q13670 270 aa10.78□□□□□ -0.68
HMGN1-208ENST00000443046 C6orf201Q7Z4U5 140 aa10.78□□□□□ -0.68
HMGN1-208ENST00000443046 EDARADDQ8WWZ3 215 aa10.78□□□□□ -0.68
HMGN1-208ENST00000443046 NEDD4LQ96PU5 975 aa10.78□□□□□ -0.68
HMGN1-208ENST00000443046 TECRQ9NZ01 308 aaKnown RBP10.78□□□□□ -0.68
HMGN1-208ENST00000443046 OR1A1Q9P1Q5 309 aa10.78□□□□□ -0.68
HMGN1-208ENST00000443046 ZNF230Q9UIE0 474 aaPredicted RBP10.78□□□□□ -0.68
HMGN1-208ENST00000443046 DNAH17Q9UFH2 4485 aa10.78□□□□□ -0.68
HMGN1-208ENST00000443046 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.77□□□□□ -0.69
HMGN1-208ENST00000443046 TRBV9A0A0B4J1U6 114 aa10.77□□□□□ -0.69
HMGN1-208ENST00000443046 C2orf70A6NJV1 201 aa10.77□□□□□ -0.69
HMGN1-208ENST00000443046 WBP4O75554 376 aaKnown RBP10.77□□□□□ -0.69
HMGN1-208ENST00000443046 FOLR2P14207 255 aa10.77□□□□□ -0.69
HMGN1-208ENST00000443046 ATF4P18848 351 aaPredicted RBP10.77□□□□□ -0.69
HMGN1-208ENST00000443046 EDN2P20800 178 aa10.77□□□□□ -0.69
HMGN1-208ENST00000443046 ZBTB25P24278 435 aa10.77□□□□□ -0.69
HMGN1-208ENST00000443046 RPS27AP62979 156 aaKnown RBP10.77□□□□□ -0.69
HMGN1-208ENST00000443046 SMN1Q16637 294 aaKnown RBP10.77□□□□□ -0.69
HMGN1-208ENST00000443046 MOB1BQ7L9L4 216 aa10.77□□□□□ -0.69
HMGN1-208ENST00000443046 NKAIN3Q8N8D7 197 aa10.77□□□□□ -0.69
HMGN1-208ENST00000443046 WDR89Q96FK6 387 aaPredicted RBP10.77□□□□□ -0.69
HMGN1-208ENST00000443046 DERL3Q96Q80 235 aa10.77□□□□□ -0.69
HMGN1-208ENST00000443046 SLC29A1Q99808 456 aa10.77□□□□□ -0.69
HMGN1-208ENST00000443046 GGTLC1Q9BX51 225 aa10.77□□□□□ -0.69
HMGN1-208ENST00000443046 AKIP1Q9NQ31 210 aa10.77□□□□□ -0.69
HMGN1-208ENST00000443046 COA4Q9NYJ1 87 aa10.77□□□□□ -0.69
HMGN1-208ENST00000443046 A0A0J9YWU9 116 aa10.76□□□□□ -0.69
HMGN1-208ENST00000443046 FAM223BA6NKX1 122 aa10.76□□□□□ -0.69
HMGN1-208ENST00000443046 SRRM4A7MD48 611 aaKnown RBP10.76□□□□□ -0.69
HMGN1-208ENST00000443046 DEDDO75618 318 aa10.76□□□□□ -0.69
HMGN1-208ENST00000443046 APOA2P02652 100 aa10.76□□□□□ -0.69
HMGN1-208ENST00000443046 HTR2CP28335 458 aa10.76□□□□□ -0.69
HMGN1-208ENST00000443046 ZNF45Q02386 682 aa10.76□□□□□ -0.69
HMGN1-208ENST00000443046 GUCA2BQ16661 112 aa10.76□□□□□ -0.69
HMGN1-208ENST00000443046 LGALS9CQ6DKI2 356 aa10.76□□□□□ -0.69
HMGN1-208ENST00000443046 FAM223AQ8IWN6 122 aa10.76□□□□□ -0.69
HMGN1-208ENST00000443046 CBR4Q8N4T8 237 aa10.76□□□□□ -0.69
HMGN1-208ENST00000443046 KCTD12Q96CX2 325 aaKnown RBP10.76□□□□□ -0.69
HMGN1-208ENST00000443046 TM2D1Q9BX74 207 aa10.76□□□□□ -0.69
HMGN1-208ENST00000443046 CLEC2DQ9UHP7 191 aa10.76□□□□□ -0.69
HMGN1-208ENST00000443046 DIMT1Q9UNQ2 313 aaKnown RBP10.76□□□□□ -0.69
HMGN1-208ENST00000443046 DYNC1H1Q14204 4646 aaKnown RBP10.75□□□□□ -0.69
HMGN1-208ENST00000443046 LOC100130705A0A1B0GUX0 176 aa10.75□□□□□ -0.69
HMGN1-208ENST00000443046 MSGN1A6NI15 193 aa10.75□□□□□ -0.69
HMGN1-208ENST00000443046 LGALS9O00182 355 aa10.75□□□□□ -0.69
HMGN1-208ENST00000443046 OR9G9P0C7N8 305 aa10.75□□□□□ -0.69
HMGN1-208ENST00000443046 UBBP0CG47 229 aa10.75□□□□□ -0.69
HMGN1-208ENST00000443046 RHOGP84095 191 aa10.75□□□□□ -0.69
HMGN1-208ENST00000443046 TMEM177Q53S58 311 aa10.75□□□□□ -0.69
HMGN1-208ENST00000443046 OR10K2Q6IF99 312 aa10.75□□□□□ -0.69
HMGN1-208ENST00000443046 SLC16A13Q7RTY0 426 aa10.75□□□□□ -0.69
HMGN1-208ENST00000443046 KCNG3Q8TAE7 436 aa10.75□□□□□ -0.69
HMGN1-208ENST00000443046 DYNLRB2Q8TF09 96 aa10.75□□□□□ -0.69
HMGN1-208ENST00000443046 GATAD1Q8WUU5 269 aa10.75□□□□□ -0.69
HMGN1-208ENST00000443046 PYDC1Q8WXC3 89 aa10.75□□□□□ -0.69
HMGN1-208ENST00000443046 RIMS4Q9H426 269 aaPredicted RBP10.75□□□□□ -0.69
HMGN1-208ENST00000443046 SLC35D1Q9NTN3 355 aa10.75□□□□□ -0.69
HMGN1-208ENST00000443046 ZNF221Q9UK13 617 aa10.75□□□□□ -0.69
HMGN1-208ENST00000443046 TP53TG1Q9Y2A0 90 aa10.75□□□□□ -0.69
HMGN1-208ENST00000443046 LOC102724200A0A096LPH7 203 aaPredicted RBP10.74□□□□□ -0.69
HMGN1-208ENST00000443046 IGKV1-6A0A0C4DH72 117 aa10.74□□□□□ -0.69
HMGN1-208ENST00000443046 DYNC1I1O14576 645 aa10.74□□□□□ -0.69
HMGN1-208ENST00000443046 NDUFB8O95169 186 aa10.74□□□□□ -0.69
HMGN1-208ENST00000443046 APELAP0DMC3 54 aa10.74□□□□□ -0.69
HMGN1-208ENST00000443046 HLA-DRB3P79483 266 aa10.74□□□□□ -0.69
HMGN1-208ENST00000443046 ATP5G2Q06055 141 aa10.74□□□□□ -0.69
HMGN1-208ENST00000443046 UNC119Q13432 240 aa10.74□□□□□ -0.69
HMGN1-208ENST00000443046 EXOSC2Q13868 293 aaKnown RBP10.74□□□□□ -0.69
HMGN1-208ENST00000443046 LYG2Q86SG7 212 aa10.74□□□□□ -0.69
HMGN1-208ENST00000443046 ZFP41Q8N8Y5 198 aa10.74□□□□□ -0.69
HMGN1-208ENST00000443046 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.74□□□□□ -0.69
HMGN1-208ENST00000443046 NICN1Q9BSH3 213 aa10.74□□□□□ -0.69
HMGN1-208ENST00000443046 CHMP1AQ9HD42 196 aaPredicted RBP10.74□□□□□ -0.69
HMGN1-208ENST00000443046 KLK5Q9Y337 293 aaPredicted RBP10.74□□□□□ -0.69
HMGN1-208ENST00000443046 A0A0A6YYD4 124 aa10.73□□□□□ -0.69
HMGN1-208ENST00000443046 M0R1X1 148 aa10.73□□□□□ -0.69
HMGN1-208ENST00000443046 PRH1P02810 166 aa10.73□□□□□ -0.69
HMGN1-208ENST00000443046 CD1AP06126 327 aa10.73□□□□□ -0.69
HMGN1-208ENST00000443046 SCTP09683 121 aa10.73□□□□□ -0.69
HMGN1-208ENST00000443046 CD37P11049 281 aa10.73□□□□□ -0.69
HMGN1-208ENST00000443046 QRFPP83859 136 aa10.73□□□□□ -0.69
HMGN1-208ENST00000443046 C1orf100Q5SVJ3 147 aa10.73□□□□□ -0.69
HMGN1-208ENST00000443046 TMEM61Q8N0U2 210 aa10.73□□□□□ -0.69
HMGN1-208ENST00000443046 SETD6Q8TBK2 473 aa10.73□□□□□ -0.69
HMGN1-208ENST00000443046 HARBI1Q96MB7 349 aa10.73□□□□□ -0.69
HMGN1-208ENST00000443046 HDHD3Q9BSH5 251 aaPredicted RBP10.73□□□□□ -0.69
HMGN1-208ENST00000443046 TMEM59Q9BXS4 323 aa10.73□□□□□ -0.69
HMGN1-208ENST00000443046 Q9N2K0 584 aa10.73□□□□□ -0.69
HMGN1-208ENST00000443046 MGAT4AQ9UM21 535 aa10.73□□□□□ -0.69
HMGN1-208ENST00000443046 EXOSC1Q9Y3B2 195 aaKnown RBP10.73□□□□□ -0.69
HMGN1-208ENST00000443046 PPP5D1E7EU14 171 aa10.72□□□□□ -0.69
HMGN1-208ENST00000443046 TUSC2O75896 110 aa10.72□□□□□ -0.69
HMGN1-208ENST00000443046 CBLN1P23435 193 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms