RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 GALP22466 123 aa6.05□□□□□ -1.44
CD44-211ENST00000442151 OR3A3P47888 321 aa6.05□□□□□ -1.44
CD44-211ENST00000442151 VEGFCP49767 419 aa6.05□□□□□ -1.44
CD44-211ENST00000442151 LUMP51884 338 aaPredicted RBP6.05□□□□□ -1.44
CD44-211ENST00000442151 CX3CL1P78423 397 aa6.05□□□□□ -1.44
CD44-211ENST00000442151 QRFPP83859 136 aa6.05□□□□□ -1.44
CD44-211ENST00000442151 RTL8BQ17RB0 113 aa6.05□□□□□ -1.44
CD44-211ENST00000442151 C2orf76Q3KRA6 126 aa6.05□□□□□ -1.44
CD44-211ENST00000442151 LIPKQ5VXJ0 399 aa6.05□□□□□ -1.44
CD44-211ENST00000442151 OR10K2Q6IF99 312 aa6.05□□□□□ -1.44
CD44-211ENST00000442151 UNQ5815/PRO19632Q6UWF5 114 aa6.05□□□□□ -1.44
CD44-211ENST00000442151 FAM131AQ6UXB0 335 aa6.05□□□□□ -1.44
CD44-211ENST00000442151 OR10J5Q8NHC4 309 aa6.05□□□□□ -1.44
CD44-211ENST00000442151 FAM3DQ96BQ1 224 aa6.05□□□□□ -1.44
CD44-211ENST00000442151 DUX3Q96PT4 197 aa6.05□□□□□ -1.44
CD44-211ENST00000442151 C11orf54Q9H0W9 315 aaPredicted RBP6.05□□□□□ -1.44
CD44-211ENST00000442151 IFI27L2Q9H2X8 130 aa6.05□□□□□ -1.44
CD44-211ENST00000442151 FBXL15Q9H469 300 aa6.05□□□□□ -1.44
CD44-211ENST00000442151 NOTCH3Q9UM47 2321 aa6.05□□□□□ -1.44
CD44-211ENST00000442151 TRAV1-2A0A0B4J238 106 aa6.04□□□□□ -1.44
CD44-211ENST00000442151 C3orf84H3BNL1 204 aa6.04□□□□□ -1.44
CD44-211ENST00000442151 SOCS1O15524 211 aa6.04□□□□□ -1.44
CD44-211ENST00000442151 SAP30O75446 220 aa6.04□□□□□ -1.44
CD44-211ENST00000442151 CALRP27797 417 aaKnown RBP6.04□□□□□ -1.44
CD44-211ENST00000442151 IRF3Q14653 427 aa6.04□□□□□ -1.44
CD44-211ENST00000442151 PSG5Q15238 335 aa6.04□□□□□ -1.44
CD44-211ENST00000442151 ECSCRQ19T08 205 aa6.04□□□□□ -1.44
CD44-211ENST00000442151 DEFB136Q30KP8 78 aa6.04□□□□□ -1.44
CD44-211ENST00000442151 LAIR2Q6ISS4 152 aa6.04□□□□□ -1.44
CD44-211ENST00000442151 ZNF367Q7RTV3 350 aa6.04□□□□□ -1.44
CD44-211ENST00000442151 DCUN1D4Q92564 292 aa6.04□□□□□ -1.44
CD44-211ENST00000442151 TMEM203Q969S6 136 aa6.04□□□□□ -1.44
CD44-211ENST00000442151 RAB3CQ96E17 227 aa6.04□□□□□ -1.44
CD44-211ENST00000442151 MGLLQ99685 303 aa6.04□□□□□ -1.44
CD44-211ENST00000442151 GINS4Q9BRT9 223 aa6.04□□□□□ -1.44
CD44-211ENST00000442151 PECRQ9BY49 303 aa6.04□□□□□ -1.44
CD44-211ENST00000442151 TOLLIPQ9H0E2 274 aa6.04□□□□□ -1.44
CD44-211ENST00000442151 ZNF355PQ9NSJ1 428 aa6.04□□□□□ -1.44
CD44-211ENST00000442151 SLC35D1Q9NTN3 355 aa6.04□□□□□ -1.44
CD44-211ENST00000442151 SCOCQ9UIL1 159 aa6.04□□□□□ -1.44
CD44-211ENST00000442151 LSM2Q9Y333 95 aaKnown RBP6.04□□□□□ -1.44
CD44-211ENST00000442151 AK6Q9Y3D8 172 aaKnown RBP6.04□□□□□ -1.44
CD44-211ENST00000442151 LSM4Q9Y4Z0 139 aaKnown RBP6.04□□□□□ -1.44
CD44-211ENST00000442151 G3V318 75 aa6.04□□□□□ -1.44
CD44-211ENST00000442151 H0Y980 276 aa6.04□□□□□ -1.44
CD44-211ENST00000442151 FABP7O15540 132 aa6.04□□□□□ -1.44
CD44-211ENST00000442151 BRI3O95415 125 aa6.04□□□□□ -1.44
CD44-211ENST00000442151 TRGV3P03979 118 aa6.04□□□□□ -1.44
CD44-211ENST00000442151 UNC119Q13432 240 aa6.04□□□□□ -1.44
CD44-211ENST00000442151 FXYD3Q14802 87 aa6.04□□□□□ -1.44
CD44-211ENST00000442151 VMA21Q3ZAQ7 101 aa6.04□□□□□ -1.44
CD44-211ENST00000442151 FAM53AQ6NSI3 398 aaPredicted RBP6.04□□□□□ -1.44
CD44-211ENST00000442151 SLC25A42Q86VD7 318 aa6.04□□□□□ -1.44
CD44-211ENST00000442151 ANKRD13BQ86YJ7 626 aa6.04□□□□□ -1.44
CD44-211ENST00000442151 ARPC1AQ92747 370 aa6.04□□□□□ -1.44
CD44-211ENST00000442151 ABHD14BQ96IU4 210 aa6.04□□□□□ -1.44
CD44-211ENST00000442151 USMG5Q96IX5 58 aa6.04□□□□□ -1.44
CD44-211ENST00000442151 RHOVQ96L33 236 aa6.04□□□□□ -1.44
CD44-211ENST00000442151 AIFM2Q9BRQ8 373 aa6.04□□□□□ -1.44
CD44-211ENST00000442151 AGMATQ9BSE5 352 aa6.04□□□□□ -1.44
CD44-211ENST00000442151 NICN1Q9BSH3 213 aa6.04□□□□□ -1.44
CD44-211ENST00000442151 KLK15Q9H2R5 256 aa6.04□□□□□ -1.44
CD44-211ENST00000442151 Q9H521 79 aa6.04□□□□□ -1.44
CD44-211ENST00000442151 RDH8Q9NYR8 311 aa6.04□□□□□ -1.44
CD44-211ENST00000442151 STUB1Q9UNE7 303 aa6.04□□□□□ -1.44
CD44-211ENST00000442151 M0R1X1 148 aa6.03□□□□□ -1.44
CD44-211ENST00000442151 SHOXO15266 292 aa6.03□□□□□ -1.44
CD44-211ENST00000442151 ACTL6BO94805 426 aa6.03□□□□□ -1.44
CD44-211ENST00000442151 SCTP09683 121 aa6.03□□□□□ -1.44
CD44-211ENST00000442151 CNTFRP26992 372 aa6.03□□□□□ -1.44
CD44-211ENST00000442151 MAP2K4P45985 399 aa6.03□□□□□ -1.44
CD44-211ENST00000442151 TPPP2P59282 170 aa6.03□□□□□ -1.44
CD44-211ENST00000442151 ARFRP1Q13795 201 aa6.03□□□□□ -1.44
CD44-211ENST00000442151 KIAA0141Q14154 515 aaPredicted RBP6.03□□□□□ -1.44
CD44-211ENST00000442151 RPL39P5Q59GN2 51 aa6.03□□□□□ -1.44
CD44-211ENST00000442151 ACSM6Q6P461 480 aa6.03□□□□□ -1.44
CD44-211ENST00000442151 TMEM91Q6ZNR0 172 aa6.03□□□□□ -1.44
CD44-211ENST00000442151 SGPP2Q8IWX5 399 aa6.03□□□□□ -1.44
CD44-211ENST00000442151 TEX45Q8NA69 505 aa6.03□□□□□ -1.44
CD44-211ENST00000442151 ARHGAP5-AS1Q96IT6 56 aa6.03□□□□□ -1.44
CD44-211ENST00000442151 PRR25Q96S07 402 aa6.03□□□□□ -1.44
CD44-211ENST00000442151 CLCC1Q96S66 551 aa6.03□□□□□ -1.44
CD44-211ENST00000442151 GNB4Q9HAV0 340 aa6.03□□□□□ -1.44
CD44-211ENST00000442151 A3GALT2U3KPV4 340 aa6.03□□□□□ -1.44
CD44-211ENST00000442151 A0A0B4J203 849 aa6.02□□□□□ -1.45
CD44-211ENST00000442151 A6NHS1 94 aa6.02□□□□□ -1.45
CD44-211ENST00000442151 AIREO43918 545 aa6.02□□□□□ -1.45
CD44-211ENST00000442151 CA2P00918 260 aa6.02□□□□□ -1.45
CD44-211ENST00000442151 GP9P14770 177 aa6.02□□□□□ -1.45
CD44-211ENST00000442151 RAB3BP20337 219 aa6.02□□□□□ -1.45
CD44-211ENST00000442151 CRHBPP24387 322 aa6.02□□□□□ -1.45
CD44-211ENST00000442151 TMEM50BP56557 158 aa6.02□□□□□ -1.45
CD44-211ENST00000442151 GNB1P62873 340 aa6.02□□□□□ -1.45
CD44-211ENST00000442151 POC5Q8NA72 575 aa6.02□□□□□ -1.45
CD44-211ENST00000442151 LFNGQ8NES3 379 aa6.02□□□□□ -1.45
CD44-211ENST00000442151 OR10R2Q8NGX6 335 aa6.02□□□□□ -1.45
CD44-211ENST00000442151 RITA1Q96K30 269 aa6.02□□□□□ -1.45
CD44-211ENST00000442151 OR5B12Q96R08 314 aa6.02□□□□□ -1.45
CD44-211ENST00000442151 PHB2Q99623 299 aa6.02□□□□□ -1.45
CD44-211ENST00000442151 YTHDF1Q9BYJ9 559 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms