RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 SAA2-SAA4A0A096LPE2 208 aa8.41□□□□□ -1.06
MDC1-205ENST00000425072 DUXBA0A1W2PPF3 345 aa8.41□□□□□ -1.06
MDC1-205ENST00000425072 TNFSF12O43508 249 aa8.41□□□□□ -1.06
MDC1-205ENST00000425072 PFDN1O60925 122 aa8.41□□□□□ -1.06
MDC1-205ENST00000425072 OR5AC1P0C628 307 aa8.41□□□□□ -1.06
MDC1-205ENST00000425072 SAA2P0DJI9 122 aaPredicted RBP8.41□□□□□ -1.06
MDC1-205ENST00000425072 MMP9P14780 707 aa8.41□□□□□ -1.06
MDC1-205ENST00000425072 COX7A1P24310 79 aa8.41□□□□□ -1.06
MDC1-205ENST00000425072 UCP1P25874 307 aa8.41□□□□□ -1.06
MDC1-205ENST00000425072 DUTP33316 252 aaKnown RBP8.41□□□□□ -1.06
MDC1-205ENST00000425072 ARHGDIBP52566 201 aa8.41□□□□□ -1.06
MDC1-205ENST00000425072 EIF4EBP1Q13541 118 aaPredicted RBP8.41□□□□□ -1.06
MDC1-205ENST00000425072 TMEM187Q14656 261 aa8.41□□□□□ -1.06
MDC1-205ENST00000425072 SLC9A3R2Q15599 337 aa8.41□□□□□ -1.06
MDC1-205ENST00000425072 TMEM249Q2WGJ8 235 aa8.41□□□□□ -1.06
MDC1-205ENST00000425072 SP6Q3SY56 376 aa8.41□□□□□ -1.06
MDC1-205ENST00000425072 MIDNQ504T8 468 aa8.41□□□□□ -1.06
MDC1-205ENST00000425072 CCDC144NLQ6NUI1 221 aa8.41□□□□□ -1.06
MDC1-205ENST00000425072 LIAT1Q6ZQX7 453 aa8.41□□□□□ -1.06
MDC1-205ENST00000425072 ZNF833PQ6ZTB9 187 aa8.41□□□□□ -1.06
MDC1-205ENST00000425072 TGIF2LXQ8IUE1 241 aa8.41□□□□□ -1.06
MDC1-205ENST00000425072 ODF3L1Q8IXM7 274 aa8.41□□□□□ -1.06
MDC1-205ENST00000425072 OR52B4Q8NGK2 314 aa8.41□□□□□ -1.06
MDC1-205ENST00000425072 OR51H1Q8NH63 302 aa8.41□□□□□ -1.06
MDC1-205ENST00000425072 TCTEX1D2Q8WW35 142 aa8.41□□□□□ -1.06
MDC1-205ENST00000425072 ASB13Q8WXK3 278 aa8.41□□□□□ -1.06
MDC1-205ENST00000425072 IL22RA2Q969J5 263 aa8.41□□□□□ -1.06
MDC1-205ENST00000425072 ST6GALNAC6Q969X2 333 aa8.41□□□□□ -1.06
MDC1-205ENST00000425072 MSI2Q96DH6 328 aaKnown RBP8.41□□□□□ -1.06
MDC1-205ENST00000425072 MALSU1Q96EH3 234 aa8.41□□□□□ -1.06
MDC1-205ENST00000425072 TMEM56Q96MV1 263 aa8.41□□□□□ -1.06
MDC1-205ENST00000425072 ZNF251Q9BRH9 671 aa8.41□□□□□ -1.06
MDC1-205ENST00000425072 RAB18Q9NP72 206 aa8.41□□□□□ -1.06
MDC1-205ENST00000425072 SIRT7Q9NRC8 400 aa8.41□□□□□ -1.06
MDC1-205ENST00000425072 TMED3Q9Y3Q3 217 aa8.41□□□□□ -1.06
MDC1-205ENST00000425072 TBL2Q9Y4P3 447 aaKnown RBP8.41□□□□□ -1.06
MDC1-205ENST00000425072 TMEM56-RWDD3S4R434 201 aa8.41□□□□□ -1.06
MDC1-205ENST00000425072 A0A0B4J293 547 aa8.4□□□□□ -1.06
MDC1-205ENST00000425072 RBFOX2O43251 390 aaKnown RBP eCLIP8.4□□□□□ -1.06
MDC1-205ENST00000425072 PROP1O75360 226 aa8.4□□□□□ -1.06
MDC1-205ENST00000425072 HPRT1P00492 218 aa8.4□□□□□ -1.06
MDC1-205ENST00000425072 LPAR6P43657 344 aa8.4□□□□□ -1.06
MDC1-205ENST00000425072 CYCSP99999 105 aaKnown RBP8.4□□□□□ -1.06
MDC1-205ENST00000425072 RTL8BQ17RB0 113 aa8.4□□□□□ -1.06
MDC1-205ENST00000425072 RPL39P5Q59GN2 51 aa8.4□□□□□ -1.06
MDC1-205ENST00000425072 DHRS7BQ6IAN0 325 aaPredicted RBP8.4□□□□□ -1.06
MDC1-205ENST00000425072 KRTAP1-3Q8IUG1 177 aa8.4□□□□□ -1.06
MDC1-205ENST00000425072 SPAG16Q8N0X2 631 aa8.4□□□□□ -1.06
MDC1-205ENST00000425072 LHX4Q969G2 390 aa8.4□□□□□ -1.06
MDC1-205ENST00000425072 RPEQ96AT9 228 aa8.4□□□□□ -1.06
MDC1-205ENST00000425072 TBX15Q96SF7 602 aa8.4□□□□□ -1.06
MDC1-205ENST00000425072 PLEKHA2Q9HB19 425 aa8.4□□□□□ -1.06
MDC1-205ENST00000425072 PDZD2O15018 2839 aa8.39□□□□□ -1.07
MDC1-205ENST00000425072 DBX1A6NMT0 343 aa8.39□□□□□ -1.07
MDC1-205ENST00000425072 RNASEK-C17orf49H0YIS7 233 aa8.39□□□□□ -1.07
MDC1-205ENST00000425072 LY6LH3BQJ8 138 aa8.39□□□□□ -1.07
MDC1-205ENST00000425072 CCNKO75909 580 aa8.39□□□□□ -1.07
MDC1-205ENST00000425072 HRASP01112 189 aa8.39□□□□□ -1.07
MDC1-205ENST00000425072 APOA2P02652 100 aa8.39□□□□□ -1.07
MDC1-205ENST00000425072 SULT1A3P0DMM9 295 aa8.39□□□□□ -1.07
MDC1-205ENST00000425072 SULT1A4P0DMN0 295 aa8.39□□□□□ -1.07
MDC1-205ENST00000425072 CT45A6P0DMU7 189 aa8.39□□□□□ -1.07
MDC1-205ENST00000425072 CT45A5P0DMU8 189 aa8.39□□□□□ -1.07
MDC1-205ENST00000425072 CT45A7P0DMV0 189 aa8.39□□□□□ -1.07
MDC1-205ENST00000425072 IGHV4-31P0DP07 118 aa8.39□□□□□ -1.07
MDC1-205ENST00000425072 VDAC1P21796 283 aa8.39□□□□□ -1.07
MDC1-205ENST00000425072 RPL30P62888 115 aaKnown RBP8.39□□□□□ -1.07
MDC1-205ENST00000425072 ZNF816Q0VGE8 651 aaPredicted RBP8.39□□□□□ -1.07
MDC1-205ENST00000425072 UTF1Q5T230 341 aa8.39□□□□□ -1.07
MDC1-205ENST00000425072 GPR157Q5UAW9 335 aa8.39□□□□□ -1.07
MDC1-205ENST00000425072 GSG1LQ6UXU4 331 aa8.39□□□□□ -1.07
MDC1-205ENST00000425072 SELENOHQ8IZQ5 122 aaKnown RBP8.39□□□□□ -1.07
MDC1-205ENST00000425072 OR8H3Q8N146 312 aa8.39□□□□□ -1.07
MDC1-205ENST00000425072 WFDC11Q8NEX6 87 aa8.39□□□□□ -1.07
MDC1-205ENST00000425072 OR4P4Q8NGL7 312 aa8.39□□□□□ -1.07
MDC1-205ENST00000425072 RBPMSQ93062 196 aaKnown RBP8.39□□□□□ -1.07
MDC1-205ENST00000425072 RRNAD1Q96FB5 475 aaKnown RBP8.39□□□□□ -1.07
MDC1-205ENST00000425072 TP53RKQ96S44 253 aa8.39□□□□□ -1.07
MDC1-205ENST00000425072 RNF5Q99942 180 aa8.39□□□□□ -1.07
MDC1-205ENST00000425072 CACFD1Q9UGQ2 172 aa8.39□□□□□ -1.07
MDC1-205ENST00000425072 ITGB1BP2Q9UKP3 347 aa8.39□□□□□ -1.07
MDC1-205ENST00000425072 IGHV1-69DA0A0B4J2H0 117 aa8.38□□□□□ -1.07
MDC1-205ENST00000425072 CENPVL3A0A0U1RRI6 287 aa8.38□□□□□ -1.07
MDC1-205ENST00000425072 C5orf51A6NDU8 294 aa8.38□□□□□ -1.07
MDC1-205ENST00000425072 LINC00473A8K010 186 aa8.38□□□□□ -1.07
MDC1-205ENST00000425072 ODF3BA8MYP8 253 aa8.38□□□□□ -1.07
MDC1-205ENST00000425072 H7C2Y5 167 aa8.38□□□□□ -1.07
MDC1-205ENST00000425072 FCGR3BO75015 233 aa8.38□□□□□ -1.07
MDC1-205ENST00000425072 IGHV1-69P01742 117 aa8.38□□□□□ -1.07
MDC1-205ENST00000425072 HOXB5P09067 269 aa8.38□□□□□ -1.07
MDC1-205ENST00000425072 HOXB4P17483 251 aaPredicted RBP8.38□□□□□ -1.07
MDC1-205ENST00000425072 BRS3P32247 399 aa8.38□□□□□ -1.07
MDC1-205ENST00000425072 RAB13P51153 203 aa8.38□□□□□ -1.07
MDC1-205ENST00000425072 FCN2Q15485 313 aa8.38□□□□□ -1.07
MDC1-205ENST00000425072 ANKRD55Q3KP44 614 aa8.38□□□□□ -1.07
MDC1-205ENST00000425072 TPTE2P1Q5T6R2 138 aa8.38□□□□□ -1.07
MDC1-205ENST00000425072 TMEM268Q5VZI3 342 aa8.38□□□□□ -1.07
MDC1-205ENST00000425072 HCP5Q6MZN7 132 aa8.38□□□□□ -1.07
MDC1-205ENST00000425072 MOB3BQ86TA1 216 aa8.38□□□□□ -1.07
MDC1-205ENST00000425072 FAM219AQ8IW50 185 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms