RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 GATAD1Q8WUU5 269 aa12.54□□□□□ -0.4
CHCHD3-202ENST00000423635 KCTD12Q96CX2 325 aaKnown RBP12.54□□□□□ -0.4
CHCHD3-202ENST00000423635 GGTLC1Q9BX51 225 aa12.54□□□□□ -0.4
CHCHD3-202ENST00000423635 COA4Q9NYJ1 87 aa12.54□□□□□ -0.4
CHCHD3-202ENST00000423635 A0A0J9YWU9 116 aa12.53□□□□□ -0.4
CHCHD3-202ENST00000423635 NDUFB8O95169 186 aa12.53□□□□□ -0.4
CHCHD3-202ENST00000423635 LALBAP00709 142 aa12.53□□□□□ -0.4
CHCHD3-202ENST00000423635 FOLR2P14207 255 aa12.53□□□□□ -0.4
CHCHD3-202ENST00000423635 ZBTB25P24278 435 aa12.53□□□□□ -0.4
CHCHD3-202ENST00000423635 SLC16A13Q7RTY0 426 aa12.53□□□□□ -0.4
CHCHD3-202ENST00000423635 UQCC2Q9BRT2 126 aa12.53□□□□□ -0.4
CHCHD3-202ENST00000423635 ZNF230Q9UIE0 474 aaPredicted RBP12.53□□□□□ -0.4
CHCHD3-202ENST00000423635 LOC102724200A0A096LPH7 203 aaPredicted RBP12.52□□□□□ -0.41
CHCHD3-202ENST00000423635 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.52□□□□□ -0.41
CHCHD3-202ENST00000423635 TRBV6-6A0A0A6YYG2 114 aa12.52□□□□□ -0.41
CHCHD3-202ENST00000423635 A0A1W2PPK0 400 aa12.52□□□□□ -0.41
CHCHD3-202ENST00000423635 C2orf70A6NJV1 201 aa12.52□□□□□ -0.41
CHCHD3-202ENST00000423635 DEDDO75618 318 aa12.52□□□□□ -0.41
CHCHD3-202ENST00000423635 APOA2P02652 100 aa12.52□□□□□ -0.41
CHCHD3-202ENST00000423635 DCKP27707 260 aa12.52□□□□□ -0.41
CHCHD3-202ENST00000423635 MRGPRG-AS1Q2M3A8 158 aa12.52□□□□□ -0.41
CHCHD3-202ENST00000423635 C1orf146Q5VVC0 180 aa12.52□□□□□ -0.41
CHCHD3-202ENST00000423635 MOB1BQ7L9L4 216 aa12.52□□□□□ -0.41
CHCHD3-202ENST00000423635 C6orf201Q7Z4U5 140 aa12.52□□□□□ -0.41
CHCHD3-202ENST00000423635 APH1BQ8WW43 257 aa12.52□□□□□ -0.41
CHCHD3-202ENST00000423635 WDR89Q96FK6 387 aaPredicted RBP12.52□□□□□ -0.41
CHCHD3-202ENST00000423635 PGLYRP3Q96LB9 341 aa12.52□□□□□ -0.41
CHCHD3-202ENST00000423635 AKIP1Q9NQ31 210 aa12.52□□□□□ -0.41
CHCHD3-202ENST00000423635 OR1A1Q9P1Q5 309 aa12.52□□□□□ -0.41
CHCHD3-202ENST00000423635 TP53TG1Q9Y2A0 90 aa12.52□□□□□ -0.41
CHCHD3-202ENST00000423635 DMRT1Q9Y5R6 373 aa12.52□□□□□ -0.41
CHCHD3-202ENST00000423635 TRBV9A0A0B4J1U6 114 aa12.51□□□□□ -0.41
CHCHD3-202ENST00000423635 MSGN1A6NI15 193 aa12.51□□□□□ -0.41
CHCHD3-202ENST00000423635 FAM223BA6NKX1 122 aa12.51□□□□□ -0.41
CHCHD3-202ENST00000423635 OR9G9P0C7N8 305 aa12.51□□□□□ -0.41
CHCHD3-202ENST00000423635 LYG2Q86SG7 212 aa12.51□□□□□ -0.41
CHCHD3-202ENST00000423635 FAM223AQ8IWN6 122 aa12.51□□□□□ -0.41
CHCHD3-202ENST00000423635 RIMS4Q9H426 269 aaPredicted RBP12.51□□□□□ -0.41
CHCHD3-202ENST00000423635 SLC35D1Q9NTN3 355 aa12.51□□□□□ -0.41
CHCHD3-202ENST00000423635 ZNF221Q9UK13 617 aa12.51□□□□□ -0.41
CHCHD3-202ENST00000423635 LGALS9O00182 355 aa12.5□□□□□ -0.41
CHCHD3-202ENST00000423635 EDN2P20800 178 aa12.5□□□□□ -0.41
CHCHD3-202ENST00000423635 RHOGP84095 191 aa12.5□□□□□ -0.41
CHCHD3-202ENST00000423635 ATP5G2Q06055 141 aa12.5□□□□□ -0.41
CHCHD3-202ENST00000423635 NKAIN3Q8N8D7 197 aa12.5□□□□□ -0.41
CHCHD3-202ENST00000423635 KCNG3Q8TAE7 436 aa12.5□□□□□ -0.41
CHCHD3-202ENST00000423635 SLC29A1Q99808 456 aa12.5□□□□□ -0.41
CHCHD3-202ENST00000423635 CHMP1AQ9HD42 196 aaPredicted RBP12.5□□□□□ -0.41
CHCHD3-202ENST00000423635 SRRM4A7MD48 611 aaKnown RBP12.49□□□□□ -0.41
CHCHD3-202ENST00000423635 UBBP0CG47 229 aa12.49□□□□□ -0.41
CHCHD3-202ENST00000423635 APELAP0DMC3 54 aa12.49□□□□□ -0.41
CHCHD3-202ENST00000423635 HTR2CP28335 458 aa12.49□□□□□ -0.41
CHCHD3-202ENST00000423635 BMI1P35226 326 aa12.49□□□□□ -0.41
CHCHD3-202ENST00000423635 RPS27AP62979 156 aaKnown RBP12.49□□□□□ -0.41
CHCHD3-202ENST00000423635 EXOSC2Q13868 293 aaKnown RBP12.49□□□□□ -0.41
CHCHD3-202ENST00000423635 FAM209BQ5JX69 171 aa12.49□□□□□ -0.41
CHCHD3-202ENST00000423635 Q6ZWC4 215 aa12.49□□□□□ -0.41
CHCHD3-202ENST00000423635 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.49□□□□□ -0.41
CHCHD3-202ENST00000423635 SETD6Q8TBK2 473 aa12.49□□□□□ -0.41
CHCHD3-202ENST00000423635 DERL3Q96Q80 235 aa12.49□□□□□ -0.41
CHCHD3-202ENST00000423635 PHB2Q99623 299 aa12.49□□□□□ -0.41
CHCHD3-202ENST00000423635 TM2D1Q9BX74 207 aa12.49□□□□□ -0.41
CHCHD3-202ENST00000423635 LOC100130705A0A1B0GUX0 176 aa12.48□□□□□ -0.41
CHCHD3-202ENST00000423635 TUSC2O75896 110 aa12.48□□□□□ -0.41
CHCHD3-202ENST00000423635 CBLN1P23435 193 aa12.48□□□□□ -0.41
CHCHD3-202ENST00000423635 ZNF45Q02386 682 aa12.48□□□□□ -0.41
CHCHD3-202ENST00000423635 TMEM177Q53S58 311 aa12.48□□□□□ -0.41
CHCHD3-202ENST00000423635 CBR4Q8N4T8 237 aa12.48□□□□□ -0.41
CHCHD3-202ENST00000423635 ZNF485Q8NCK3 441 aa12.48□□□□□ -0.41
CHCHD3-202ENST00000423635 THRSPQ92748 146 aa12.48□□□□□ -0.41
CHCHD3-202ENST00000423635 HARBI1Q96MB7 349 aa12.48□□□□□ -0.41
CHCHD3-202ENST00000423635 MGAT4AQ9UM21 535 aa12.48□□□□□ -0.41
CHCHD3-202ENST00000423635 DNAH6Q9C0G6 4158 aa12.48□□□□□ -0.41
CHCHD3-202ENST00000423635 M0R1X1 148 aa12.47□□□□□ -0.41
CHCHD3-202ENST00000423635 DYNC1I1O14576 645 aa12.47□□□□□ -0.41
CHCHD3-202ENST00000423635 SPRY2O43597 315 aa12.47□□□□□ -0.41
CHCHD3-202ENST00000423635 WBP4O75554 376 aaKnown RBP12.47□□□□□ -0.41
CHCHD3-202ENST00000423635 SCTP09683 121 aa12.47□□□□□ -0.41
CHCHD3-202ENST00000423635 HLA-DRB3P79483 266 aa12.47□□□□□ -0.41
CHCHD3-202ENST00000423635 TAGLNQ01995 201 aaKnown RBP12.47□□□□□ -0.41
CHCHD3-202ENST00000423635 SMN1Q16637 294 aaKnown RBP12.47□□□□□ -0.41
CHCHD3-202ENST00000423635 ANKRD55Q3KP44 614 aa12.47□□□□□ -0.41
CHCHD3-202ENST00000423635 OR10K2Q6IF99 312 aa12.47□□□□□ -0.41
CHCHD3-202ENST00000423635 GPHB5Q86YW7 130 aa12.47□□□□□ -0.41
CHCHD3-202ENST00000423635 TMEM61Q8N0U2 210 aa12.47□□□□□ -0.41
CHCHD3-202ENST00000423635 TEX45Q8NA69 505 aa12.47□□□□□ -0.41
CHCHD3-202ENST00000423635 OR52B4Q8NGK2 314 aa12.47□□□□□ -0.41
CHCHD3-202ENST00000423635 PLEKHJ1Q9NW61 149 aa12.47□□□□□ -0.41
CHCHD3-202ENST00000423635 CLEC2DQ9UHP7 191 aa12.47□□□□□ -0.41
CHCHD3-202ENST00000423635 DIMT1Q9UNQ2 313 aaKnown RBP12.47□□□□□ -0.41
CHCHD3-202ENST00000423635 GGCTO75223 188 aaKnown RBP12.46□□□□□ -0.41
CHCHD3-202ENST00000423635 PRH1P02810 166 aa12.46□□□□□ -0.41
CHCHD3-202ENST00000423635 ZNF57Q68EA5 555 aaPredicted RBP12.46□□□□□ -0.41
CHCHD3-202ENST00000423635 TTC9CQ8N5M4 171 aa12.46□□□□□ -0.41
CHCHD3-202ENST00000423635 ZFP41Q8N8Y5 198 aa12.46□□□□□ -0.41
CHCHD3-202ENST00000423635 NECAP1Q8NC96 275 aa12.46□□□□□ -0.41
CHCHD3-202ENST00000423635 SRSF12Q8WXF0 261 aaKnown RBP12.46□□□□□ -0.41
CHCHD3-202ENST00000423635 NICN1Q9BSH3 213 aa12.46□□□□□ -0.41
CHCHD3-202ENST00000423635 TMEM59Q9BXS4 323 aa12.46□□□□□ -0.41
CHCHD3-202ENST00000423635 Q9N2K0 584 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms