RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 SPDEFO95238 335 aa8.62□□□□□ -1.03
USP49-204ENST00000423567 IGF1P05019 195 aa8.62□□□□□ -1.03
USP49-204ENST00000423567 SMIM18P0DKX4 95 aa8.62□□□□□ -1.03
USP49-204ENST00000423567 RRASP10301 218 aa8.62□□□□□ -1.03
USP49-204ENST00000423567 THBS3P49746 956 aa8.62□□□□□ -1.03
USP49-204ENST00000423567 RORCP51449 518 aa8.62□□□□□ -1.03
USP49-204ENST00000423567 RPL23AP62750 156 aaKnown RBP8.62□□□□□ -1.03
USP49-204ENST00000423567 TNP2Q05952 138 aa8.62□□□□□ -1.03
USP49-204ENST00000423567 RTL8BQ17RB0 113 aa8.62□□□□□ -1.03
USP49-204ENST00000423567 TMEM69Q5SWH9 247 aa8.62□□□□□ -1.03
USP49-204ENST00000423567 ANKRD13BQ86YJ7 626 aa8.62□□□□□ -1.03
USP49-204ENST00000423567 ZNF383Q8NA42 475 aa8.62□□□□□ -1.03
USP49-204ENST00000423567 BEST4Q8NFU0 473 aa8.62□□□□□ -1.03
USP49-204ENST00000423567 ABHD5Q8WTS1 349 aa8.62□□□□□ -1.03
USP49-204ENST00000423567 ACOT12Q8WYK0 555 aa8.62□□□□□ -1.03
USP49-204ENST00000423567 ADTRPQ96IZ2 230 aa8.62□□□□□ -1.03
USP49-204ENST00000423567 OR51J1Q9H342 316 aa8.62□□□□□ -1.03
USP49-204ENST00000423567 FBXL15Q9H469 300 aa8.62□□□□□ -1.03
USP49-204ENST00000423567 IFT46Q9NQC8 304 aa8.62□□□□□ -1.03
USP49-204ENST00000423567 PARP11Q9NR21 331 aa8.62□□□□□ -1.03
USP49-204ENST00000423567 SLC35D1Q9NTN3 355 aa8.62□□□□□ -1.03
USP49-204ENST00000423567 COMMD3Q9UBI1 195 aa8.62□□□□□ -1.03
USP49-204ENST00000423567 METTL1Q9UBP6 276 aaKnown RBP8.62□□□□□ -1.03
USP49-204ENST00000423567 ZNF580Q9UK33 172 aa8.62□□□□□ -1.03
USP49-204ENST00000423567 OR2W1Q9Y3N9 320 aa8.62□□□□□ -1.03
USP49-204ENST00000423567 J3QRK9 145 aa8.61□□□□□ -1.03
USP49-204ENST00000423567 PROP1O75360 226 aa8.61□□□□□ -1.03
USP49-204ENST00000423567 GABARAPO95166 117 aa8.61□□□□□ -1.03
USP49-204ENST00000423567 ELANEP08246 267 aa8.61□□□□□ -1.03
USP49-204ENST00000423567 CD33P20138 364 aa8.61□□□□□ -1.03
USP49-204ENST00000423567 NFYAP23511 347 aaPredicted RBP8.61□□□□□ -1.03
USP49-204ENST00000423567 SLC6A1P30531 599 aa8.61□□□□□ -1.03
USP49-204ENST00000423567 LGALS7P47929 136 aa8.61□□□□□ -1.03
USP49-204ENST00000423567 FOXE3Q13461 319 aa8.61□□□□□ -1.03
USP49-204ENST00000423567 GPR107Q5VW38 600 aa8.61□□□□□ -1.03
USP49-204ENST00000423567 MZT2AQ6P582 158 aa8.61□□□□□ -1.03
USP49-204ENST00000423567 HOGA1Q86XE5 327 aa8.61□□□□□ -1.03
USP49-204ENST00000423567 ZNF645Q8N7E2 425 aa8.61□□□□□ -1.03
USP49-204ENST00000423567 AP3S1Q92572 193 aa8.61□□□□□ -1.03
USP49-204ENST00000423567 CMTM3Q96MX0 182 aa8.61□□□□□ -1.03
USP49-204ENST00000423567 NECAP2Q9NVZ3 263 aa8.61□□□□□ -1.03
USP49-204ENST00000423567 IGHV7-81A0A0B4J1V7 117 aa8.6□□□□□ -1.03
USP49-204ENST00000423567 SHOXO15266 292 aa8.6□□□□□ -1.03
USP49-204ENST00000423567 ATP6V0E1O15342 81 aa8.6□□□□□ -1.03
USP49-204ENST00000423567 HLA-DQB1P01920 261 aa8.6□□□□□ -1.03
USP49-204ENST00000423567 APOA1P02647 267 aa8.6□□□□□ -1.03
USP49-204ENST00000423567 IGKV1-16P04430 117 aa8.6□□□□□ -1.03
USP49-204ENST00000423567 LINC00205P59089 165 aa8.6□□□□□ -1.03
USP49-204ENST00000423567 TAS2R20P59543 309 aa8.6□□□□□ -1.03
USP49-204ENST00000423567 DEFA6Q01524 100 aa8.6□□□□□ -1.03
USP49-204ENST00000423567 TMEM267Q0VDI3 215 aaPredicted RBP8.6□□□□□ -1.03
USP49-204ENST00000423567 PSG5Q15238 335 aa8.6□□□□□ -1.03
USP49-204ENST00000423567 SAMD5Q5TGI4 173 aa8.6□□□□□ -1.03
USP49-204ENST00000423567 ZNF660Q6AZW8 331 aaPredicted RBP8.6□□□□□ -1.03
USP49-204ENST00000423567 TMEM65Q6PI78 240 aa8.6□□□□□ -1.03
USP49-204ENST00000423567 GVQW1Q8N7I0 195 aa8.6□□□□□ -1.03
USP49-204ENST00000423567 KLHL30-AS1Q8NEE0 82 aa8.6□□□□□ -1.03
USP49-204ENST00000423567 HARBI1Q96MB7 349 aa8.6□□□□□ -1.03
USP49-204ENST00000423567 CLCC1Q96S66 551 aa8.6□□□□□ -1.03
USP49-204ENST00000423567 PRELID3BQ9Y3B1 194 aa8.6□□□□□ -1.03
USP49-204ENST00000423567 WSB1Q9Y6I7 421 aa8.6□□□□□ -1.03
USP49-204ENST00000423567 WNK1Q9H4A3 2382 aa8.59□□□□□ -1.03
USP49-204ENST00000423567 TRRAPQ9Y4A5 3859 aa8.59□□□□□ -1.03
USP49-204ENST00000423567 TRAV41A0A0B4J266 112 aa8.59□□□□□ -1.03
USP49-204ENST00000423567 TUSC2O75896 110 aa8.59□□□□□ -1.03
USP49-204ENST00000423567 IGHG4P01861 327 aa8.59□□□□□ -1.03
USP49-204ENST00000423567 PTHLHP12272 177 aa8.59□□□□□ -1.03
USP49-204ENST00000423567 FCGR2CP31995 323 aa8.59□□□□□ -1.03
USP49-204ENST00000423567 DUTP33316 252 aaKnown RBP8.59□□□□□ -1.03
USP49-204ENST00000423567 PRSS3P35030 304 aa8.59□□□□□ -1.03
USP49-204ENST00000423567 CX3CL1P78423 397 aa8.59□□□□□ -1.03
USP49-204ENST00000423567 CTF1Q16619 201 aa8.59□□□□□ -1.03
USP49-204ENST00000423567 ECSCRQ19T08 205 aa8.59□□□□□ -1.03
USP49-204ENST00000423567 VMA21Q3ZAQ7 101 aa8.59□□□□□ -1.03
USP49-204ENST00000423567 ZNF695Q8IW36 515 aa8.59□□□□□ -1.03
USP49-204ENST00000423567 TCTEX1D1Q8N7M0 179 aa8.59□□□□□ -1.03
USP49-204ENST00000423567 BVESQ8NE79 360 aa8.59□□□□□ -1.03
USP49-204ENST00000423567 NAA50Q9GZZ1 169 aaKnown RBP8.59□□□□□ -1.03
USP49-204ENST00000423567 MRPS7Q9Y2R9 242 aaKnown RBP8.59□□□□□ -1.03
USP49-204ENST00000423567 RBMX2Q9Y388 322 aaKnown RBP8.59□□□□□ -1.03
USP49-204ENST00000423567 PKD1L1Q8TDX9 2849 aa8.58□□□□□ -1.04
USP49-204ENST00000423567 MEIS3P1A6NDR6 274 aa8.58□□□□□ -1.04
USP49-204ENST00000423567 FAM25AB3EWG3 89 aa8.58□□□□□ -1.04
USP49-204ENST00000423567 FAM25CB3EWG5 89 aa8.58□□□□□ -1.04
USP49-204ENST00000423567 FAM25GB3EWG6 89 aa8.58□□□□□ -1.04
USP49-204ENST00000423567 G3V318 75 aa8.58□□□□□ -1.04
USP49-204ENST00000423567 SLC25A17O43808 307 aa8.58□□□□□ -1.04
USP49-204ENST00000423567 NOL3O60936 208 aaKnown RBP8.58□□□□□ -1.04
USP49-204ENST00000423567 CNIH1O95406 144 aa8.58□□□□□ -1.04
USP49-204ENST00000423567 CRYZL1O95825 349 aa8.58□□□□□ -1.04
USP49-204ENST00000423567 CA2P00918 260 aa8.58□□□□□ -1.04
USP49-204ENST00000423567 RPLP1P05386 114 aaKnown RBP8.58□□□□□ -1.04
USP49-204ENST00000423567 EIF4EP06730 217 aaKnown RBP8.58□□□□□ -1.04
USP49-204ENST00000423567 FCER2P06734 321 aa8.58□□□□□ -1.04
USP49-204ENST00000423567 ZNF182P17025 639 aaPredicted RBP8.58□□□□□ -1.04
USP49-204ENST00000423567 CD40LGP29965 261 aa8.58□□□□□ -1.04
USP49-204ENST00000423567 MYCNOSP40205 109 aa8.58□□□□□ -1.04
USP49-204ENST00000423567 ALDH3B2P48448 385 aa8.58□□□□□ -1.04
USP49-204ENST00000423567 TAS2R46P59540 309 aa8.58□□□□□ -1.04
USP49-204ENST00000423567 CFHR3Q02985 330 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms