RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 RPP25LQ8N5L8 163 aaKnown RBP10.67□□□□□ -0.7
PPP4R1-202ENST00000400555 PCGF1Q9BSM1 259 aa10.67□□□□□ -0.7
PPP4R1-202ENST00000400555 VAX2Q9UIW0 290 aa10.67□□□□□ -0.7
PPP4R1-202ENST00000400555 COL5A1P20908 1838 aaPredicted RBP10.67□□□□□ -0.7
PPP4R1-202ENST00000400555 WNK2Q9Y3S1 2297 aa10.67□□□□□ -0.7
PPP4R1-202ENST00000400555 PPP5D1E7EU14 171 aa10.66□□□□□ -0.7
PPP4R1-202ENST00000400555 SMPD2O60906 423 aa10.66□□□□□ -0.7
PPP4R1-202ENST00000400555 FOLR2P14207 255 aa10.66□□□□□ -0.7
PPP4R1-202ENST00000400555 IGHV1-2P23083 117 aa10.66□□□□□ -0.7
PPP4R1-202ENST00000400555 SAXO1Q8IYX7 474 aa10.66□□□□□ -0.7
PPP4R1-202ENST00000400555 TMEM178AQ8NBL3 297 aa10.66□□□□□ -0.7
PPP4R1-202ENST00000400555 WDR61Q9GZS3 305 aaKnown RBP10.66□□□□□ -0.7
PPP4R1-202ENST00000400555 CEP295Q9C0D2 2601 aa10.66□□□□□ -0.7
PPP4R1-202ENST00000400555 SPINK4O60575 86 aa10.66□□□□□ -0.7
PPP4R1-202ENST00000400555 ACTL6BO94805 426 aa10.66□□□□□ -0.7
PPP4R1-202ENST00000400555 BSXQ3C1V8 233 aa10.66□□□□□ -0.7
PPP4R1-202ENST00000400555 Q6P435 159 aa10.66□□□□□ -0.7
PPP4R1-202ENST00000400555 OR4A16Q8NH70 328 aa10.66□□□□□ -0.7
PPP4R1-202ENST00000400555 ZPBPQ9BS86 351 aa10.66□□□□□ -0.7
PPP4R1-202ENST00000400555 TUBA4BQ9H853 241 aa10.66□□□□□ -0.7
PPP4R1-202ENST00000400555 ACSM6Q6P461 480 aa10.66□□□□□ -0.7
PPP4R1-202ENST00000400555 OR13A1Q8NGR1 328 aa10.66□□□□□ -0.7
PPP4R1-202ENST00000400555 RAB24Q969Q5 203 aa10.66□□□□□ -0.7
PPP4R1-202ENST00000400555 GFOD1Q9NXC2 390 aa10.66□□□□□ -0.7
PPP4R1-202ENST00000400555 SPAARA0A1B0GVQ0 90 aa10.65□□□□□ -0.7
PPP4R1-202ENST00000400555 GALR1P47211 349 aa10.65□□□□□ -0.7
PPP4R1-202ENST00000400555 TMEM41BQ5BJD5 291 aa10.65□□□□□ -0.7
PPP4R1-202ENST00000400555 OR51M1Q9H341 326 aa10.65□□□□□ -0.7
PPP4R1-202ENST00000400555 TNRC18O15417 2968 aaPredicted RBP10.65□□□□□ -0.7
PPP4R1-202ENST00000400555 SPINT2O43291 252 aa10.65□□□□□ -0.7
PPP4R1-202ENST00000400555 GALR2O43603 387 aaPredicted RBP10.65□□□□□ -0.7
PPP4R1-202ENST00000400555 IGKV1D-33P01593 117 aa10.65□□□□□ -0.7
PPP4R1-202ENST00000400555 IGKV1-33P01594 117 aa10.65□□□□□ -0.7
PPP4R1-202ENST00000400555 COL8A2P25067 703 aa10.65□□□□□ -0.7
PPP4R1-202ENST00000400555 GAMTQ14353 236 aa10.65□□□□□ -0.7
PPP4R1-202ENST00000400555 ZNRF1Q8ND25 227 aa10.65□□□□□ -0.7
PPP4R1-202ENST00000400555 GUCD1Q96NT3 240 aa10.65□□□□□ -0.7
PPP4R1-202ENST00000400555 GPR87Q9BY21 358 aa10.65□□□□□ -0.7
PPP4R1-202ENST00000400555 OPN3Q9H1Y3 402 aaPredicted RBP10.65□□□□□ -0.7
PPP4R1-202ENST00000400555 FUT9Q9Y231 359 aa10.65□□□□□ -0.7
PPP4R1-202ENST00000400555 C1QTNF9BB2RNN3 333 aa10.65□□□□□ -0.7
PPP4R1-202ENST00000400555 PTBP3O95758 552 aaKnown RBP10.65□□□□□ -0.7
PPP4R1-202ENST00000400555 CDX1P47902 265 aaPredicted RBP10.65□□□□□ -0.7
PPP4R1-202ENST00000400555 GNG10P50151 68 aa10.65□□□□□ -0.7
PPP4R1-202ENST00000400555 MEF2BQ02080 365 aaPredicted RBP10.65□□□□□ -0.7
PPP4R1-202ENST00000400555 DEFB109BQ30KR1 87 aa10.65□□□□□ -0.7
PPP4R1-202ENST00000400555 MRGPRGQ86SM5 289 aa10.65□□□□□ -0.7
PPP4R1-202ENST00000400555 ACTR3CQ9C0K3 210 aaPredicted RBP10.65□□□□□ -0.7
PPP4R1-202ENST00000400555 COL6A6A6NMZ7 2263 aa10.65□□□□□ -0.71
PPP4R1-202ENST00000400555 DUXBA0A1W2PPF3 345 aa10.64□□□□□ -0.71
PPP4R1-202ENST00000400555 M0R1B8 84 aa10.64□□□□□ -0.71
PPP4R1-202ENST00000400555 COX5AP20674 150 aa10.64□□□□□ -0.71
PPP4R1-202ENST00000400555 HOXA5P20719 270 aa10.64□□□□□ -0.71
PPP4R1-202ENST00000400555 LRRC75BQ2VPJ9 315 aa10.64□□□□□ -0.71
PPP4R1-202ENST00000400555 MRPL41Q8IXM3 137 aaKnown RBP10.64□□□□□ -0.71
PPP4R1-202ENST00000400555 ABHD12Q8N2K0 398 aa10.64□□□□□ -0.71
PPP4R1-202ENST00000400555 GTF3AQ92664 365 aaKnown RBP10.64□□□□□ -0.71
PPP4R1-202ENST00000400555 EGLN1Q9GZT9 426 aa10.64□□□□□ -0.71
PPP4R1-202ENST00000400555 GCM1Q9NP62 436 aa10.64□□□□□ -0.71
PPP4R1-202ENST00000400555 CFAP47Q6ZTR5 3102 aa10.64□□□□□ -0.71
PPP4R1-202ENST00000400555 FOXF2Q12947 444 aa10.64□□□□□ -0.71
PPP4R1-202ENST00000400555 RPL39P5Q59GN2 51 aa10.64□□□□□ -0.71
PPP4R1-202ENST00000400555 FAM90A2PQ658T7 463 aa10.64□□□□□ -0.71
PPP4R1-202ENST00000400555 ZNF497Q6ZNH5 498 aa10.64□□□□□ -0.71
PPP4R1-202ENST00000400555 SLC35E3Q7Z769 313 aa10.64□□□□□ -0.71
PPP4R1-202ENST00000400555 PACRGQ96M98 296 aaPredicted RBP10.64□□□□□ -0.71
PPP4R1-202ENST00000400555 OTOGLQ3ZCN5 2332 aa10.64□□□□□ -0.71
PPP4R1-202ENST00000400555 KRTAP27-1Q3LI81 207 aa10.64□□□□□ -0.71
PPP4R1-202ENST00000400555 FAM78BQ5VT40 261 aa10.64□□□□□ -0.71
PPP4R1-202ENST00000400555 FDCSPQ8NFU4 85 aa10.64□□□□□ -0.71
PPP4R1-202ENST00000400555 MEGF10Q96KG7 1140 aa10.64□□□□□ -0.71
PPP4R1-202ENST00000400555 PKIBQ9C010 78 aa10.64□□□□□ -0.71
PPP4R1-202ENST00000400555 XKRY2A2RUG3 117 aa10.63□□□□□ -0.71
PPP4R1-202ENST00000400555 NDUFS6O75380 124 aaKnown RBP10.63□□□□□ -0.71
PPP4R1-202ENST00000400555 IGHV2-5P01817 119 aa10.63□□□□□ -0.71
PPP4R1-202ENST00000400555 COX5BP10606 129 aa10.63□□□□□ -0.71
PPP4R1-202ENST00000400555 SELLP14151 372 aa10.63□□□□□ -0.71
PPP4R1-202ENST00000400555 ABHD5Q8WTS1 349 aa10.63□□□□□ -0.71
PPP4R1-202ENST00000400555 R3HDM4Q96D70 268 aa10.63□□□□□ -0.71
PPP4R1-202ENST00000400555 QTRT1Q9BXR0 403 aaKnown RBP10.63□□□□□ -0.71
PPP4R1-202ENST00000400555 PARLQ9H300 379 aa10.63□□□□□ -0.71
PPP4R1-202ENST00000400555 ZNF320A2RRD8 509 aa10.63□□□□□ -0.71
PPP4R1-202ENST00000400555 THBS3P49746 956 aa10.63□□□□□ -0.71
PPP4R1-202ENST00000400555 ERVK-16P61578 105 aa10.63□□□□□ -0.71
PPP4R1-202ENST00000400555 S100A12P80511 92 aa10.63□□□□□ -0.71
PPP4R1-202ENST00000400555 ZGRF1Q86YA3 2104 aa10.63□□□□□ -0.71
PPP4R1-202ENST00000400555 ZNF295-AS1Q8N0V1 137 aa10.63□□□□□ -0.71
PPP4R1-202ENST00000400555 DEFB124Q8NES8 71 aa10.63□□□□□ -0.71
PPP4R1-202ENST00000400555 C11orf94C9JXX5 98 aa10.63□□□□□ -0.71
PPP4R1-202ENST00000400555 CYB5R3P00387 301 aaPredicted RBP10.63□□□□□ -0.71
PPP4R1-202ENST00000400555 ZNF718Q3SXZ3 478 aa10.63□□□□□ -0.71
PPP4R1-202ENST00000400555 MOB1BQ7L9L4 216 aa10.63□□□□□ -0.71
PPP4R1-202ENST00000400555 Q8IYB0 196 aa10.63□□□□□ -0.71
PPP4R1-202ENST00000400555 PINX1Q96BK5 328 aaKnown RBP10.63□□□□□ -0.71
PPP4R1-202ENST00000400555 ZFHX4Q86UP3 3567 aa10.63□□□□□ -0.71
PPP4R1-202ENST00000400555 LRRC30A6NM36 301 aa10.62□□□□□ -0.71
PPP4R1-202ENST00000400555 SEC14L6B5MCN3 397 aa10.62□□□□□ -0.71
PPP4R1-202ENST00000400555 C21orf140B9A014 251 aa10.62□□□□□ -0.71
PPP4R1-202ENST00000400555 DVL1O14640 695 aa10.62□□□□□ -0.71
PPP4R1-202ENST00000400555 NDUFB4O95168 129 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms