RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 LDLRAD4O15165 306 aa10.9□□□□□ -0.66
SHOX-202ENST00000381575 APOA2P02652 100 aa10.9□□□□□ -0.66
SHOX-202ENST00000381575 TRGV3P03979 118 aa10.9□□□□□ -0.66
SHOX-202ENST00000381575 SSBP2P81877 361 aaPredicted RBP10.9□□□□□ -0.66
SHOX-202ENST00000381575 TMEM267Q0VDI3 215 aaPredicted RBP10.9□□□□□ -0.66
SHOX-202ENST00000381575 TRAM1Q15629 374 aa10.9□□□□□ -0.66
SHOX-202ENST00000381575 SSX1Q16384 188 aa10.9□□□□□ -0.66
SHOX-202ENST00000381575 CD200R1LQ6Q8B3 271 aa10.9□□□□□ -0.66
SHOX-202ENST00000381575 PRSS48Q7RTY5 328 aa10.9□□□□□ -0.66
SHOX-202ENST00000381575 ZNF429Q86V71 674 aa10.9□□□□□ -0.66
SHOX-202ENST00000381575 TCTEX1D1Q8N7M0 179 aa10.9□□□□□ -0.66
SHOX-202ENST00000381575 OR56B1Q8NGI3 324 aa10.9□□□□□ -0.66
SHOX-202ENST00000381575 TSNAXQ99598 290 aaKnown RBP10.9□□□□□ -0.66
SHOX-202ENST00000381575 OR2D2Q9H210 308 aa10.9□□□□□ -0.66
SHOX-202ENST00000381575 ZNF355PQ9NSJ1 428 aa10.9□□□□□ -0.66
SHOX-202ENST00000381575 SLC35D1Q9NTN3 355 aa10.9□□□□□ -0.66
SHOX-202ENST00000381575 ZNF230Q9UIE0 474 aaPredicted RBP10.9□□□□□ -0.66
SHOX-202ENST00000381575 MGAT4AQ9UM21 535 aa10.9□□□□□ -0.66
SHOX-202ENST00000381575 SMAD5-AS1Q9Y6J3 95 aa10.9□□□□□ -0.66
SHOX-202ENST00000381575 V9GY05 133 aa10.9□□□□□ -0.66
SHOX-202ENST00000381575 SMIM30A4D0T7 59 aa10.9□□□□□ -0.67
SHOX-202ENST00000381575 TRIM64CA6NLI5 447 aa10.9□□□□□ -0.67
SHOX-202ENST00000381575 FABP7O15540 132 aa10.9□□□□□ -0.67
SHOX-202ENST00000381575 FCGR3AP08637 254 aa10.9□□□□□ -0.67
SHOX-202ENST00000381575 OR8U9P0C7N5 309 aa10.9□□□□□ -0.67
SHOX-202ENST00000381575 GSTT2P0CG29 244 aa10.9□□□□□ -0.67
SHOX-202ENST00000381575 GSTT2BP0CG30 244 aa10.9□□□□□ -0.67
SHOX-202ENST00000381575 APELAP0DMC3 54 aa10.9□□□□□ -0.67
SHOX-202ENST00000381575 GNB3P16520 340 aa10.9□□□□□ -0.67
SHOX-202ENST00000381575 PSMA1P25786 263 aaKnown RBP10.9□□□□□ -0.67
SHOX-202ENST00000381575 FXYD3Q14802 87 aa10.9□□□□□ -0.67
SHOX-202ENST00000381575 AKIRIN2Q53H80 203 aa10.9□□□□□ -0.67
SHOX-202ENST00000381575 ZNF562Q6V9R5 426 aa10.9□□□□□ -0.67
SHOX-202ENST00000381575 SBSPONQ8IVN8 264 aa10.9□□□□□ -0.67
SHOX-202ENST00000381575 OR5T1Q8NG75 326 aa10.9□□□□□ -0.67
SHOX-202ENST00000381575 CNBD2Q96M20 576 aa10.9□□□□□ -0.67
SHOX-202ENST00000381575 SPDEFO95238 335 aa10.89□□□□□ -0.67
SHOX-202ENST00000381575 IGLV2-23P01705 113 aa10.89□□□□□ -0.67
SHOX-202ENST00000381575 GP9P14770 177 aa10.89□□□□□ -0.67
SHOX-202ENST00000381575 MRPS15P82914 257 aaKnown RBP10.89□□□□□ -0.67
SHOX-202ENST00000381575 PITPNAQ00169 270 aa10.89□□□□□ -0.67
SHOX-202ENST00000381575 SRSF7Q16629 238 aaKnown RBP eCLIP10.89□□□□□ -0.67
SHOX-202ENST00000381575 PYHIN1Q6K0P9 492 aa10.89□□□□□ -0.67
SHOX-202ENST00000381575 ACSM6Q6P461 480 aa10.89□□□□□ -0.67
SHOX-202ENST00000381575 IZUMO2Q6UXV1 221 aa10.89□□□□□ -0.67
SHOX-202ENST00000381575 PDPNQ86YL7 162 aa10.89□□□□□ -0.67
SHOX-202ENST00000381575 FLYWCH2Q96CP2 140 aaKnown RBP10.89□□□□□ -0.67
SHOX-202ENST00000381575 RAB3CQ96E17 227 aa10.89□□□□□ -0.67
SHOX-202ENST00000381575 RNF5Q99942 180 aa10.89□□□□□ -0.67
SHOX-202ENST00000381575 GHITMQ9H3K2 345 aa10.89□□□□□ -0.67
SHOX-202ENST00000381575 SDHAF2Q9NX18 166 aa10.89□□□□□ -0.67
SHOX-202ENST00000381575 ELF5Q9UKW6 265 aaPredicted RBP10.89□□□□□ -0.67
SHOX-202ENST00000381575 RAB22AQ9UL26 194 aa10.89□□□□□ -0.67
SHOX-202ENST00000381575 TENM2Q9NT68 2774 aa10.89□□□□□ -0.67
SHOX-202ENST00000381575 ANKRD34BA5PLL1 514 aa10.88□□□□□ -0.67
SHOX-202ENST00000381575 CNIH1O95406 144 aa10.88□□□□□ -0.67
SHOX-202ENST00000381575 HSPB1P04792 205 aaKnown RBP10.88□□□□□ -0.67
SHOX-202ENST00000381575 OR4A4PQ8NGN8 299 aa10.88□□□□□ -0.67
SHOX-202ENST00000381575 RHOVQ96L33 236 aa10.88□□□□□ -0.67
SHOX-202ENST00000381575 CABLES2Q9BTV7 478 aa10.88□□□□□ -0.67
SHOX-202ENST00000381575 RSRP1Q9BUV0 290 aa10.88□□□□□ -0.67
SHOX-202ENST00000381575 ACOT13Q9NPJ3 140 aa10.88□□□□□ -0.67
SHOX-202ENST00000381575 IGKV1D-8A0A087WSZ0 117 aa10.87□□□□□ -0.67
SHOX-202ENST00000381575 J3QRK9 145 aa10.87□□□□□ -0.67
SHOX-202ENST00000381575 MFNGO00587 321 aa10.87□□□□□ -0.67
SHOX-202ENST00000381575 FRMD6-AS1P0C7T7 363 aa10.87□□□□□ -0.67
SHOX-202ENST00000381575 TBCEQ15813 527 aaPredicted RBP10.87□□□□□ -0.67
SHOX-202ENST00000381575 ZNF367Q7RTV3 350 aa10.87□□□□□ -0.67
SHOX-202ENST00000381575 POC5Q8NA72 575 aa10.87□□□□□ -0.67
SHOX-202ENST00000381575 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.87□□□□□ -0.67
SHOX-202ENST00000381575 BVESQ8NE79 360 aa10.87□□□□□ -0.67
SHOX-202ENST00000381575 OR6Q1Q8NGQ2 317 aa10.87□□□□□ -0.67
SHOX-202ENST00000381575 OR10R2Q8NGX6 335 aa10.87□□□□□ -0.67
SHOX-202ENST00000381575 OR10J5Q8NHC4 309 aa10.87□□□□□ -0.67
SHOX-202ENST00000381575 HARBI1Q96MB7 349 aa10.87□□□□□ -0.67
SHOX-202ENST00000381575 OR4C12Q96R67 309 aa10.87□□□□□ -0.67
SHOX-202ENST00000381575 ADAM30Q9UKF2 790 aa10.87□□□□□ -0.67
SHOX-202ENST00000381575 TRBV6-7A0A0A0MS04 114 aa10.86□□□□□ -0.67
SHOX-202ENST00000381575 C13orf42A0A1B0GVH6 325 aa10.86□□□□□ -0.67
SHOX-202ENST00000381575 SRRM4A7MD48 611 aaKnown RBP10.86□□□□□ -0.67
SHOX-202ENST00000381575 RAB27BO00194 218 aa10.86□□□□□ -0.67
SHOX-202ENST00000381575 CRYGBP07316 175 aa10.86□□□□□ -0.67
SHOX-202ENST00000381575 HIST1H1DP16402 221 aaKnown RBP10.86□□□□□ -0.67
SHOX-202ENST00000381575 CD40LGP29965 261 aa10.86□□□□□ -0.67
SHOX-202ENST00000381575 IDO2Q6ZQW0 420 aa10.86□□□□□ -0.67
SHOX-202ENST00000381575 NR2C2APQ86WQ0 139 aa10.86□□□□□ -0.67
SHOX-202ENST00000381575 RCHY1Q96PM5 261 aa10.86□□□□□ -0.67
SHOX-202ENST00000381575 SLA2Q9H6Q3 261 aa10.86□□□□□ -0.67
SHOX-202ENST00000381575 RBM7Q9Y580 266 aaKnown RBP10.86□□□□□ -0.67
SHOX-202ENST00000381575 CSMD3Q7Z407 3707 aa10.85□□□□□ -0.67
SHOX-202ENST00000381575 IFITM5A6NNB3 132 aa10.85□□□□□ -0.67
SHOX-202ENST00000381575 PDCD5O14737 125 aa10.85□□□□□ -0.67
SHOX-202ENST00000381575 SHOXO15266 292 aa10.85□□□□□ -0.67
SHOX-202ENST00000381575 RBMXL2O75526 392 aaKnown RBP10.85□□□□□ -0.67
SHOX-202ENST00000381575 TRBV12-3P01733 135 aa10.85□□□□□ -0.67
SHOX-202ENST00000381575 GADD45AP24522 165 aa10.85□□□□□ -0.67
SHOX-202ENST00000381575 MYL9P24844 172 aa10.85□□□□□ -0.67
SHOX-202ENST00000381575 SERPINB10P48595 397 aa10.85□□□□□ -0.67
SHOX-202ENST00000381575 ARFRP1Q13795 201 aa10.85□□□□□ -0.67
SHOX-202ENST00000381575 MRGPRG-AS1Q2M3A8 158 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms