RNA–Protein interactions for RNA: ENST00000380996.9

TSSC4-203, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSSC4, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-203ENST00000380996 RPEQ96AT9 228 aa16.6■□□□□ 0.25
TSSC4-203ENST00000380996 CCDC168Q8NDH2 2452 aa16.59■□□□□ 0.25
TSSC4-203ENST00000380996 HMX3A6NHT5 357 aa16.59■□□□□ 0.25
TSSC4-203ENST00000380996 LINC00473A8K010 186 aa16.59■□□□□ 0.25
TSSC4-203ENST00000380996 SPAG16Q8N0X2 631 aa16.59■□□□□ 0.25
TSSC4-203ENST00000380996 TBL2Q9Y4P3 447 aaKnown RBP16.59■□□□□ 0.25
TSSC4-203ENST00000380996 LY6LH3BQJ8 138 aa16.58■□□□□ 0.24
TSSC4-203ENST00000380996 SMAD7O15105 426 aaKnown RBP16.58■□□□□ 0.24
TSSC4-203ENST00000380996 TRAPPC2P0DI81 140 aa16.58■□□□□ 0.24
TSSC4-203ENST00000380996 TRAPPC2BP0DI82 140 aa16.58■□□□□ 0.24
TSSC4-203ENST00000380996 CT45A6P0DMU7 189 aa16.58■□□□□ 0.24
TSSC4-203ENST00000380996 CT45A5P0DMU8 189 aa16.58■□□□□ 0.24
TSSC4-203ENST00000380996 CT45A7P0DMV0 189 aa16.58■□□□□ 0.24
TSSC4-203ENST00000380996 RPA2P15927 270 aa16.58■□□□□ 0.24
TSSC4-203ENST00000380996 MIDNQ504T8 468 aa16.58■□□□□ 0.24
TSSC4-203ENST00000380996 ZNF695Q8IW36 515 aa16.58■□□□□ 0.24
TSSC4-203ENST00000380996 CIARTQ8N365 385 aaPredicted RBP16.58■□□□□ 0.24
TSSC4-203ENST00000380996 LRTM2Q8N967 370 aa16.58■□□□□ 0.24
TSSC4-203ENST00000380996 TMEM56Q96MV1 263 aa16.58■□□□□ 0.24
TSSC4-203ENST00000380996 TMEM56-RWDD3S4R434 201 aa16.58■□□□□ 0.24
TSSC4-203ENST00000380996 MAP1AP78559 2803 aaPredicted RBP16.58■□□□□ 0.24
TSSC4-203ENST00000380996 ABCA2Q9BZC7 2435 aa16.57■□□□□ 0.24
TSSC4-203ENST00000380996 CENPVL3A0A0U1RRI6 287 aa16.57■□□□□ 0.24
TSSC4-203ENST00000380996 A0A1W2PRD5 423 aa16.57■□□□□ 0.24
TSSC4-203ENST00000380996 A0A1W2PRF3 423 aa16.57■□□□□ 0.24
TSSC4-203ENST00000380996 A0A1W2PRM7 423 aa16.57■□□□□ 0.24
TSSC4-203ENST00000380996 CDS2O95674 445 aa16.57■□□□□ 0.24
TSSC4-203ENST00000380996 REG1BP48304 166 aa16.57■□□□□ 0.24
TSSC4-203ENST00000380996 ZNF816Q0VGE8 651 aaPredicted RBP16.57■□□□□ 0.24
TSSC4-203ENST00000380996 TPTE2P1Q5T6R2 138 aa16.57■□□□□ 0.24
TSSC4-203ENST00000380996 GPR157Q5UAW9 335 aa16.57■□□□□ 0.24
TSSC4-203ENST00000380996 LIN54Q6MZP7 749 aa16.57■□□□□ 0.24
TSSC4-203ENST00000380996 CHAC2Q8WUX2 184 aa16.57■□□□□ 0.24
TSSC4-203ENST00000380996 IL22RA2Q969J5 263 aa16.57■□□□□ 0.24
TSSC4-203ENST00000380996 MRPL20Q9BYC9 149 aaKnown RBP16.57■□□□□ 0.24
TSSC4-203ENST00000380996 PRR13Q9NZ81 148 aa16.57■□□□□ 0.24
TSSC4-203ENST00000380996 VPS13CQ709C8 3753 aa16.57■□□□□ 0.24
TSSC4-203ENST00000380996 WNK2Q9Y3S1 2297 aa16.57■□□□□ 0.24
TSSC4-203ENST00000380996 OOSP1A8MZH6 123 aa16.56■□□□□ 0.24
TSSC4-203ENST00000380996 RBFOX2O43251 390 aaKnown RBP eCLIP16.56■□□□□ 0.24
TSSC4-203ENST00000380996 APOA2P02652 100 aa16.56■□□□□ 0.24
TSSC4-203ENST00000380996 RRASP10301 218 aa16.56■□□□□ 0.24
TSSC4-203ENST00000380996 LINC00205P59089 165 aa16.56■□□□□ 0.24
TSSC4-203ENST00000380996 RTL8BQ17RB0 113 aa16.56■□□□□ 0.24
TSSC4-203ENST00000380996 OR2B11Q5JQS5 317 aa16.56■□□□□ 0.24
TSSC4-203ENST00000380996 CCDC144NLQ6NUI1 221 aa16.56■□□□□ 0.24
TSSC4-203ENST00000380996 ZNF383Q8NA42 475 aa16.56■□□□□ 0.24
TSSC4-203ENST00000380996 DDB2Q92466 427 aa16.56■□□□□ 0.24
TSSC4-203ENST00000380996 NABP2Q9BQ15 211 aa16.56■□□□□ 0.24
TSSC4-203ENST00000380996 CREBBPQ92793 2442 aa16.55■□□□□ 0.24
TSSC4-203ENST00000380996 IGHV1-69DA0A0B4J2H0 117 aa16.55■□□□□ 0.24
TSSC4-203ENST00000380996 DBX1A6NMT0 343 aa16.55■□□□□ 0.24
TSSC4-203ENST00000380996 NPFFO15130 113 aa16.55■□□□□ 0.24
TSSC4-203ENST00000380996 FCGR3BO75015 233 aa16.55■□□□□ 0.24
TSSC4-203ENST00000380996 ATG12O94817 140 aa16.55■□□□□ 0.24
TSSC4-203ENST00000380996 IGHV1-69P01742 117 aa16.55■□□□□ 0.24
TSSC4-203ENST00000380996 LPAR6P43657 344 aa16.55■□□□□ 0.24
TSSC4-203ENST00000380996 DIAPH2-AS1Q14236 149 aa16.55■□□□□ 0.24
TSSC4-203ENST00000380996 FCN2Q15485 313 aa16.55■□□□□ 0.24
TSSC4-203ENST00000380996 ZNF585BQ52M93 769 aa16.55■□□□□ 0.24
TSSC4-203ENST00000380996 TMEM268Q5VZI3 342 aa16.55■□□□□ 0.24
TSSC4-203ENST00000380996 OR4S2Q8NH73 311 aa16.55■□□□□ 0.24
TSSC4-203ENST00000380996 RBPMSQ93062 196 aaKnown RBP16.55■□□□□ 0.24
TSSC4-203ENST00000380996 RAB18Q9NP72 206 aa16.55■□□□□ 0.24
TSSC4-203ENST00000380996 MGAT4CQ9UBM8 478 aa16.55■□□□□ 0.24
TSSC4-203ENST00000380996 TRAV40A0A0B4J280 105 aa16.55■□□□□ 0.24
TSSC4-203ENST00000380996 DUXBA0A1W2PPF3 345 aa16.55■□□□□ 0.24
TSSC4-203ENST00000380996 IFNA21P01568 189 aa16.55■□□□□ 0.24
TSSC4-203ENST00000380996 SULT1A3P0DMM9 295 aa16.55■□□□□ 0.24
TSSC4-203ENST00000380996 SULT1A4P0DMN0 295 aa16.55■□□□□ 0.24
TSSC4-203ENST00000380996 MC5RP33032 325 aa16.55■□□□□ 0.24
TSSC4-203ENST00000380996 LHFPL4Q7Z7J7 247 aa16.55■□□□□ 0.24
TSSC4-203ENST00000380996 OR8H3Q8N146 312 aa16.55■□□□□ 0.24
TSSC4-203ENST00000380996 OR5AN1Q8NGI8 311 aa16.55■□□□□ 0.24
TSSC4-203ENST00000380996 MALSU1Q96EH3 234 aa16.55■□□□□ 0.24
TSSC4-203ENST00000380996 SLC35D1Q9NTN3 355 aa16.55■□□□□ 0.24
TSSC4-203ENST00000380996 IGHV1-3A0A0C4DH29 117 aa16.54■□□□□ 0.24
TSSC4-203ENST00000380996 RAMP3O60896 148 aa16.54■□□□□ 0.24
TSSC4-203ENST00000380996 HPRT1P00492 218 aa16.54■□□□□ 0.24
TSSC4-203ENST00000380996 HLA-GP17693 338 aa16.54■□□□□ 0.24
TSSC4-203ENST00000380996 SAA4P35542 130 aa16.54■□□□□ 0.24
TSSC4-203ENST00000380996 RAB13P51153 203 aa16.54■□□□□ 0.24
TSSC4-203ENST00000380996 BRWD1-AS2P59051 145 aa16.54■□□□□ 0.24
TSSC4-203ENST00000380996 DHRS7BQ6IAN0 325 aaPredicted RBP16.54■□□□□ 0.24
TSSC4-203ENST00000380996 SELENOHQ8IZQ5 122 aaKnown RBP16.54■□□□□ 0.24
TSSC4-203ENST00000380996 C18orf12Q96KH6 178 aa16.54■□□□□ 0.24
TSSC4-203ENST00000380996 PLEKHA2Q9HB19 425 aa16.54■□□□□ 0.24
TSSC4-203ENST00000380996 HILPDAQ9Y5L2 63 aa16.54■□□□□ 0.24
TSSC4-203ENST00000380996 H0YJW9 148 aa16.53■□□□□ 0.24
TSSC4-203ENST00000380996 GOSR2O14653 212 aa16.53■□□□□ 0.24
TSSC4-203ENST00000380996 HOXB5P09067 269 aa16.53■□□□□ 0.24
TSSC4-203ENST00000380996 ARHGDIBP52566 201 aa16.53■□□□□ 0.24
TSSC4-203ENST00000380996 BPIFB3P59826 476 aa16.53■□□□□ 0.24
TSSC4-203ENST00000380996 LDLRAD2Q5SZI1 272 aa16.53■□□□□ 0.24
TSSC4-203ENST00000380996 MOB3BQ86TA1 216 aa16.53■□□□□ 0.24
TSSC4-203ENST00000380996 LHFPL5Q8TAF8 219 aa16.53■□□□□ 0.24
TSSC4-203ENST00000380996 TMED3Q9Y3Q3 217 aa16.53■□□□□ 0.24
TSSC4-203ENST00000380996 CR1P17927 2039 aa16.52■□□□□ 0.24
TSSC4-203ENST00000380996 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.52■□□□□ 0.242e-10■■■■■ 39.2
TSSC4-203ENST00000380996 A8MV72 311 aaPredicted RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms