RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 PMCHP20382 165 aa13.21□□□□□ -0.29
CSNK1A1-202ENST00000377843 SRSF7Q16629 238 aaKnown RBP eCLIP13.21□□□□□ -0.29
CSNK1A1-202ENST00000377843 ZIC4Q8N9L1 334 aa13.21□□□□□ -0.29
CSNK1A1-202ENST00000377843 OR10G8Q8NGN5 311 aa13.21□□□□□ -0.29
CSNK1A1-202ENST00000377843 FER1L5A0AVI2 2057 aa13.21□□□□□ -0.29
CSNK1A1-202ENST00000377843 EXPH5Q8NEV8 1989 aa13.21□□□□□ -0.3
CSNK1A1-202ENST00000377843 PMS2P5A8MQ11 134 aa13.21□□□□□ -0.3
CSNK1A1-202ENST00000377843 K7EN84 100 aa13.21□□□□□ -0.3
CSNK1A1-202ENST00000377843 PDE6DO43924 150 aa13.21□□□□□ -0.3
CSNK1A1-202ENST00000377843 MMP23AO75900 390 aa13.21□□□□□ -0.3
CSNK1A1-202ENST00000377843 C3orf79P0CE67 100 aa13.21□□□□□ -0.3
CSNK1A1-202ENST00000377843 SPINK2P20155 84 aa13.21□□□□□ -0.3
CSNK1A1-202ENST00000377843 COX5AP20674 150 aa13.21□□□□□ -0.3
CSNK1A1-202ENST00000377843 COL8A2P25067 703 aa13.21□□□□□ -0.3
CSNK1A1-202ENST00000377843 AMTP48728 403 aa13.21□□□□□ -0.3
CSNK1A1-202ENST00000377843 OR1F12Q8NHA8 337 aa13.21□□□□□ -0.3
CSNK1A1-202ENST00000377843 APOBEC3DQ96AK3 386 aaPredicted RBP13.21□□□□□ -0.3
CSNK1A1-202ENST00000377843 PRDM6Q9NQX0 595 aa13.21□□□□□ -0.3
CSNK1A1-202ENST00000377843 KIR2DS1A0A191URI9 304 aa13.2□□□□□ -0.3
CSNK1A1-202ENST00000377843 A0A1W2PS18 150 aa13.2□□□□□ -0.3
CSNK1A1-202ENST00000377843 SNURFLB1AK76 121 aa13.2□□□□□ -0.3
CSNK1A1-202ENST00000377843 SERPINA7P05543 415 aa13.2□□□□□ -0.3
CSNK1A1-202ENST00000377843 GABRG2P18507 467 aa13.2□□□□□ -0.3
CSNK1A1-202ENST00000377843 KIR2DS4P43632 304 aa13.2□□□□□ -0.3
CSNK1A1-202ENST00000377843 ZNF83P51522 516 aa13.2□□□□□ -0.3
CSNK1A1-202ENST00000377843 KIR2DS1Q14954 304 aa13.2□□□□□ -0.3
CSNK1A1-202ENST00000377843 KIAA1644Q3SXP7 199 aa13.2□□□□□ -0.3
CSNK1A1-202ENST00000377843 FAM27BQ5VT28 67 aa13.2□□□□□ -0.3
CSNK1A1-202ENST00000377843 NIT1Q86X76 327 aa13.2□□□□□ -0.3
CSNK1A1-202ENST00000377843 NFAM1Q8NET5 270 aaPredicted RBP13.2□□□□□ -0.3
CSNK1A1-202ENST00000377843 ULBP2Q9BZM5 246 aa13.2□□□□□ -0.3
CSNK1A1-202ENST00000377843 METTL7AQ9H8H3 244 aa13.2□□□□□ -0.3
CSNK1A1-202ENST00000377843 CLN8Q9UBY8 286 aa13.2□□□□□ -0.3
CSNK1A1-202ENST00000377843 TP73-AS1Q9UF72 201 aa13.2□□□□□ -0.3
CSNK1A1-202ENST00000377843 SCO2A0A1W2PP80 73 aa13.2□□□□□ -0.3
CSNK1A1-202ENST00000377843 ZNF253O75346 499 aa13.2□□□□□ -0.3
CSNK1A1-202ENST00000377843 CDC34P49427 236 aaPredicted RBP13.2□□□□□ -0.3
CSNK1A1-202ENST00000377843 GFRA1P56159 465 aa13.2□□□□□ -0.3
CSNK1A1-202ENST00000377843 FAM69BQ5VUD6 431 aa13.2□□□□□ -0.3
CSNK1A1-202ENST00000377843 LCN12Q6JVE5 192 aa13.2□□□□□ -0.3
CSNK1A1-202ENST00000377843 Q8N7P7 452 aa13.2□□□□□ -0.3
CSNK1A1-202ENST00000377843 TMEM147Q9BVK8 224 aa13.2□□□□□ -0.3
CSNK1A1-202ENST00000377843 IL36BQ9NZH7 164 aa13.2□□□□□ -0.3
CSNK1A1-202ENST00000377843 SIRPB1O00241 398 aa13.19□□□□□ -0.3
CSNK1A1-202ENST00000377843 LGALS4P56470 323 aa13.19□□□□□ -0.3
CSNK1A1-202ENST00000377843 ST6GALNAC3Q8NDV1 305 aa13.19□□□□□ -0.3
CSNK1A1-202ENST00000377843 Q8NFD4 153 aa13.19□□□□□ -0.3
CSNK1A1-202ENST00000377843 FGFBP3Q8TAT2 258 aa13.19□□□□□ -0.3
CSNK1A1-202ENST00000377843 CLDN23Q96B33 292 aa13.19□□□□□ -0.3
CSNK1A1-202ENST00000377843 VPS25Q9BRG1 176 aa13.19□□□□□ -0.3
CSNK1A1-202ENST00000377843 TNFSF11O14788 317 aa13.19□□□□□ -0.3
CSNK1A1-202ENST00000377843 FASLGP48023 281 aa13.19□□□□□ -0.3
CSNK1A1-202ENST00000377843 LDLRAD2Q5SZI1 272 aa13.19□□□□□ -0.3
CSNK1A1-202ENST00000377843 GCNT2Q8N0V5 402 aa13.19□□□□□ -0.3
CSNK1A1-202ENST00000377843 FAM19A2Q8N3H0 131 aa13.19□□□□□ -0.3
CSNK1A1-202ENST00000377843 UBALD1Q8TB05 177 aa13.19□□□□□ -0.3
CSNK1A1-202ENST00000377843 IL1F10Q8WWZ1 152 aa13.19□□□□□ -0.3
CSNK1A1-202ENST00000377843 KCNIP2Q9NS61 270 aa13.19□□□□□ -0.3
CSNK1A1-202ENST00000377843 BET1LQ9NYM9 111 aa13.19□□□□□ -0.3
CSNK1A1-202ENST00000377843 CTXN2P0C2S0 81 aa13.18□□□□□ -0.3
CSNK1A1-202ENST00000377843 ZNF32P17041 273 aa13.18□□□□□ -0.3
CSNK1A1-202ENST00000377843 NUDT10Q8NFP7 164 aa13.18□□□□□ -0.3
CSNK1A1-202ENST00000377843 MRPS16Q9Y3D3 137 aaKnown RBP13.18□□□□□ -0.3
CSNK1A1-202ENST00000377843 IGLV3-32A0A0A0MS00 114 aa13.18□□□□□ -0.3
CSNK1A1-202ENST00000377843 IGHV2-26A0A0B4J1V2 119 aa13.18□□□□□ -0.3
CSNK1A1-202ENST00000377843 DPRXA6NFQ7 191 aa13.18□□□□□ -0.3
CSNK1A1-202ENST00000377843 TNFSF4P23510 183 aa13.18□□□□□ -0.3
CSNK1A1-202ENST00000377843 S100GP29377 79 aa13.18□□□□□ -0.3
CSNK1A1-202ENST00000377843 NTF4P34130 210 aa13.18□□□□□ -0.3
CSNK1A1-202ENST00000377843 OR2M7Q8NG81 312 aa13.18□□□□□ -0.3
CSNK1A1-202ENST00000377843 OR4F17Q8NGA8 305 aa13.18□□□□□ -0.3
CSNK1A1-202ENST00000377843 QTRT1Q9BXR0 403 aaKnown RBP13.18□□□□□ -0.3
CSNK1A1-202ENST00000377843 MTCH1Q9NZJ7 389 aa13.18□□□□□ -0.3
CSNK1A1-202ENST00000377843 HSPB7Q9UBY9 170 aa13.18□□□□□ -0.3
CSNK1A1-202ENST00000377843 SPINK4O60575 86 aa13.17□□□□□ -0.3
CSNK1A1-202ENST00000377843 PRRX1P54821 245 aa13.17□□□□□ -0.3
CSNK1A1-202ENST00000377843 FGFRL1Q8N441 504 aa13.17□□□□□ -0.3
CSNK1A1-202ENST00000377843 OR2D3Q8NGH3 330 aa13.17□□□□□ -0.3
CSNK1A1-202ENST00000377843 KCNS1Q96KK3 526 aa13.17□□□□□ -0.3
CSNK1A1-202ENST00000377843 IGLC7A0M8Q6 106 aa13.17□□□□□ -0.3
CSNK1A1-202ENST00000377843 DEGS1O15121 323 aa13.17□□□□□ -0.3
CSNK1A1-202ENST00000377843 CLDN15P56746 228 aa13.17□□□□□ -0.3
CSNK1A1-202ENST00000377843 FGF12P61328 243 aa13.17□□□□□ -0.3
CSNK1A1-202ENST00000377843 PRAMEF20Q5VT98 475 aa13.17□□□□□ -0.3
CSNK1A1-202ENST00000377843 ZDHHC16Q969W1 377 aa13.17□□□□□ -0.3
CSNK1A1-202ENST00000377843 SFXN3Q9BWM7 321 aa13.17□□□□□ -0.3
CSNK1A1-202ENST00000377843 CST9LQ9H4G1 147 aa13.17□□□□□ -0.3
CSNK1A1-202ENST00000377843 SLC35D1Q9NTN3 355 aa13.17□□□□□ -0.3
CSNK1A1-202ENST00000377843 NPIPA2E9PIF3 369 aa13.16□□□□□ -0.3
CSNK1A1-202ENST00000377843 NPIPA3F8WFD2 350 aa13.16□□□□□ -0.3
CSNK1A1-202ENST00000377843 B4GALT1P15291 398 aa13.16□□□□□ -0.3
CSNK1A1-202ENST00000377843 KRTAP27-1Q3LI81 207 aa13.16□□□□□ -0.3
CSNK1A1-202ENST00000377843 OCIAD2Q56VL3 154 aa13.16□□□□□ -0.3
CSNK1A1-202ENST00000377843 ANKRD37Q7Z713 158 aa13.16□□□□□ -0.3
CSNK1A1-202ENST00000377843 PHF7Q9BWX1 381 aaPredicted RBP13.16□□□□□ -0.3
CSNK1A1-202ENST00000377843 FAM90A10PA6NDY2 464 aa13.16□□□□□ -0.3
CSNK1A1-202ENST00000377843 FAM90A18PA6NE21 464 aa13.16□□□□□ -0.3
CSNK1A1-202ENST00000377843 FAM90A16PA6NEW6 464 aa13.16□□□□□ -0.3
CSNK1A1-202ENST00000377843 LILRA5A6NI73 299 aa13.16□□□□□ -0.3
CSNK1A1-202ENST00000377843 FAM90A20PA6NIJ5 464 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 213 ms