RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 NCR3LG1Q68D85 454 aa7.19□□□□□ -1.26
RFX3-202ENST00000358730 OR13A1Q8NGR1 328 aa7.19□□□□□ -1.26
RFX3-202ENST00000358730 RFESDQ8TAC1 157 aa7.19□□□□□ -1.26
RFX3-202ENST00000358730 RPUSD4Q96CM3 377 aaKnown RBP7.19□□□□□ -1.26
RFX3-202ENST00000358730 TAAR6Q96RI8 345 aa7.19□□□□□ -1.26
RFX3-202ENST00000358730 HEATR1Q9H583 2144 aaKnown RBP7.18□□□□□ -1.26
RFX3-202ENST00000358730 TRAV20A0A0B4J274 112 aa7.18□□□□□ -1.26
RFX3-202ENST00000358730 CTXND1A0A1B0GTU2 59 aa7.18□□□□□ -1.26
RFX3-202ENST00000358730 DEFB108AA8MXU0 73 aa7.18□□□□□ -1.26
RFX3-202ENST00000358730 PPP1R2P9O14990 202 aa7.18□□□□□ -1.26
RFX3-202ENST00000358730 OPN1MWP04001 364 aa7.18□□□□□ -1.26
RFX3-202ENST00000358730 CECR9P0C854 216 aa7.18□□□□□ -1.26
RFX3-202ENST00000358730 OPN1MW2P0DN77 364 aa7.18□□□□□ -1.26
RFX3-202ENST00000358730 OPN1MW3P0DN78 364 aa7.18□□□□□ -1.26
RFX3-202ENST00000358730 LINC00205P59089 165 aa7.18□□□□□ -1.26
RFX3-202ENST00000358730 EDDM3AQ14507 147 aa7.18□□□□□ -1.26
RFX3-202ENST00000358730 ATP6V1FQ16864 119 aa7.18□□□□□ -1.26
RFX3-202ENST00000358730 LTC4SQ16873 150 aa7.18□□□□□ -1.26
RFX3-202ENST00000358730 FFAR4Q5NUL3 377 aa7.18□□□□□ -1.26
RFX3-202ENST00000358730 CENPVQ7Z7K6 275 aaPredicted RBP7.18□□□□□ -1.26
RFX3-202ENST00000358730 OR10G9Q8NGN4 311 aa7.18□□□□□ -1.26
RFX3-202ENST00000358730 OR10G7Q8NGN6 311 aa7.18□□□□□ -1.26
RFX3-202ENST00000358730 NAT8Q9UHE5 227 aa7.18□□□□□ -1.26
RFX3-202ENST00000358730 PSG11Q9UQ72 335 aa7.18□□□□□ -1.26
RFX3-202ENST00000358730 INTS1Q8N201 2190 aaKnown RBP7.18□□□□□ -1.26
RFX3-202ENST00000358730 SVILO95425 2214 aa7.18□□□□□ -1.26
RFX3-202ENST00000358730 MARCH11A6NNE9 402 aa7.18□□□□□ -1.26
RFX3-202ENST00000358730 LINC00473A8K010 186 aa7.18□□□□□ -1.26
RFX3-202ENST00000358730 SEC14L6B5MCN3 397 aa7.18□□□□□ -1.26
RFX3-202ENST00000358730 RAB29O14966 203 aa7.18□□□□□ -1.26
RFX3-202ENST00000358730 WISP2O76076 250 aa7.18□□□□□ -1.26
RFX3-202ENST00000358730 COX5AP20674 150 aa7.18□□□□□ -1.26
RFX3-202ENST00000358730 PSMB3P49720 205 aa7.18□□□□□ -1.26
RFX3-202ENST00000358730 CCL11P51671 97 aa7.18□□□□□ -1.26
RFX3-202ENST00000358730 GUSBP1Q15486 140 aa7.18□□□□□ -1.26
RFX3-202ENST00000358730 C4orf17Q53FE4 359 aa7.18□□□□□ -1.26
RFX3-202ENST00000358730 PYY3Q5JQD4 70 aa7.18□□□□□ -1.26
RFX3-202ENST00000358730 GFI1BQ5VTD9 330 aa7.18□□□□□ -1.26
RFX3-202ENST00000358730 CYP2G1PQ6ZSU1 146 aa7.18□□□□□ -1.26
RFX3-202ENST00000358730 ZNF709Q8N972 641 aa7.18□□□□□ -1.26
RFX3-202ENST00000358730 C9orf106Q8NAJ2 232 aa7.18□□□□□ -1.26
RFX3-202ENST00000358730 PRR7Q8TB68 274 aa7.18□□□□□ -1.26
RFX3-202ENST00000358730 FRZBQ92765 325 aa7.18□□□□□ -1.26
RFX3-202ENST00000358730 CIB3Q96Q77 187 aaPredicted RBP7.18□□□□□ -1.26
RFX3-202ENST00000358730 NPCDR1Q9BY65 106 aa7.18□□□□□ -1.26
RFX3-202ENST00000358730 LAMP3Q9UQV4 416 aa7.18□□□□□ -1.26
RFX3-202ENST00000358730 SPENQ96T58 3664 aaKnown RBP7.18□□□□□ -1.26
RFX3-202ENST00000358730 PTPRBP23467 1997 aa7.18□□□□□ -1.26
RFX3-202ENST00000358730 PMS2P5A8MQ11 134 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 KBTBD11O94819 623 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 IGHV2-70P01814 119 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 IGHG3P01860 377 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 MBP02144 154 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 TRGC1P0CF51 173 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 RD3LP0DJH9 198 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 GCH1P30793 250 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 KIR2DL2P43627 348 aaPredicted RBP7.17□□□□□ -1.26
RFX3-202ENST00000358730 SRSF6Q13247 344 aaKnown RBP7.17□□□□□ -1.26
RFX3-202ENST00000358730 ZNF66Q6ZN08 573 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 WDR31Q8NA23 367 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 FDCSPQ8NFU4 85 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 CTDSP1Q9GZU7 261 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 HCFC1P51610 2035 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 SPINT2O43291 252 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 SOD3P08294 240 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 DEFA4P12838 97 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 MDKP21741 143 aaPredicted RBP7.17□□□□□ -1.26
RFX3-202ENST00000358730 PMS2P11Q13670 270 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 NECAP1Q8NC96 275 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 OR10D4PQ8NGN7 298 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 OR4F5Q8NH21 305 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 ABHD5Q8WTS1 349 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 GATAD1Q8WUU5 269 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 LRRC29Q8WV35 223 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 EDARADDQ8WWZ3 215 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 PLPPR2Q96GM1 343 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 OR4F4Q96R69 305 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 HSD17B10Q99714 261 aaKnown RBP7.17□□□□□ -1.26
RFX3-202ENST00000358730 AGMATQ9BSE5 352 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 DCTN5Q9BTE1 182 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 GPR61Q9BZJ8 451 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 ACTR3CQ9C0K3 210 aaPredicted RBP7.17□□□□□ -1.26
RFX3-202ENST00000358730 PARLQ9H300 379 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 NBEAQ8NFP9 2946 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 TRBV24-1A0A075B6N3 115 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 IFNL4K9M1U5 179 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 NKX2-8O15522 239 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 TGOLN2O43493 480 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 KITLGP21583 273 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 FOXF2Q12947 444 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 TMEM241Q24JQ0 296 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 ZNF718Q3SXZ3 478 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 FAM209BQ5JX69 171 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 C16orf82Q7Z2V1 217 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 HIST3H2BBQ8N257 126 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 TCTEX1D1Q8N7M0 179 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 C1orf162Q8NEQ5 155 aaPredicted RBP7.17□□□□□ -1.26
RFX3-202ENST00000358730 SNX22Q96L94 193 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 LURAP1Q96LR2 239 aa7.17□□□□□ -1.26
RFX3-202ENST00000358730 MRPL37Q9BZE1 423 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms