RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 S100ZQ8WXG8 99 aa17.71■□□□□ 0.42
SHMT1-203ENST00000354098 ATRQ13535 2644 aa17.7■□□□□ 0.42
SHMT1-203ENST00000354098 MOSP00540 346 aa17.7■□□□□ 0.42
SHMT1-203ENST00000354098 LIAT1Q6ZQX7 453 aa17.7■□□□□ 0.42
SHMT1-203ENST00000354098 Q8N6K4 173 aa17.7■□□□□ 0.42
SHMT1-203ENST00000354098 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.7■□□□□ 0.42
SHMT1-203ENST00000354098 ZFAND2BQ8WV99 257 aa17.7■□□□□ 0.42
SHMT1-203ENST00000354098 RBM14Q96PK6 669 aaKnown RBP17.7■□□□□ 0.42
SHMT1-203ENST00000354098 SLC25A33Q9BSK2 321 aa17.7■□□□□ 0.42
SHMT1-203ENST00000354098 HRASLSQ9HDD0 168 aa17.7■□□□□ 0.42
SHMT1-203ENST00000354098 FBN1P35555 2871 aaKnown RBP17.7■□□□□ 0.42
SHMT1-203ENST00000354098 H7C2Y5 167 aa17.69■□□□□ 0.42
SHMT1-203ENST00000354098 OR2F2O95006 317 aa17.69■□□□□ 0.42
SHMT1-203ENST00000354098 ZNF57Q68EA5 555 aaPredicted RBP17.69■□□□□ 0.42
SHMT1-203ENST00000354098 OR51S1Q8NGJ8 323 aa17.69■□□□□ 0.42
SHMT1-203ENST00000354098 TERB2Q8NHR7 220 aa17.69■□□□□ 0.42
SHMT1-203ENST00000354098 DDB2Q92466 427 aa17.69■□□□□ 0.42
SHMT1-203ENST00000354098 MRGPRFQ96AM1 343 aa17.69■□□□□ 0.42
SHMT1-203ENST00000354098 DISC1C4P0D8 188 aa17.68■□□□□ 0.42
SHMT1-203ENST00000354098 IGKV1-16P04430 117 aa17.68■□□□□ 0.42
SHMT1-203ENST00000354098 IL7P13232 177 aa17.68■□□□□ 0.42
SHMT1-203ENST00000354098 MC5RP33032 325 aa17.68■□□□□ 0.42
SHMT1-203ENST00000354098 THBS3P49746 956 aa17.68■□□□□ 0.42
SHMT1-203ENST00000354098 RELBQ01201 579 aa17.68■□□□□ 0.42
SHMT1-203ENST00000354098 TRIQKQ629K1 86 aa17.68■□□□□ 0.42
SHMT1-203ENST00000354098 MCUBQ9NWR8 336 aa17.68■□□□□ 0.42
SHMT1-203ENST00000354098 WASHC3Q9Y3C0 194 aa17.68■□□□□ 0.42
SHMT1-203ENST00000354098 PPP5CP53041 499 aa17.67■□□□□ 0.42
SHMT1-203ENST00000354098 F2RL1P55085 397 aa17.67■□□□□ 0.42
SHMT1-203ENST00000354098 AP3S2P59780 193 aa17.67■□□□□ 0.42
SHMT1-203ENST00000354098 MSMO1Q15800 293 aa17.67■□□□□ 0.42
SHMT1-203ENST00000354098 DHRS7BQ6IAN0 325 aaPredicted RBP17.67■□□□□ 0.42
SHMT1-203ENST00000354098 BVESQ8NE79 360 aa17.67■□□□□ 0.42
SHMT1-203ENST00000354098 AKR1E2Q96JD6 320 aa17.67■□□□□ 0.42
SHMT1-203ENST00000354098 SLC35D1Q9NTN3 355 aa17.67■□□□□ 0.42
SHMT1-203ENST00000354098 C1RLQ9NZP8 487 aa17.67■□□□□ 0.42
SHMT1-203ENST00000354098 LINC00854A0A1B0GVQ3 168 aa17.67■□□□□ 0.42
SHMT1-203ENST00000354098 CRYBA1P05813 215 aa17.67■□□□□ 0.42
SHMT1-203ENST00000354098 CNTFRP26992 372 aa17.67■□□□□ 0.42
SHMT1-203ENST00000354098 UCP3P55916 312 aa17.67■□□□□ 0.42
SHMT1-203ENST00000354098 KCTD9Q7L273 389 aa17.67■□□□□ 0.42
SHMT1-203ENST00000354098 ZBTB34Q8NCN2 500 aa17.67■□□□□ 0.42
SHMT1-203ENST00000354098 HSD17B10Q99714 261 aaKnown RBP17.67■□□□□ 0.42
SHMT1-203ENST00000354098 RSRP1Q9BUV0 290 aa17.67■□□□□ 0.42
SHMT1-203ENST00000354098 RAB18Q9NP72 206 aa17.67■□□□□ 0.42
SHMT1-203ENST00000354098 PLSCR3Q9NRY6 295 aa17.67■□□□□ 0.42
SHMT1-203ENST00000354098 APOA2P02652 100 aa17.66■□□□□ 0.42
SHMT1-203ENST00000354098 AMY1AP04745 511 aa17.66■□□□□ 0.42
SHMT1-203ENST00000354098 INPP1P49441 399 aa17.66■□□□□ 0.42
SHMT1-203ENST00000354098 BLCAPP62952 87 aa17.66■□□□□ 0.42
SHMT1-203ENST00000354098 OR2B11Q5JQS5 317 aa17.66■□□□□ 0.42
SHMT1-203ENST00000354098 MARCH1Q8TCQ1 289 aa17.66■□□□□ 0.42
SHMT1-203ENST00000354098 ADTRPQ96IZ2 230 aa17.66■□□□□ 0.42
SHMT1-203ENST00000354098 SH2D7A6NKC9 451 aaPredicted RBP17.65■□□□□ 0.42
SHMT1-203ENST00000354098 NCBP2LA6PVI3 153 aaKnown RBP17.65■□□□□ 0.42
SHMT1-203ENST00000354098 GPR31O00270 319 aa17.65■□□□□ 0.42
SHMT1-203ENST00000354098 PEX14O75381 377 aa17.65■□□□□ 0.42
SHMT1-203ENST00000354098 PI3P19957 117 aa17.65■□□□□ 0.42
SHMT1-203ENST00000354098 BRWD1-AS2P59051 145 aa17.65■□□□□ 0.42
SHMT1-203ENST00000354098 PHLDA2Q53GA4 152 aa17.65■□□□□ 0.42
SHMT1-203ENST00000354098 LPCAT3Q6P1A2 487 aa17.65■□□□□ 0.42
SHMT1-203ENST00000354098 ZNF66Q6ZN08 573 aa17.65■□□□□ 0.42
SHMT1-203ENST00000354098 IDO2Q6ZQW0 420 aa17.65■□□□□ 0.42
SHMT1-203ENST00000354098 C16orf82Q7Z2V1 217 aa17.65■□□□□ 0.42
SHMT1-203ENST00000354098 OR13C8Q8NGS7 320 aa17.65■□□□□ 0.42
SHMT1-203ENST00000354098 TCTEX1D2Q8WW35 142 aa17.65■□□□□ 0.42
SHMT1-203ENST00000354098 PRRT1Q99946 306 aa17.65■□□□□ 0.42
SHMT1-203ENST00000354098 PGLYRP1O75594 196 aaPredicted RBP17.64■□□□□ 0.42
SHMT1-203ENST00000354098 PGAM2P15259 253 aa17.64■□□□□ 0.42
SHMT1-203ENST00000354098 RPL15P61313 204 aaKnown RBP17.64■□□□□ 0.42
SHMT1-203ENST00000354098 ZNF846Q147U1 533 aa17.64■□□□□ 0.42
SHMT1-203ENST00000354098 Q6ZS46 218 aa17.64■□□□□ 0.42
SHMT1-203ENST00000354098 PDPNQ86YL7 162 aa17.64■□□□□ 0.42
SHMT1-203ENST00000354098 SLC38A6Q8IZM9 456 aa17.64■□□□□ 0.42
SHMT1-203ENST00000354098 BORCS5Q969J3 196 aa17.64■□□□□ 0.42
SHMT1-203ENST00000354098 SLC2A8Q9NY64 477 aa17.64■□□□□ 0.42
SHMT1-203ENST00000354098 MOB4Q9Y3A3 225 aa17.64■□□□□ 0.42
SHMT1-203ENST00000354098 FCGR3BO75015 233 aa17.64■□□□□ 0.41
SHMT1-203ENST00000354098 CD40LGP29965 261 aa17.64■□□□□ 0.41
SHMT1-203ENST00000354098 FAUP35544 74 aaKnown RBP17.64■□□□□ 0.41
SHMT1-203ENST00000354098 Q6ZSV7 163 aa17.64■□□□□ 0.41
SHMT1-203ENST00000354098 CMTM1Q8IZ96 169 aa17.64■□□□□ 0.41
SHMT1-203ENST00000354098 OR51H1Q8NH63 302 aa17.64■□□□□ 0.41
SHMT1-203ENST00000354098 FLYWCH2Q96CP2 140 aaKnown RBP17.64■□□□□ 0.41
SHMT1-203ENST00000354098 CCDC32Q9BV29 185 aa17.64■□□□□ 0.41
SHMT1-203ENST00000354098 WDR12Q9GZL7 423 aaKnown RBP17.64■□□□□ 0.41
SHMT1-203ENST00000354098 RLN1P04808 185 aa17.63■□□□□ 0.41
SHMT1-203ENST00000354098 TAGLNQ01995 201 aaKnown RBP17.63■□□□□ 0.41
SHMT1-203ENST00000354098 MMDQ15546 238 aa17.63■□□□□ 0.41
SHMT1-203ENST00000354098 RTL8BQ17RB0 113 aa17.63■□□□□ 0.41
SHMT1-203ENST00000354098 C11orf88Q6PI97 169 aa17.63■□□□□ 0.41
SHMT1-203ENST00000354098 C5orf56Q8N8D9 126 aa17.63■□□□□ 0.41
SHMT1-203ENST00000354098 Q8N9W7 124 aa17.63■□□□□ 0.41
SHMT1-203ENST00000354098 C19orf24Q9BVV8 132 aa17.63■□□□□ 0.41
SHMT1-203ENST00000354098 NPFFR1Q9GZQ6 430 aa17.63■□□□□ 0.41
SHMT1-203ENST00000354098 SCP2D1Q9UJQ7 156 aa17.63■□□□□ 0.41
SHMT1-203ENST00000354098 PRELID3BQ9Y3B1 194 aa17.63■□□□□ 0.41
SHMT1-203ENST00000354098 CRYZL1O95825 349 aa17.62■□□□□ 0.41
SHMT1-203ENST00000354098 HKR1P10072 659 aa17.62■□□□□ 0.41
SHMT1-203ENST00000354098 RPS16P62249 146 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms