RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 ASCL3Q9NQ33 180 aa12.93□□□□□ -0.34
TNFSF13-202ENST00000349228 CTXND1A0A1B0GTU2 59 aa12.93□□□□□ -0.34
TNFSF13-202ENST00000349228 OR5H1A6NKK0 313 aa12.93□□□□□ -0.34
TNFSF13-202ENST00000349228 CLDN34H7C241 214 aa12.93□□□□□ -0.34
TNFSF13-202ENST00000349228 ZNF737O75373 536 aa12.93□□□□□ -0.34
TNFSF13-202ENST00000349228 KIAA0141Q14154 515 aaPredicted RBP12.93□□□□□ -0.34
TNFSF13-202ENST00000349228 CR1LQ2VPA4 569 aa12.93□□□□□ -0.34
TNFSF13-202ENST00000349228 BHLHA15Q7RTS1 189 aaPredicted RBP12.93□□□□□ -0.34
TNFSF13-202ENST00000349228 Q8WTZ3 238 aa12.93□□□□□ -0.34
TNFSF13-202ENST00000349228 GAB2Q9UQC2 676 aa12.93□□□□□ -0.34
TNFSF13-202ENST00000349228 CFAP54Q96N23 3096 aa12.92□□□□□ -0.34
TNFSF13-202ENST00000349228 KNTC1P50748 2209 aa12.92□□□□□ -0.34
TNFSF13-202ENST00000349228 IGHV1-18A0A0C4DH31 117 aa12.92□□□□□ -0.34
TNFSF13-202ENST00000349228 PMS2P5A8MQ11 134 aa12.92□□□□□ -0.34
TNFSF13-202ENST00000349228 CEBPZOSA8MTT3 80 aa12.92□□□□□ -0.34
TNFSF13-202ENST00000349228 C17orf112F2Z3M2 114 aa12.92□□□□□ -0.34
TNFSF13-202ENST00000349228 TMEM250H0YL14 139 aa12.92□□□□□ -0.34
TNFSF13-202ENST00000349228 C15orf65H3BRN8 121 aa12.92□□□□□ -0.34
TNFSF13-202ENST00000349228 CGAP01215 116 aa12.92□□□□□ -0.34
TNFSF13-202ENST00000349228 FTH1P19P0C7X4 201 aa12.92□□□□□ -0.34
TNFSF13-202ENST00000349228 NQO2P16083 231 aa12.92□□□□□ -0.34
TNFSF13-202ENST00000349228 HOXA5P20719 270 aa12.92□□□□□ -0.34
TNFSF13-202ENST00000349228 BRWD1-AS2P59051 145 aa12.92□□□□□ -0.34
TNFSF13-202ENST00000349228 ESPL1Q14674 2120 aa12.92□□□□□ -0.34
TNFSF13-202ENST00000349228 C3orf36Q3SXR2 165 aa12.92□□□□□ -0.34
TNFSF13-202ENST00000349228 ZNF709Q8N972 641 aa12.92□□□□□ -0.34
TNFSF13-202ENST00000349228 OR13A1Q8NGR1 328 aa12.92□□□□□ -0.34
TNFSF13-202ENST00000349228 LRRC29Q8WV35 223 aa12.92□□□□□ -0.34
TNFSF13-202ENST00000349228 ACTR3CQ9C0K3 210 aaPredicted RBP12.92□□□□□ -0.34
TNFSF13-202ENST00000349228 RAB9BQ9NP90 201 aa12.92□□□□□ -0.34
TNFSF13-202ENST00000349228 MANBALQ9NQG1 85 aa12.92□□□□□ -0.34
TNFSF13-202ENST00000349228 UFSP2Q9NUQ7 469 aa12.92□□□□□ -0.34
TNFSF13-202ENST00000349228 JPT1Q9UK76 154 aa12.92□□□□□ -0.34
TNFSF13-202ENST00000349228 PSMB3P49720 205 aa12.91□□□□□ -0.34
TNFSF13-202ENST00000349228 ODF1Q14990 250 aa12.91□□□□□ -0.34
TNFSF13-202ENST00000349228 RPP25LQ8N5L8 163 aaKnown RBP12.91□□□□□ -0.34
TNFSF13-202ENST00000349228 ZNF610Q8N9Z0 462 aa12.91□□□□□ -0.34
TNFSF13-202ENST00000349228 STARD4Q96DR4 205 aa12.91□□□□□ -0.34
TNFSF13-202ENST00000349228 SNX22Q96L94 193 aa12.91□□□□□ -0.34
TNFSF13-202ENST00000349228 MSL2Q9HCI7 577 aa12.91□□□□□ -0.34
TNFSF13-202ENST00000349228 MED12LQ86YW9 2145 aa12.91□□□□□ -0.34
TNFSF13-202ENST00000349228 MBD3L4A6NDZ8 208 aaPredicted RBP12.91□□□□□ -0.34
TNFSF13-202ENST00000349228 MBD3L3A6NE82 208 aaPredicted RBP12.91□□□□□ -0.34
TNFSF13-202ENST00000349228 MBD3L5A6NJ08 208 aaPredicted RBP12.91□□□□□ -0.34
TNFSF13-202ENST00000349228 SRRM5B3KS81 715 aa12.91□□□□□ -0.34
TNFSF13-202ENST00000349228 MGST3O14880 152 aa12.91□□□□□ -0.34
TNFSF13-202ENST00000349228 RBFOX2O43251 390 aaKnown RBP eCLIP12.91□□□□□ -0.34
TNFSF13-202ENST00000349228 CEACAM4O75871 244 aa12.91□□□□□ -0.34
TNFSF13-202ENST00000349228 TNFSF13O75888 250 aa12.91□□□□□ -0.34
TNFSF13-202ENST00000349228 ELLP55199 621 aaPredicted RBP12.91□□□□□ -0.34
TNFSF13-202ENST00000349228 ZNF674Q2M3X9 581 aa12.91□□□□□ -0.34
TNFSF13-202ENST00000349228 C1orf87Q8N0U7 546 aa12.91□□□□□ -0.34
TNFSF13-202ENST00000349228 CD177Q8N6Q3 437 aa12.91□□□□□ -0.34
TNFSF13-202ENST00000349228 MBD3L2Q8NHZ7 208 aaPredicted RBP12.91□□□□□ -0.34
TNFSF13-202ENST00000349228 CLN8Q9UBY8 286 aa12.91□□□□□ -0.34
TNFSF13-202ENST00000349228 NAT8Q9UHE5 227 aa12.91□□□□□ -0.34
TNFSF13-202ENST00000349228 SLC25A15Q9Y619 301 aa12.91□□□□□ -0.34
TNFSF13-202ENST00000349228 YPEL1O60688 119 aa12.9□□□□□ -0.34
TNFSF13-202ENST00000349228 HPRT1P00492 218 aa12.9□□□□□ -0.34
TNFSF13-202ENST00000349228 FGF7P21781 194 aa12.9□□□□□ -0.34
TNFSF13-202ENST00000349228 FGF8P55075 233 aaPredicted RBP12.9□□□□□ -0.34
TNFSF13-202ENST00000349228 ERVFRD-1P60508 538 aa12.9□□□□□ -0.34
TNFSF13-202ENST00000349228 MEF2BQ02080 365 aaPredicted RBP12.9□□□□□ -0.34
TNFSF13-202ENST00000349228 FOXF2Q12947 444 aa12.9□□□□□ -0.34
TNFSF13-202ENST00000349228 OR2B11Q5JQS5 317 aa12.9□□□□□ -0.34
TNFSF13-202ENST00000349228 SSX7Q7RTT5 188 aa12.9□□□□□ -0.34
TNFSF13-202ENST00000349228 YPEL2Q96QA6 119 aa12.9□□□□□ -0.34
TNFSF13-202ENST00000349228 PSG11Q9UQ72 335 aa12.9□□□□□ -0.34
TNFSF13-202ENST00000349228 GPR179Q6PRD1 2367 aa12.9□□□□□ -0.34
TNFSF13-202ENST00000349228 ITGB1BP1O14713 200 aa12.89□□□□□ -0.35
TNFSF13-202ENST00000349228 CYB5BO43169 146 aa12.89□□□□□ -0.35
TNFSF13-202ENST00000349228 ZG16O60844 167 aa12.89□□□□□ -0.35
TNFSF13-202ENST00000349228 WISP2O76076 250 aa12.89□□□□□ -0.35
TNFSF13-202ENST00000349228 CXCL1P09341 107 aa12.89□□□□□ -0.35
TNFSF13-202ENST00000349228 MDKP21741 143 aaPredicted RBP12.89□□□□□ -0.35
TNFSF13-202ENST00000349228 SSTR5P35346 364 aa12.89□□□□□ -0.35
TNFSF13-202ENST00000349228 KIR2DS2P43631 304 aa12.89□□□□□ -0.35
TNFSF13-202ENST00000349228 GPR12P47775 334 aa12.89□□□□□ -0.35
TNFSF13-202ENST00000349228 C1orf185Q5T7R7 199 aa12.89□□□□□ -0.35
TNFSF13-202ENST00000349228 ZADH2Q8N4Q0 377 aa12.89□□□□□ -0.35
TNFSF13-202ENST00000349228 OR10G9Q8NGN4 311 aa12.89□□□□□ -0.35
TNFSF13-202ENST00000349228 OR10G7Q8NGN6 311 aa12.89□□□□□ -0.35
TNFSF13-202ENST00000349228 OR52E5Q8NH55 327 aa12.89□□□□□ -0.35
TNFSF13-202ENST00000349228 DKK4Q9UBT3 224 aa12.89□□□□□ -0.35
TNFSF13-202ENST00000349228 MARCH11A6NNE9 402 aa12.89□□□□□ -0.35
TNFSF13-202ENST00000349228 GALR2O43603 387 aaPredicted RBP12.89□□□□□ -0.35
TNFSF13-202ENST00000349228 RBMXL2O75526 392 aaKnown RBP12.89□□□□□ -0.35
TNFSF13-202ENST00000349228 CDX1P47902 265 aaPredicted RBP12.89□□□□□ -0.35
TNFSF13-202ENST00000349228 TMEM241Q24JQ0 296 aa12.89□□□□□ -0.35
TNFSF13-202ENST00000349228 TMEM249Q2WGJ8 235 aa12.89□□□□□ -0.35
TNFSF13-202ENST00000349228 WDR25Q64LD2 544 aaPredicted RBP12.89□□□□□ -0.35
TNFSF13-202ENST00000349228 BTNL3Q6UXE8 466 aa12.89□□□□□ -0.35
TNFSF13-202ENST00000349228 CYP2G1PQ6ZSU1 146 aa12.89□□□□□ -0.35
TNFSF13-202ENST00000349228 DEFB124Q8NES8 71 aa12.89□□□□□ -0.35
TNFSF13-202ENST00000349228 NANPQ8TBE9 248 aa12.89□□□□□ -0.35
TNFSF13-202ENST00000349228 R3HDM4Q96D70 268 aa12.89□□□□□ -0.35
TNFSF13-202ENST00000349228 GGACTQ9BVM4 153 aa12.89□□□□□ -0.35
TNFSF13-202ENST00000349228 METRNQ9UJH8 293 aa12.89□□□□□ -0.35
TNFSF13-202ENST00000349228 TRBV24-1A0A075B6N3 115 aa12.88□□□□□ -0.35
TNFSF13-202ENST00000349228 LINC00473A8K010 186 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms